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The map label for this gene is araA [H]

Identifier: 138895447

GI number: 138895447

Start: 1900074

End: 1901564

Strand: Reverse

Name: araA [H]

Synonym: GTNG_1795

Alternate gene names: 138895447

Gene position: 1901564-1900074 (Counterclockwise)

Preceding gene: 138895448

Following gene: 138895446

Centisome position: 53.56

GC content: 50.57

Gene sequence:

>1491_bases
ATGTTATCATTACGTCCTTATGAATTTTGGTTTGTGACAGGAAGCCAGCACTTATACGGGGAAGAAGCGTTAAAACAAGT
TGAAGAACATTCAAGAACGATCGTCAATGAGTTGAACCGTGATTCGGTGTTTCCGTTCCCACTCGTTTTCAAACCGATCG
TCACAACCCCAGAAGAAATTCGCAACATCTGTCTTGAGGCGAATGCGAGCGAACAATGTGCCGGCGTTGTCACATGGATG
CATACGTTCTCGCCAGCGAAGATGTGGATTGGCGGCCTTTTGGAGTTGCGAAAACCGTTATTGCATCTTCACACTCAGTT
TAACCGTGATATTCCGTGGGACAGCATCGATATGGACTTTATGAACTTAAACCAATCGGCTCACGGTGACCGAGAATACG
GATTTATCGGTGCGAGAATGGGAGTTGCCCGGAAAGTCGTCGTTGGTCATTGGGAAGACCCAGAAGTCCGCGAGCGGCTG
GCGAAATGGATGCGGACGGCCGTCGCCTTTGCGGAAAGCCGACATCTTAAAGTTGCCCGTTTCGGCGATAACATGCGTGA
AGTGGCGGTAACGGAAGGGGACAAAGTGGGAGCGCAAATTCAATTCGGCTGGTCGATCAACGGTTATGGCATTGGGGATT
TGGTGCAATCTATTCGCGATGTTTCTGAACAAAGCGTCAACGAACTGCTTGATGAATATGCCGAACTATATGACATTGTA
CCTGCTGGCCGTCAAGATGGACCGGTTCGCGAGTCGATCCGCGAGCAGGCGCGGATTGAGCTTGGGTTAAAAGCCTTTTT
ACAAGACGGGAACTTCACTGCCTTTACGACGACGTTTGAAGATTTGCACGGCATGAAGCAACTTCCAGGACTAGCGGTTC
AACGGCTTATGGCAGAGGGATATGGATTTGGCGGCGAAGGCGACTGGAAAACGGCTGCTCTCGTTCGGTTGATGAAAGTC
ATGGCGGATGGCAAAGGAACATCGTTCATGGAAGACTACACGTACCACTTTGAGCCGGGCAACGAAATGATTCTTGGCGC
TCATATGCTCGAAGTATGCCCGACGATCGCAGCAACGCGACCGCGCATCGAAGTTCATCCGCTTTCGATTGGTGGAAAAG
AAGATCCAGCCCGTCTCGTGTTTGACGGCGGTGAGGGCGCAGCGGTCAATGCTTCGCTGATTGACTTAGGGCACCGTTTC
CGTCTCATTGTCAATGAAGTCGATGCGGTGAAACCGGAATTCGACATGCTGAAATTGCCGGTTGCCCGTATTTTATGGAA
ACCGCGCCCGTCGTTGCGTGATTCAGCTGAAGCATGGATTTTAGCCGGCGGTGCTCATCACACATGCTTCTCGTTTGCCG
TCACGGCTGAACAGCTGGAAGACTTTGCGGAAATGACCGGCATTGAATGTGTCGTGATCAATGAACATACTTCCGTCTCG
TCATTCAAAAACGAACTGAGGTGGAATGAGGTATTTTGGCGAGGGAGGTAA

Upstream 100 bases:

>100_bases
CGCGGAGAAAACGATGTGATGAAACGGCTCAAACATTGGAAAGAGACCGCGCGGGCGGCAAAAGAATCTATGACTTTATC
GTGAATGGGGAGAGGCAATC

Downstream 100 bases:

>100_bases
GGTTAAATAGCACGTAATTCATATAGCACGAAATCAAGGACACGGGTTGGAAGAAGAGCCCGTGTCTTTGTTTTTTACCA
ACTAATGTTATGTAAAAAGT

Product: L-arabinose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MLSLRPYEFWFVTGSQHLYGEEALKQVEEHSRTIVNELNRDSVFPFPLVFKPIVTTPEEIRNICLEANASEQCAGVVTWM
HTFSPAKMWIGGLLELRKPLLHLHTQFNRDIPWDSIDMDFMNLNQSAHGDREYGFIGARMGVARKVVVGHWEDPEVRERL
AKWMRTAVAFAESRHLKVARFGDNMREVAVTEGDKVGAQIQFGWSINGYGIGDLVQSIRDVSEQSVNELLDEYAELYDIV
PAGRQDGPVRESIREQARIELGLKAFLQDGNFTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRLMKV
MADGKGTSFMEDYTYHFEPGNEMILGAHMLEVCPTIAATRPRIEVHPLSIGGKEDPARLVFDGGEGAAVNASLIDLGHRF
RLIVNEVDAVKPEFDMLKLPVARILWKPRPSLRDSAEAWILAGGAHHTCFSFAVTAEQLEDFAEMTGIECVVINEHTSVS
SFKNELRWNEVFWRGR

Sequences:

>Translated_496_residues
MLSLRPYEFWFVTGSQHLYGEEALKQVEEHSRTIVNELNRDSVFPFPLVFKPIVTTPEEIRNICLEANASEQCAGVVTWM
HTFSPAKMWIGGLLELRKPLLHLHTQFNRDIPWDSIDMDFMNLNQSAHGDREYGFIGARMGVARKVVVGHWEDPEVRERL
AKWMRTAVAFAESRHLKVARFGDNMREVAVTEGDKVGAQIQFGWSINGYGIGDLVQSIRDVSEQSVNELLDEYAELYDIV
PAGRQDGPVRESIREQARIELGLKAFLQDGNFTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRLMKV
MADGKGTSFMEDYTYHFEPGNEMILGAHMLEVCPTIAATRPRIEVHPLSIGGKEDPARLVFDGGEGAAVNASLIDLGHRF
RLIVNEVDAVKPEFDMLKLPVARILWKPRPSLRDSAEAWILAGGAHHTCFSFAVTAEQLEDFAEMTGIECVVINEHTSVS
SFKNELRWNEVFWRGR
>Mature_496_residues
MLSLRPYEFWFVTGSQHLYGEEALKQVEEHSRTIVNELNRDSVFPFPLVFKPIVTTPEEIRNICLEANASEQCAGVVTWM
HTFSPAKMWIGGLLELRKPLLHLHTQFNRDIPWDSIDMDFMNLNQSAHGDREYGFIGARMGVARKVVVGHWEDPEVRERL
AKWMRTAVAFAESRHLKVARFGDNMREVAVTEGDKVGAQIQFGWSINGYGIGDLVQSIRDVSEQSVNELLDEYAELYDIV
PAGRQDGPVRESIREQARIELGLKAFLQDGNFTAFTTTFEDLHGMKQLPGLAVQRLMAEGYGFGGEGDWKTAALVRLMKV
MADGKGTSFMEDYTYHFEPGNEMILGAHMLEVCPTIAATRPRIEVHPLSIGGKEDPARLVFDGGEGAAVNASLIDLGHRF
RLIVNEVDAVKPEFDMLKLPVARILWKPRPSLRDSAEAWILAGGAHHTCFSFAVTAEQLEDFAEMTGIECVVINEHTSVS
SFKNELRWNEVFWRGR

Specific function: Catalyzes the conversion of L-arabinose to L-ribulose [H]

COG id: COG2160

COG function: function code G; L-arabinose isomerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the arabinose isomerase family [H]

Homologues:

Organism=Escherichia coli, GI1786248, Length=493, Percent_Identity=61.0547667342799, Blast_Score=637, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004216
- InterPro:   IPR009015
- InterPro:   IPR003762
- ProDom:   PD018364 [H]

Pfam domain/function: PF02610 Arabinose_Isome [H]

EC number: =5.3.1.4 [H]

Molecular weight: Translated: 55899; Mature: 55899

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLRPYEFWFVTGSQHLYGEEALKQVEEHSRTIVNELNRDSVFPFPLVFKPIVTTPEEI
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
RNICLEANASEQCAGVVTWMHTFSPAKMWIGGLLELRKPLLHLHTQFNRDIPWDSIDMDF
HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MNLNQSAHGDREYGFIGARMGVARKVVVGHWEDPEVRERLAKWMRTAVAFAESRHLKVAR
HHCCCCCCCCCCCCEEEHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
FGDNMREVAVTEGDKVGAQIQFGWSINGYGIGDLVQSIRDVSEQSVNELLDEYAELYDIV
CCCCCCEEEECCCCCCCCEEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAGRQDGPVRESIREQARIELGLKAFLQDGNFTAFTTTFEDLHGMKQLPGLAVQRLMAEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHC
YGFGGEGDWKTAALVRLMKVMADGKGTSFMEDYTYHFEPGNEMILGAHMLEVCPTIAATR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCEEEECCCCCEEEHHHHHHHHHHHHCCC
PRIEVHPLSIGGKEDPARLVFDGGEGAAVNASLIDLGHRFRLIVNEVDAVKPEFDMLKLP
CCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHCHHHHHHHHHHHHCCCCHHHHHHH
VARILWKPRPSLRDSAEAWILAGGAHHTCFSFAVTAEQLEDFAEMTGIECVVINEHTSVS
HHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
SFKNELRWNEVFWRGR
HHHHHCCHHHHEECCC
>Mature Secondary Structure
MLSLRPYEFWFVTGSQHLYGEEALKQVEEHSRTIVNELNRDSVFPFPLVFKPIVTTPEEI
CCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHH
RNICLEANASEQCAGVVTWMHTFSPAKMWIGGLLELRKPLLHLHTQFNRDIPWDSIDMDF
HHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
MNLNQSAHGDREYGFIGARMGVARKVVVGHWEDPEVRERLAKWMRTAVAFAESRHLKVAR
HHCCCCCCCCCCCCEEEHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
FGDNMREVAVTEGDKVGAQIQFGWSINGYGIGDLVQSIRDVSEQSVNELLDEYAELYDIV
CCCCCCEEEECCCCCCCCEEEEECEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PAGRQDGPVRESIREQARIELGLKAFLQDGNFTAFTTTFEDLHGMKQLPGLAVQRLMAEG
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCHHHHHHHHHHC
YGFGGEGDWKTAALVRLMKVMADGKGTSFMEDYTYHFEPGNEMILGAHMLEVCPTIAATR
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHCCEEEECCCCCEEEHHHHHHHHHHHHCCC
PRIEVHPLSIGGKEDPARLVFDGGEGAAVNASLIDLGHRFRLIVNEVDAVKPEFDMLKLP
CCEEEEEECCCCCCCCCEEEEECCCCCEEEHHHHHHCHHHHHHHHHHHHCCCCHHHHHHH
VARILWKPRPSLRDSAEAWILAGGAHHTCFSFAVTAEQLEDFAEMTGIECVVINEHTSVS
HHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHH
SFKNELRWNEVFWRGR
HHHHHCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA