Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is ykoP [H]
Identifier: 138895400
GI number: 138895400
Start: 1844726
End: 1845277
Strand: Reverse
Name: ykoP [H]
Synonym: GTNG_1744
Alternate gene names: 138895400
Gene position: 1845277-1844726 (Counterclockwise)
Preceding gene: 138895402
Following gene: 138895399
Centisome position: 51.97
GC content: 47.46
Gene sequence:
>552_bases TTGTTGGCGATGTGGGGAATCATCGATCCGATTTATTACGCCTGTTCTCGACTCGAATACGCTGGTGAAGCGCAGGATGG ACGCCGTTCCATTTTCCGCGTCCGCCCGCTCCAATACAAAGGGGAGACGATCCATCTTTCGGACGGAACGACGATTGCGG CGAATGATTGGCTGTTGAAAATTCATCTCCACAACGTCCGGCTCGTGCGTGAACTGTTTCGATATGACAGTGACATTAAA AAAGGGCGCTATATTCTTGAACAAGTCAAATCCGGCTTGCCGTATGTCGCCTACCATCTTTATCACCATAAACATTCTGA ACGGATGAAAGGGATTATTGGTATTACAATGTTAAACAAAGGATGCGAACGGCTCGGATTTGAAACGGTGGATATTGCCA ATCCGTTGTATCGTTGGTTCAAAACAATGGCGCTCGTGCCGATGATGGCGGTGGCTCGACCTGGGTTGTCGCCATTTGGC CGTCCGCCAAAATATTTGTTGATGTCGAAAGAAAAGCTGTTTTCCTTATACGGTTACCATCTTATCCACTAA
Upstream 100 bases:
>100_bases TTCCCCATTTATAATGTGTCGGCAAATGTTCCAAAATGTTAATACATAAGATATGAGATAAAGGAAGGATGCAGGCATGA AGGAAAAAGCGGTTGAATGT
Downstream 100 bases:
>100_bases CTCCCTCTTTCTTCTCTCCTCCGTTTCACTATAATGGTTATCGAGGGAGGAGAGAAGACAATGGCGTTCTTGTTGATCAT TCTATCATTCTTTTTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MLAMWGIIDPIYYACSRLEYAGEAQDGRRSIFRVRPLQYKGETIHLSDGTTIAANDWLLKIHLHNVRLVRELFRYDSDIK KGRYILEQVKSGLPYVAYHLYHHKHSERMKGIIGITMLNKGCERLGFETVDIANPLYRWFKTMALVPMMAVARPGLSPFG RPPKYLLMSKEKLFSLYGYHLIH
Sequences:
>Translated_183_residues MLAMWGIIDPIYYACSRLEYAGEAQDGRRSIFRVRPLQYKGETIHLSDGTTIAANDWLLKIHLHNVRLVRELFRYDSDIK KGRYILEQVKSGLPYVAYHLYHHKHSERMKGIIGITMLNKGCERLGFETVDIANPLYRWFKTMALVPMMAVARPGLSPFG RPPKYLLMSKEKLFSLYGYHLIH >Mature_183_residues MLAMWGIIDPIYYACSRLEYAGEAQDGRRSIFRVRPLQYKGETIHLSDGTTIAANDWLLKIHLHNVRLVRELFRYDSDIK KGRYILEQVKSGLPYVAYHLYHHKHSERMKGIIGITMLNKGCERLGFETVDIANPLYRWFKTMALVPMMAVARPGLSPFG RPPKYLLMSKEKLFSLYGYHLIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21316; Mature: 21316
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAMWGIIDPIYYACSRLEYAGEAQDGRRSIFRVRPLQYKGETIHLSDGTTIAANDWLLK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCEECCCEEEECCCCEEEECCEEEE IHLHNVRLVRELFRYDSDIKKGRYILEQVKSGLPYVAYHLYHHKHSERMKGIIGITMLNK EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GCERLGFETVDIANPLYRWFKTMALVPMMAVARPGLSPFGRPPKYLLMSKEKLFSLYGYH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LIH HCC >Mature Secondary Structure MLAMWGIIDPIYYACSRLEYAGEAQDGRRSIFRVRPLQYKGETIHLSDGTTIAANDWLLK CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEECCCEECCCEEEECCCCEEEECCEEEE IHLHNVRLVRELFRYDSDIKKGRYILEQVKSGLPYVAYHLYHHKHSERMKGIIGITMLNK EEEHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GCERLGFETVDIANPLYRWFKTMALVPMMAVARPGLSPFGRPPKYLLMSKEKLFSLYGYH HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH LIH HCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]