Click here to switch to the map view.

The map label for this gene is araB [H]

Identifier: 138895448

GI number: 138895448

Start: 1901581

End: 1903275

Strand: Reverse

Name: araB [H]

Synonym: GTNG_1796

Alternate gene names: 138895448

Gene position: 1903275-1901581 (Counterclockwise)

Preceding gene: 138895449

Following gene: 138895447

Centisome position: 53.61

GC content: 50.62

Gene sequence:

>1695_bases
ATGGGGAAAAAGTACGTCATCGGTATTGACTATGGGACGGAATCGGGGCGCGCAGTTCTCGTTGATCTAGAGGGAAACGA
AATTGCGGATCATGTCACTCCGTATCCTCACGGAGTCATTGATGAAGTATTGCCGGAATCGAACGTACAATTAGAACCAG
ACTGGGCACTACAGCACCCAGGTGATTATATCGAAGTGTTGGCGACTGCTGTTCCGGCTGTATTGCAAAAGTCAGGGGTC
AACCCGGCGGATGTGATTGGGGTTGGTATTGATTTTACCGCTTGCACGATGCTGCCGGTCGATGCTTCCGGTGAGCCGCT
TTGCCTGAAGCCCGAATTCAAGCATCGTCCACACAGCTGGGTGAAATTGTGGAAACATCATGCTGCCCAGGATGAAGCGA
ACTTGCTCAATGAAATCGCGGCGAAAAGAGGCGAAGCGTTTTTGCCGCGCTACGGTGGAAAGATTTCATCTGAATGGATG
ATTGCGAAAATTTGGCAGATTCTGAACGAGGCGCCTGATATTTACGATCAAACCGATCTTTTTTTAGAGGCAACCGACTG
GGTAATCTTCAAAATGACCGGTCAAATGGTGCGAAATAGCTGTACGGCTGGCTATAAATCGATTTGGCATAAACAAGACG
GCTATCCAAGTAAGGAGTTTTTCCGGGCGCTTGACCCGCGGTTGGAACATTTAACAGAAACGAAACTGCGTGGTCCGATC
GTTCCACTCGGCACAAGAGCCGGAGTGTTAACAAAGGAAATGGCTGCCATGATGGGTCTCCTTCCCGGAACCGCCGTTGC
GGTCGGAAATGTTGATGCCCATGCGGCTGTACCGGGTGTCGGGGTCGTTGAGCCAGGCAAATTGGTGATGGCGATGGGAA
CATCGATCTGCCATATGTTGCTTGGTACGGAAGAAAAGTATGTGGAAGGAATGTGCGGGGTTGTCGAGGATGGCATCATT
CCGGGATATTTCGGCTATGAAGCCGGGCAGTCAGCGGTGGGCGACATTTTCGCTTGGTATGTTGAACAAGGCGTTCCGGC
TTATGTGAAAGAAGCGGCGGAAAAAGAAGGGGTTAGTGTCCATGAGTGGCTGGAAAAGCGTGCTGCTGCTTACCGGCCGG
GGGAAACCGGATTGCTCGCTTTAGACTGGTGGAACGGGAACCGTTCGGTATTGGTCGACACCGATTTAACCGGGTTGATC
ATTGGCTATACGCTGCTAACGAAACCAGAAGAGGTTTACCGTGCATTGCTTGAAGCAACGGCCTTTGGAACACGCAAAAT
TATCGATGCCTTTGTTGAAAACGGTGTCAACGTGGATGAACTGTACGCATGCGGCGGATTGCCGCAAAAAAATAAGCTAC
TCATGCAAATTTATGCCGATGTGACCAACCGCGAGATTAAAATTGCGGCGTCGAAGCAAACCCCGGCAGTGGGGGCTGCC
ATGTTTGCGGCGGTCGCGGCCGGCAAAGAAAACGGTGGATATGAGTCGATCGTTGAAGCAGCACAAAACATGGGGAAAGT
GCGTGAAGAGACGTTCAAACCGATTCCGGAGAATGTCGCCATTTATGAACAGCTGTATCAAGAATATACGAAACTGCATG
ACTACTTTGGCCGCGGAGAAAACGATGTGATGAAACGGCTCAAACATTGGAAAGAGACCGCGCGGGCGGCAAAAGAATCT
ATGACTTTATCGTGA

Upstream 100 bases:

>100_bases
TCCAAATGCACAGCCGATCAGCCAGTCGCTGCTTGACCGTCATTATTTACGCAAGCATGGTGTAAACGCTTACTATGGAC
AATAAGGGAGGGAGACTGCG

Downstream 100 bases:

>100_bases
ATGGGGAGAGGCAATCATGTTATCATTACGTCCTTATGAATTTTGGTTTGTGACAGGAAGCCAGCACTTATACGGGGAAG
AAGCGTTAAAACAAGTTGAA

Product: ribulokinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MGKKYVIGIDYGTESGRAVLVDLEGNEIADHVTPYPHGVIDEVLPESNVQLEPDWALQHPGDYIEVLATAVPAVLQKSGV
NPADVIGVGIDFTACTMLPVDASGEPLCLKPEFKHRPHSWVKLWKHHAAQDEANLLNEIAAKRGEAFLPRYGGKISSEWM
IAKIWQILNEAPDIYDQTDLFLEATDWVIFKMTGQMVRNSCTAGYKSIWHKQDGYPSKEFFRALDPRLEHLTETKLRGPI
VPLGTRAGVLTKEMAAMMGLLPGTAVAVGNVDAHAAVPGVGVVEPGKLVMAMGTSICHMLLGTEEKYVEGMCGVVEDGII
PGYFGYEAGQSAVGDIFAWYVEQGVPAYVKEAAEKEGVSVHEWLEKRAAAYRPGETGLLALDWWNGNRSVLVDTDLTGLI
IGYTLLTKPEEVYRALLEATAFGTRKIIDAFVENGVNVDELYACGGLPQKNKLLMQIYADVTNREIKIAASKQTPAVGAA
MFAAVAAGKENGGYESIVEAAQNMGKVREETFKPIPENVAIYEQLYQEYTKLHDYFGRGENDVMKRLKHWKETARAAKES
MTLS

Sequences:

>Translated_564_residues
MGKKYVIGIDYGTESGRAVLVDLEGNEIADHVTPYPHGVIDEVLPESNVQLEPDWALQHPGDYIEVLATAVPAVLQKSGV
NPADVIGVGIDFTACTMLPVDASGEPLCLKPEFKHRPHSWVKLWKHHAAQDEANLLNEIAAKRGEAFLPRYGGKISSEWM
IAKIWQILNEAPDIYDQTDLFLEATDWVIFKMTGQMVRNSCTAGYKSIWHKQDGYPSKEFFRALDPRLEHLTETKLRGPI
VPLGTRAGVLTKEMAAMMGLLPGTAVAVGNVDAHAAVPGVGVVEPGKLVMAMGTSICHMLLGTEEKYVEGMCGVVEDGII
PGYFGYEAGQSAVGDIFAWYVEQGVPAYVKEAAEKEGVSVHEWLEKRAAAYRPGETGLLALDWWNGNRSVLVDTDLTGLI
IGYTLLTKPEEVYRALLEATAFGTRKIIDAFVENGVNVDELYACGGLPQKNKLLMQIYADVTNREIKIAASKQTPAVGAA
MFAAVAAGKENGGYESIVEAAQNMGKVREETFKPIPENVAIYEQLYQEYTKLHDYFGRGENDVMKRLKHWKETARAAKES
MTLS
>Mature_563_residues
GKKYVIGIDYGTESGRAVLVDLEGNEIADHVTPYPHGVIDEVLPESNVQLEPDWALQHPGDYIEVLATAVPAVLQKSGVN
PADVIGVGIDFTACTMLPVDASGEPLCLKPEFKHRPHSWVKLWKHHAAQDEANLLNEIAAKRGEAFLPRYGGKISSEWMI
AKIWQILNEAPDIYDQTDLFLEATDWVIFKMTGQMVRNSCTAGYKSIWHKQDGYPSKEFFRALDPRLEHLTETKLRGPIV
PLGTRAGVLTKEMAAMMGLLPGTAVAVGNVDAHAAVPGVGVVEPGKLVMAMGTSICHMLLGTEEKYVEGMCGVVEDGIIP
GYFGYEAGQSAVGDIFAWYVEQGVPAYVKEAAEKEGVSVHEWLEKRAAAYRPGETGLLALDWWNGNRSVLVDTDLTGLII
GYTLLTKPEEVYRALLEATAFGTRKIIDAFVENGVNVDELYACGGLPQKNKLLMQIYADVTNREIKIAASKQTPAVGAAM
FAAVAAGKENGGYESIVEAAQNMGKVREETFKPIPENVAIYEQLYQEYTKLHDYFGRGENDVMKRLKHWKETARAAKESM
TLS

Specific function: Unknown

COG id: COG1069

COG function: function code C; Ribulose kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulokinase family [H]

Homologues:

Organism=Homo sapiens, GI164663828, Length=561, Percent_Identity=29.4117647058824, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI164663830, Length=585, Percent_Identity=28.5470085470085, Blast_Score=165, Evalue=1e-40,
Organism=Escherichia coli, GI1786249, Length=548, Percent_Identity=35.5839416058394, Blast_Score=283, Evalue=2e-77,
Organism=Escherichia coli, GI1787789, Length=559, Percent_Identity=24.3291592128801, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1789138, Length=315, Percent_Identity=24.4444444444444, Blast_Score=68, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320314, Length=561, Percent_Identity=27.0944741532977, Blast_Score=149, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24657106, Length=556, Percent_Identity=28.2374100719424, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI24657102, Length=556, Percent_Identity=28.2374100719424, Blast_Score=159, Evalue=3e-39,
Organism=Drosophila melanogaster, GI21356323, Length=434, Percent_Identity=29.0322580645161, Blast_Score=131, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018484
- InterPro:   IPR005929 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.16 [H]

Molecular weight: Translated: 61905; Mature: 61774

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKKYVIGIDYGTESGRAVLVDLEGNEIADHVTPYPHGVIDEVLPESNVQLEPDWALQHP
CCCEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCEECCCCCCCCC
GDYIEVLATAVPAVLQKSGVNPADVIGVGIDFTACTMLPVDASGEPLCLKPEFKHRPHSW
CHHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEEEEECCCCCCEEECCCCCCCCHHH
VKLWKHHAAQDEANLLNEIAAKRGEAFLPRYGGKISSEWMIAKIWQILNEAPDIYDQTDL
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCE
FLEATDWVIFKMTGQMVRNSCTAGYKSIWHKQDGYPSKEFFRALDPRLEHLTETKLRGPI
EEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC
VPLGTRAGVLTKEMAAMMGLLPGTAVAVGNVDAHAAVPGVGVVEPGKLVMAMGTSICHML
CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
LGTEEKYVEGMCGVVEDGIIPGYFGYEAGQSAVGDIFAWYVEQGVPAYVKEAAEKEGVSV
HCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH
HEWLEKRAAAYRPGETGLLALDWWNGNRSVLVDTDLTGLIIGYTLLTKPEEVYRALLEAT
HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH
AFGTRKIIDAFVENGVNVDELYACGGLPQKNKLLMQIYADVTNREIKIAASKQTPAVGAA
HCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
MFAAVAAGKENGGYESIVEAAQNMGKVREETFKPIPENVAIYEQLYQEYTKLHDYFGRGE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
NDVMKRLKHWKETARAAKESMTLS
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
GKKYVIGIDYGTESGRAVLVDLEGNEIADHVTPYPHGVIDEVLPESNVQLEPDWALQHP
CCEEEEEEECCCCCCCEEEEEECCCHHHHCCCCCCCHHHHHHCCCCCCEECCCCCCCCC
GDYIEVLATAVPAVLQKSGVNPADVIGVGIDFTACTMLPVDASGEPLCLKPEFKHRPHSW
CHHHHHHHHHHHHHHHHCCCCHHHEEEECCCEEEEEEEEECCCCCCEEECCCCCCCCHHH
VKLWKHHAAQDEANLLNEIAAKRGEAFLPRYGGKISSEWMIAKIWQILNEAPDIYDQTDL
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCE
FLEATDWVIFKMTGQMVRNSCTAGYKSIWHKQDGYPSKEFFRALDPRLEHLTETKLRGPI
EEEECCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHCCCC
VPLGTRAGVLTKEMAAMMGLLPGTAVAVGNVDAHAAVPGVGVVEPGKLVMAMGTSICHML
CCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHH
LGTEEKYVEGMCGVVEDGIIPGYFGYEAGQSAVGDIFAWYVEQGVPAYVKEAAEKEGVSV
HCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCH
HEWLEKRAAAYRPGETGLLALDWWNGNRSVLVDTDLTGLIIGYTLLTKPEEVYRALLEAT
HHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHH
AFGTRKIIDAFVENGVNVDELYACGGLPQKNKLLMQIYADVTNREIKIAASKQTPAVGAA
HCCHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCHHHHH
MFAAVAAGKENGGYESIVEAAQNMGKVREETFKPIPENVAIYEQLYQEYTKLHDYFGRGE
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
NDVMKRLKHWKETARAAKESMTLS
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA