Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yesM [H]
Identifier: 138895438
GI number: 138895438
Start: 1887411
End: 1889141
Strand: Reverse
Name: yesM [H]
Synonym: GTNG_1782
Alternate gene names: 138895438
Gene position: 1889141-1887411 (Counterclockwise)
Preceding gene: 138895439
Following gene: 138895437
Centisome position: 53.21
GC content: 36.97
Gene sequence:
>1731_bases ATGGTAGATCGTATAAAAAAATGGAACACGCTGCGGAATCAAATATTAGTTATATTCTTATTTGTTATGATCATCGTACT GTCTATAGTCAGTATCATTACCCTCAGACAAGTATCTTTACTTATCAAGAATAATGCGGAAGATCAAATCAGGCAGACAG CTGTCGAGGCGAGCGGGAGGATTGATTCACTGTTTGAACAGTTAAATACGGCAACAAAATCTATTATGACGAATCACGAA GTTCAAAAACTATTTGAACGAATGTATTTAGGGAAGAGCGTAACGTTTGCGGAGTTACAGGGACTAAAAAGCATTGTAAA TAATATTCAGGCGAACTCTGAAGGAGTTTATTCAGTTGAATTATATACTACAGATTTAAAGCAGATTTTTCCGCTGAACG ACTCAACTAAAATGTTTCAGCGTATCAATGTAAAATGGATCCATGAAGCCGAACAAGCGAAAGGTAAGTTGGTTTGGATA GGAGAAGATCCGAAAAATGACGATTTTTATTTGGCGATTAGACGAATATCCTTGATCGAGCATAATTTTGAGAATGGCGG CTATTTATTGGTCCGGATTAATAAACCATATTTTTCAATTACCGAAGTAAATACGCAACAATATTTATTTGTATTGGATC ATGAGTGGAATCCGATTTTTTCTAACTTTTCAAAATCAATCGATGTTCTTTCTTTGAAACATCAGTCAACTACAAAGATT AATCAGATTGAATATATGGTGACGAAGCAATCCTCTACTAAAGGATTTACCGTTGTTATATTAACTCCTGTTAGTGCTCT TACAAAGGGAATGAATGGCATCCGTCTGGGAATTATTTTTGCCGGTATCATTGGGATAGTGATTTACTTCTTATGTTCTT TATTTCTTTCCAATATGATTACAAAGCCGATTGTCAACTTGACAAAAACGATGCGACTTGCTAATGAGGGATTATTAACT ATTGATCCGGAAACGATCACTGTTAATGAAATAAGAGAACTGAATAGCACATACAACCAATTGGTGAGGGAAACGAACCA TCTGATTAAAACGGTATACCAAAAAGAAATTATTCGTAGCCAAAGTGAGTTAAAAGCGTTGCAGGCACAGATTAATCCTC ATTTTCTATATAATACTTTGGAATCGTTGCGTTGGTCCTTAGAAGAAAAGGGGGAAGAAGACTTAGCTGATGTGGTCGTT TCGATGTCGGATTTATTTCGTTATACTATCAGTAGAAATTCAAACGACGATTGGGTCACGTTGAAAGAAGAGTTTGATCA TATTGGGAATTACATAGAAATTATAAAATTTCGGTTTGGTGACCGCATAAAGTGGTGTTTGCTGTTACCGGAGGCGCTAG AGCATGTAAAAATCCCTAAGCTTTTAATTCAACCATTGGTTGAGAACGCGGTCGTACATGGTTCGGAAAATCAATTAGCT TCTTGTACCATTACGGTAGCGGCCGAGCTAGCTTCAGATAGTTATATACAGATCGTTGTGGAGGATGACGGGGTCGGGAT GGACGAGGAAAGACTGCAGGCTGTCAAACAGGCAATGGATACTGGTGATATTATTTCAAAAAGTGGGAAGGGAATGGCTT TGCATAATGTCAAAAAACGCTTGCAGCTTTACTATAATGAGGAAATAAGTGATAGTATAACAATTTGCAGCCATAAAAAC AAAGGAACGAAGATAACGCTGAAAATTCCTGTTAACGGAGGTGAAACGTAA
Upstream 100 bases:
>100_bases GGATGGTACAGGTGCGGTTGAGAAATTAACATTTCAACGTACGTTGTGTTAATCATAACTTGTAGGACGGCAATTTTACT ATAGAAAGGTACGTAACGTT
Downstream 100 bases:
>100_bases TGTACGATAAGACGATCTTAGTCGTAGATGATGAACCAAGAGCGAGAGAGGGGATTAAAAGGGCGTTGGAAAAGTGGGCC TCTGGCAAACATAGAATTAT
Product: two-component sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 576; Mature: 576
Protein sequence:
>576_residues MVDRIKKWNTLRNQILVIFLFVMIIVLSIVSIITLRQVSLLIKNNAEDQIRQTAVEASGRIDSLFEQLNTATKSIMTNHE VQKLFERMYLGKSVTFAELQGLKSIVNNIQANSEGVYSVELYTTDLKQIFPLNDSTKMFQRINVKWIHEAEQAKGKLVWI GEDPKNDDFYLAIRRISLIEHNFENGGYLLVRINKPYFSITEVNTQQYLFVLDHEWNPIFSNFSKSIDVLSLKHQSTTKI NQIEYMVTKQSSTKGFTVVILTPVSALTKGMNGIRLGIIFAGIIGIVIYFLCSLFLSNMITKPIVNLTKTMRLANEGLLT IDPETITVNEIRELNSTYNQLVRETNHLIKTVYQKEIIRSQSELKALQAQINPHFLYNTLESLRWSLEEKGEEDLADVVV SMSDLFRYTISRNSNDDWVTLKEEFDHIGNYIEIIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLA SCTITVAAELASDSYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKRLQLYYNEEISDSITICSHKN KGTKITLKIPVNGGET
Sequences:
>Translated_576_residues MVDRIKKWNTLRNQILVIFLFVMIIVLSIVSIITLRQVSLLIKNNAEDQIRQTAVEASGRIDSLFEQLNTATKSIMTNHE VQKLFERMYLGKSVTFAELQGLKSIVNNIQANSEGVYSVELYTTDLKQIFPLNDSTKMFQRINVKWIHEAEQAKGKLVWI GEDPKNDDFYLAIRRISLIEHNFENGGYLLVRINKPYFSITEVNTQQYLFVLDHEWNPIFSNFSKSIDVLSLKHQSTTKI NQIEYMVTKQSSTKGFTVVILTPVSALTKGMNGIRLGIIFAGIIGIVIYFLCSLFLSNMITKPIVNLTKTMRLANEGLLT IDPETITVNEIRELNSTYNQLVRETNHLIKTVYQKEIIRSQSELKALQAQINPHFLYNTLESLRWSLEEKGEEDLADVVV SMSDLFRYTISRNSNDDWVTLKEEFDHIGNYIEIIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLA SCTITVAAELASDSYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKRLQLYYNEEISDSITICSHKN KGTKITLKIPVNGGET >Mature_576_residues MVDRIKKWNTLRNQILVIFLFVMIIVLSIVSIITLRQVSLLIKNNAEDQIRQTAVEASGRIDSLFEQLNTATKSIMTNHE VQKLFERMYLGKSVTFAELQGLKSIVNNIQANSEGVYSVELYTTDLKQIFPLNDSTKMFQRINVKWIHEAEQAKGKLVWI GEDPKNDDFYLAIRRISLIEHNFENGGYLLVRINKPYFSITEVNTQQYLFVLDHEWNPIFSNFSKSIDVLSLKHQSTTKI NQIEYMVTKQSSTKGFTVVILTPVSALTKGMNGIRLGIIFAGIIGIVIYFLCSLFLSNMITKPIVNLTKTMRLANEGLLT IDPETITVNEIRELNSTYNQLVRETNHLIKTVYQKEIIRSQSELKALQAQINPHFLYNTLESLRWSLEEKGEEDLADVVV SMSDLFRYTISRNSNDDWVTLKEEFDHIGNYIEIIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLA SCTITVAAELASDSYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKRLQLYYNEEISDSITICSHKN KGTKITLKIPVNGGET
Specific function: Member of the two-component regulatory system yesM/yesN. Probably activates yesN by phosphorylation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1788446, Length=217, Percent_Identity=29.9539170506912, Blast_Score=105, Evalue=6e-24, Organism=Escherichia coli, GI1788723, Length=211, Percent_Identity=31.2796208530806, Blast_Score=98, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR010559 - InterPro: IPR005467 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF06580 His_kinase [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 65663; Mature: 65663
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDRIKKWNTLRNQILVIFLFVMIIVLSIVSIITLRQVSLLIKNNAEDQIRQTAVEASGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC IDSLFEQLNTATKSIMTNHEVQKLFERMYLGKSVTFAELQGLKSIVNNIQANSEGVYSVE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE LYTTDLKQIFPLNDSTKMFQRINVKWIHEAEQAKGKLVWIGEDPKNDDFYLAIRRISLIE EEEECHHHHCCCCCHHHHHHHCCHHEEECHHHCCCCEEEEECCCCCCCCEEEHHHHHHHH HNFENGGYLLVRINKPYFSITEVNTQQYLFVLDHEWNPIFSNFSKSIDVLSLKHQSTTKI CCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCH NQIEYMVTKQSSTKGFTVVILTPVSALTKGMNGIRLGIIFAGIIGIVIYFLCSLFLSNMI HHEEEEEEECCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TKPIVNLTKTMRLANEGLLTIDPETITVNEIRELNSTYNQLVRETNHLIKTVYQKEIIRS HHHHHHHHHHHHHHCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSELKALQAQINPHFLYNTLESLRWSLEEKGEEDLADVVVSMSDLFRYTISRNSNDDWVT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LKEEFDHIGNYIEIIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLA EHHHHHHHCHHHHHHHHHCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHEEECCCCCEE SCTITVAAELASDSYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKR EEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH LQLYYNEEISDSITICSHKNKGTKITLKIPVNGGET HHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC >Mature Secondary Structure MVDRIKKWNTLRNQILVIFLFVMIIVLSIVSIITLRQVSLLIKNNAEDQIRQTAVEASGR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC IDSLFEQLNTATKSIMTNHEVQKLFERMYLGKSVTFAELQGLKSIVNNIQANSEGVYSVE HHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE LYTTDLKQIFPLNDSTKMFQRINVKWIHEAEQAKGKLVWIGEDPKNDDFYLAIRRISLIE EEEECHHHHCCCCCHHHHHHHCCHHEEECHHHCCCCEEEEECCCCCCCCEEEHHHHHHHH HNFENGGYLLVRINKPYFSITEVNTQQYLFVLDHEWNPIFSNFSKSIDVLSLKHQSTTKI CCCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHHCCCEEEEECCCCCCCH NQIEYMVTKQSSTKGFTVVILTPVSALTKGMNGIRLGIIFAGIIGIVIYFLCSLFLSNMI HHEEEEEEECCCCCCEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TKPIVNLTKTMRLANEGLLTIDPETITVNEIRELNSTYNQLVRETNHLIKTVYQKEIIRS HHHHHHHHHHHHHHCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSELKALQAQINPHFLYNTLESLRWSLEEKGEEDLADVVVSMSDLFRYTISRNSNDDWVT HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEE LKEEFDHIGNYIEIIKFRFGDRIKWCLLLPEALEHVKIPKLLIQPLVENAVVHGSENQLA EHHHHHHHCHHHHHHHHHCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHEEECCCCCEE SCTITVAAELASDSYIQIVVEDDGVGMDEERLQAVKQAMDTGDIISKSGKGMALHNVKKR EEEEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHH LQLYYNEEISDSITICSHKNKGTKITLKIPVNGGET HHHHCCCCCCCCEEEEECCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]