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The map label for this gene is iolB [H]

Identifier: 138895460

GI number: 138895460

Start: 1918167

End: 1918991

Strand: Reverse

Name: iolB [H]

Synonym: GTNG_1808

Alternate gene names: 138895460

Gene position: 1918991-1918167 (Counterclockwise)

Preceding gene: 138895461

Following gene: 138895459

Centisome position: 54.05

GC content: 47.76

Gene sequence:

>825_bases
ATGAGCCGATTCATTATTTCCAGCCATTCGCCGAATGAAGAAGGGAACGTCGTCCGCGTAACGCCGGAATCGGCGGGATG
GGAGTATGTTGGATTTGAAGTGTATGCGTTAACAAAAGGACAAACATTGCGAAAAGAGACGATCGATCAGGAAGCCTGCC
TTGTTCTTCTCAAAGGAAAAGCCAACATACACACAAGACATGAACGGTGGGAAAATATTGGATTGAGAATGGATGTTTTT
GAGAAAATTCCGCCATACTCCGTCTATGTCCCGTCCAATGATGTTTATGAAGTGCAAGCATTGACTGATTTGGAATTGGC
CGTTTGTTTAGCGCCAGGGAAAGGAACGTATCCAGCCCGTTTGATTCCGCCAAGCGAAGTAGGAGTGGAAATGCGCGGGG
CGGGAAACATTGAACGGCGGATACATAATATTCTTCCGGAGTCTAAACCGGCTGACAGTTTGCTTGTCGTTGAGGTATTT
ACGCCGGAAGGAAACTGGTCGAGTTACCCACCGCATAAACATGACCAACACAATTTGCCGCATGAATCTTATTTAGAGGA
AACGTATTATCATCAAATCAATCCGGACCATGGTTTTATGGTGCAACGGGTCTATACTGATGACCGTTCCATTGATGAAA
CGATGGTCGTGAAAAACGGAGATGTTGTTTTGGTGCCGAAAGGCTATCACCCGGTTTCGGCTCCCCCGGGTTATGAGGGG
TATTACTTAAACGTCATGGCCGGGCCCGTACGGACGTGGAAGTTCCGCAATGATCCGGACCATGAGTGGGTGATGGAAAG
CAAACTCGCGGCCAAACAGAAGTAG

Upstream 100 bases:

>100_bases
GAGGCAGAACAGGATCCAGCCATAGCGAATCCGTTTGAATATGCGTTAAAGGCACGCCAATATATTCGTGAAACATGCGG
TTTATAAAGGAGATGAAATG

Downstream 100 bases:

>100_bases
AAACGATCTAAAAAGACGACAGGAAAGAGGCGGTTCGATGAATTTACTCCCATTTGACGAGCAAAAACCGTTGGATTTTA
TCGCTGTCGGCCGACTATGC

Product: putative myo-inositol catabolism protein IolB

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSRFIISSHSPNEEGNVVRVTPESAGWEYVGFEVYALTKGQTLRKETIDQEACLVLLKGKANIHTRHERWENIGLRMDVF
EKIPPYSVYVPSNDVYEVQALTDLELAVCLAPGKGTYPARLIPPSEVGVEMRGAGNIERRIHNILPESKPADSLLVVEVF
TPEGNWSSYPPHKHDQHNLPHESYLEETYYHQINPDHGFMVQRVYTDDRSIDETMVVKNGDVVLVPKGYHPVSAPPGYEG
YYLNVMAGPVRTWKFRNDPDHEWVMESKLAAKQK

Sequences:

>Translated_274_residues
MSRFIISSHSPNEEGNVVRVTPESAGWEYVGFEVYALTKGQTLRKETIDQEACLVLLKGKANIHTRHERWENIGLRMDVF
EKIPPYSVYVPSNDVYEVQALTDLELAVCLAPGKGTYPARLIPPSEVGVEMRGAGNIERRIHNILPESKPADSLLVVEVF
TPEGNWSSYPPHKHDQHNLPHESYLEETYYHQINPDHGFMVQRVYTDDRSIDETMVVKNGDVVLVPKGYHPVSAPPGYEG
YYLNVMAGPVRTWKFRNDPDHEWVMESKLAAKQK
>Mature_273_residues
SRFIISSHSPNEEGNVVRVTPESAGWEYVGFEVYALTKGQTLRKETIDQEACLVLLKGKANIHTRHERWENIGLRMDVFE
KIPPYSVYVPSNDVYEVQALTDLELAVCLAPGKGTYPARLIPPSEVGVEMRGAGNIERRIHNILPESKPADSLLVVEVFT
PEGNWSSYPPHKHDQHNLPHESYLEETYYHQINPDHGFMVQRVYTDDRSIDETMVVKNGDVVLVPKGYHPVSAPPGYEGY
YLNVMAGPVRTWKFRNDPDHEWVMESKLAAKQK

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 31185; Mature: 31053

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFIISSHSPNEEGNVVRVTPESAGWEYVGFEVYALTKGQTLRKETIDQEACLVLLKGK
CCEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHHHCCCCEEEEEEECC
ANIHTRHERWENIGLRMDVFEKIPPYSVYVPSNDVYEVQALTDLELAVCLAPGKGTYPAR
CCCCCHHHHHHHCCCEEEHHHCCCCEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCEE
LIPPSEVGVEMRGAGNIERRIHNILPESKPADSLLVVEVFTPEGNWSSYPPHKHDQHNLP
ECCHHHHCEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
HESYLEETYYHQINPDHGFMVQRVYTDDRSIDETMVVKNGDVVLVPKGYHPVSAPPGYEG
HHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC
YYLNVMAGPVRTWKFRNDPDHEWVMESKLAAKQK
EEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRFIISSHSPNEEGNVVRVTPESAGWEYVGFEVYALTKGQTLRKETIDQEACLVLLKGK
CEEEEECCCCCCCCCEEEECCCCCCCEEEEEEEEEECCCCHHHHHHCCCCEEEEEEECC
ANIHTRHERWENIGLRMDVFEKIPPYSVYVPSNDVYEVQALTDLELAVCLAPGKGTYPAR
CCCCCHHHHHHHCCCEEEHHHCCCCEEEEECCCCEEEEEEECCEEEEEEEECCCCCCCEE
LIPPSEVGVEMRGAGNIERRIHNILPESKPADSLLVVEVFTPEGNWSSYPPHKHDQHNLP
ECCHHHHCEEEECCCCHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
HESYLEETYYHQINPDHGFMVQRVYTDDRSIDETMVVKNGDVVLVPKGYHPVSAPPGYEG
HHHHHHHHHHEECCCCCCEEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCC
YYLNVMAGPVRTWKFRNDPDHEWVMESKLAAKQK
EEEEEEECCEEEEECCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA