Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yurO [H]
Identifier: 138895436
GI number: 138895436
Start: 1885183
End: 1886505
Strand: Reverse
Name: yurO [H]
Synonym: GTNG_1780
Alternate gene names: 138895436
Gene position: 1886505-1885183 (Counterclockwise)
Preceding gene: 138895437
Following gene: 138895435
Centisome position: 53.14
GC content: 41.57
Gene sequence:
>1323_bases GTGAAAAAGAAAGCGTTAACATTGTTGGTTTTATTTACGCTTATGATCGGTTTTGCATTGTCTGGCTGCTCTTCGTCGAG TGAATCGGCAAGCGGGGACAAATCGGGAGACGGGAAAATCCATCTCAAGTTTATGCATGATTGGCCGAAAGGAAGTTCGA CAGCTTACTATAATCTCGTCGAAGAAATTATTAAAGACTATGAAGCGAAAAATCCAAATGTTGTGATCGATGTGGAAGTG TTAAATCCTGATCAATATCGGGATAAATTAAAAGTGTTGGCTGCTTCGAATGAATTGCCTGATGTGGGGTTGACGTGGTC CAACGGTTTTGCTGAACCGTATGCAACGGGAGGACAGTTTGCCCCGTTAGATGATATTATAGAAAAAGAATTTAAAGACC AGTTTGTACCTGGTACAGCAGAATCGTATTCGTTTAATGGAAAATTTTATGCGCTGCCAATGGAAATGAACATTACTTAT ATTTTCTACAATAAAGAGATTTTCAAAAAATATGGTCTCCAAGAACCGAAAAACTTTGAAGATTTGAAAAATATCGGAAA AACGTTAGCTAAAAATGGTATCATCCCAGCAACGGTTGGTTCGAAGGACGGATGGCCGGCATCAATGTGGTTTATGTACC TCGCTGACCGGATTGGTGGCCCGACGATTTTGACGGACGTCATTCATGGGAAAGTAAAAATGTCTGATCCAGCCATTGTA AAAGCGGCGAAAGAAATTCAAAATCTTGTCGATATGGGATTCTTCGTGAAAGGAAATACTGCCTTCTCGAATGACGATGC CAAGGGTTATTTCCTAAACGAAAAAGCGGCAATGTTCTTAACGGCTACATGGGAATTGCCGAACTTTACGACAAGCCCAG ATGTTCCAAAAGAATTTAAAGAAAAAGTCGGTTATTTTAAATTCCCGCTGTACGAAGGCGGAAAAGGAACAGATGTGAAC AGCTATGTCGGCGGCCCAGGGTTAGGAGCGTTTGTTGCAGAAAATTCGAAACATAAAGAACAAGCCAAAGATTTCGCTGC GTTTCTTGTAAAAGAATGGGGCAAACGTTCGGTTGAAGGGGCAGGCATTCTTCCGGCTACGAAAGTCAATACGGAAGGAT TAGACGTGCCAGAAATGTATCTTGATGTCTTAAATGATATTAACAACGCAACAAATATCACGACTTGGTTTGACACTCAA GCAAGCCCGAATGTGTCCGAATTGCACCACGATTTGATGACGGCTCTGTTTGGTAAACAAGTAACACCGGAGGAATTTGC AAAGCAACATGATGAAGCGCTCGCTGAGGAAGCAAAGAAATAA
Upstream 100 bases:
>100_bases TCCCTAATCGTTGTTACCTTTTTTGCCTCCTGTTGCAATGGTACACTGTATTCGTAAGCAAGTTTATTAATTTTAAATAA CAAAAAGGGGGGCAAAATTA
Downstream 100 bases:
>100_bases AGTGAACAAGAATTTTGGGGGCATGGGTGGCAACATATGCCCCCTCATTTGTAAACCGAGAAGGGGTTATTGGCGATGAA AAATGTTATGTCCAATAAAA
Product: sugar ABC transporter sugar-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKKKALTLLVLFTLMIGFALSGCSSSSESASGDKSGDGKIHLKFMHDWPKGSSTAYYNLVEEIIKDYEAKNPNVVIDVEV LNPDQYRDKLKVLAASNELPDVGLTWSNGFAEPYATGGQFAPLDDIIEKEFKDQFVPGTAESYSFNGKFYALPMEMNITY IFYNKEIFKKYGLQEPKNFEDLKNIGKTLAKNGIIPATVGSKDGWPASMWFMYLADRIGGPTILTDVIHGKVKMSDPAIV KAAKEIQNLVDMGFFVKGNTAFSNDDAKGYFLNEKAAMFLTATWELPNFTTSPDVPKEFKEKVGYFKFPLYEGGKGTDVN SYVGGPGLGAFVAENSKHKEQAKDFAAFLVKEWGKRSVEGAGILPATKVNTEGLDVPEMYLDVLNDINNATNITTWFDTQ ASPNVSELHHDLMTALFGKQVTPEEFAKQHDEALAEEAKK
Sequences:
>Translated_440_residues MKKKALTLLVLFTLMIGFALSGCSSSSESASGDKSGDGKIHLKFMHDWPKGSSTAYYNLVEEIIKDYEAKNPNVVIDVEV LNPDQYRDKLKVLAASNELPDVGLTWSNGFAEPYATGGQFAPLDDIIEKEFKDQFVPGTAESYSFNGKFYALPMEMNITY IFYNKEIFKKYGLQEPKNFEDLKNIGKTLAKNGIIPATVGSKDGWPASMWFMYLADRIGGPTILTDVIHGKVKMSDPAIV KAAKEIQNLVDMGFFVKGNTAFSNDDAKGYFLNEKAAMFLTATWELPNFTTSPDVPKEFKEKVGYFKFPLYEGGKGTDVN SYVGGPGLGAFVAENSKHKEQAKDFAAFLVKEWGKRSVEGAGILPATKVNTEGLDVPEMYLDVLNDINNATNITTWFDTQ ASPNVSELHHDLMTALFGKQVTPEEFAKQHDEALAEEAKK >Mature_440_residues MKKKALTLLVLFTLMIGFALSGCSSSSESASGDKSGDGKIHLKFMHDWPKGSSTAYYNLVEEIIKDYEAKNPNVVIDVEV LNPDQYRDKLKVLAASNELPDVGLTWSNGFAEPYATGGQFAPLDDIIEKEFKDQFVPGTAESYSFNGKFYALPMEMNITY IFYNKEIFKKYGLQEPKNFEDLKNIGKTLAKNGIIPATVGSKDGWPASMWFMYLADRIGGPTILTDVIHGKVKMSDPAIV KAAKEIQNLVDMGFFVKGNTAFSNDDAKGYFLNEKAAMFLTATWELPNFTTSPDVPKEFKEKVGYFKFPLYEGGKGTDVN SYVGGPGLGAFVAENSKHKEQAKDFAAFLVKEWGKRSVEGAGILPATKVNTEGLDVPEMYLDVLNDINNATNITTWFDTQ ASPNVSELHHDLMTALFGKQVTPEEFAKQHDEALAEEAKK
Specific function: Probably part of the binding-protein-dependent transport system yurMNO [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 48682; Mature: 48682
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKALTLLVLFTLMIGFALSGCSSSSESASGDKSGDGKIHLKFMHDWPKGSSTAYYNLV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHH EEIIKDYEAKNPNVVIDVEVLNPDQYRDKLKVLAASNELPDVGLTWSNGFAEPYATGGQF HHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC APLDDIIEKEFKDQFVPGTAESYSFNGKFYALPMEMNITYIFYNKEIFKKYGLQEPKNFE CCHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEEEEEEEEECHHHHHHCCCCCCCCHH DLKNIGKTLAKNGIIPATVGSKDGWPASMWFMYLADRIGGPTILTDVIHGKVKMSDPAIV HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCHHHH KAAKEIQNLVDMGFFVKGNTAFSNDDAKGYFLNEKAAMFLTATWELPNFTTSPDVPKEFK HHHHHHHHHHHCCEEEECCCEECCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHH EKVGYFKFPLYEGGKGTDVNSYVGGPGLGAFVAENSKHKEQAKDFAAFLVKEWGKRSVEG HHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC AGILPATKVNTEGLDVPEMYLDVLNDINNATNITTWFDTQASPNVSELHHDLMTALFGKQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC VTPEEFAKQHDEALAEEAKK CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKALTLLVLFTLMIGFALSGCSSSSESASGDKSGDGKIHLKFMHDWPKGSSTAYYNLV CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHH EEIIKDYEAKNPNVVIDVEVLNPDQYRDKLKVLAASNELPDVGLTWSNGFAEPYATGGQF HHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCC APLDDIIEKEFKDQFVPGTAESYSFNGKFYALPMEMNITYIFYNKEIFKKYGLQEPKNFE CCHHHHHHHHHHHHCCCCCCCCEEECCEEEEEEEEEEEEEEEECHHHHHHCCCCCCCCHH DLKNIGKTLAKNGIIPATVGSKDGWPASMWFMYLADRIGGPTILTDVIHGKVKMSDPAIV HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCEEECCCHHHH KAAKEIQNLVDMGFFVKGNTAFSNDDAKGYFLNEKAAMFLTATWELPNFTTSPDVPKEFK HHHHHHHHHHHCCEEEECCCEECCCCCCEEEECCCEEEEEEEEEECCCCCCCCCCCHHHH EKVGYFKFPLYEGGKGTDVNSYVGGPGLGAFVAENSKHKEQAKDFAAFLVKEWGKRSVEG HHCCCEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCC AGILPATKVNTEGLDVPEMYLDVLNDINNATNITTWFDTQASPNVSELHHDLMTALFGKQ CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCC VTPEEFAKQHDEALAEEAKK CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]