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The map label for this gene is cbiW [H]

Identifier: 138895355

GI number: 138895355

Start: 1788431

End: 1789027

Strand: Reverse

Name: cbiW [H]

Synonym: GTNG_1699

Alternate gene names: 138895355

Gene position: 1789027-1788431 (Counterclockwise)

Preceding gene: 138895356

Following gene: 138895354

Centisome position: 50.39

GC content: 56.11

Gene sequence:

>597_bases
TTGTTTGGATCGGACGGATGCCTACGGGACTATAGGCAGACGTGCGGGAGAATGACGGCTTTAGGGGCCCTGTTTGGGCC
GTTTACGGCTTTCGTATACATTTTTCTGCACCTCTGCTGTAGAGGTGCTTTTTCTTTTGTCGAAAAACCGTCCGTCTGCC
GCATTTCATTCTACCATTCTAGCAAAAGGGGGGATTTGGTGGCGACGTGGGATTTGCGGGGAATGAAGCATCATGTGCTC
ATTTGCAACGGAGGGACGTGCCTCCGCCATGGCGGAGATGACGTGACAACCGCGGTGCGCGAGGAAATCGCCCGCCTTGG
GCTTGACGACGCTGTCCATACAACAAGGACGCGCTGCAACGGCCGTTGCCAAGACGCATGCGTGATGATCGTCTACCCGG
ACGGCGTCTGGTACCGGCAGATGACGCCAGAGAAGGCGAAAGAAGTCGCGCGCGTCCATTTGGGTGAGGGTGTTCCGCTG
CGGGAGTGGGCGACGTATGAGTATGAAGGGGAATTGGTGTTGACGCCGATCGGCGAGCGTGAGGCGGCAAGTGGAAAACG
AAAAAACGAGCATATCGAGAAAGGAGCAAGCAGATAA

Upstream 100 bases:

>100_bases
GGTGCCCGCCACTGTGATGGGGAGCTTTGCGGCAACAAGTCACTGAAGGATGCTTCGGGAAGACGCCGCCAAGCGATGAT
CCTAAGTCAGGAGACCTGCC

Downstream 100 bases:

>100_bases
ATGAAAAGAACCGTTCGATGGAGCGGGATGATGGCTTTATTCGTTGTATATTTTTGGCTCACCAATGAAAACGAAGTAAA
TGCCATGCATATTATGGAAG

Product: putative ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MFGSDGCLRDYRQTCGRMTALGALFGPFTAFVYIFLHLCCRGAFSFVEKPSVCRISFYHSSKRGDLVATWDLRGMKHHVL
ICNGGTCLRHGGDDVTTAVREEIARLGLDDAVHTTRTRCNGRCQDACVMIVYPDGVWYRQMTPEKAKEVARVHLGEGVPL
REWATYEYEGELVLTPIGEREAASGKRKNEHIEKGASR

Sequences:

>Translated_198_residues
MFGSDGCLRDYRQTCGRMTALGALFGPFTAFVYIFLHLCCRGAFSFVEKPSVCRISFYHSSKRGDLVATWDLRGMKHHVL
ICNGGTCLRHGGDDVTTAVREEIARLGLDDAVHTTRTRCNGRCQDACVMIVYPDGVWYRQMTPEKAKEVARVHLGEGVPL
REWATYEYEGELVLTPIGEREAASGKRKNEHIEKGASR
>Mature_198_residues
MFGSDGCLRDYRQTCGRMTALGALFGPFTAFVYIFLHLCCRGAFSFVEKPSVCRISFYHSSKRGDLVATWDLRGMKHHVL
ICNGGTCLRHGGDDVTTAVREEIARLGLDDAVHTTRTRCNGRCQDACVMIVYPDGVWYRQMTPEKAKEVARVHLGEGVPL
REWATYEYEGELVLTPIGEREAASGKRKNEHIEKGASR

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG3411

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 2Fe2S Shethna-type ferredoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002023
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01257 Complex1_24kDa [H]

EC number: NA

Molecular weight: Translated: 22194; Mature: 22194

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGSDGCLRDYRQTCGRMTALGALFGPFTAFVYIFLHLCCRGAFSFVEKPSVCRISFYHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
SKRGDLVATWDLRGMKHHVLICNGGTCLRHGGDDVTTAVREEIARLGLDDAVHTTRTRCN
CCCCCEEEEEECCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
GRCQDACVMIVYPDGVWYRQMTPEKAKEVARVHLGEGVPLREWATYEYEGELVLTPIGER
CCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCHHHCCCEEECCCEEEEECCCC
EAASGKRKNEHIEKGASR
HHCCCCHHHHHHHCCCCC
>Mature Secondary Structure
MFGSDGCLRDYRQTCGRMTALGALFGPFTAFVYIFLHLCCRGAFSFVEKPSVCRISFYHS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEC
SKRGDLVATWDLRGMKHHVLICNGGTCLRHGGDDVTTAVREEIARLGLDDAVHTTRTRCN
CCCCCEEEEEECCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCC
GRCQDACVMIVYPDGVWYRQMTPEKAKEVARVHLGEGVPLREWATYEYEGELVLTPIGER
CCCCCEEEEEECCCCEEEECCCHHHHHHHHHHHCCCCCCHHHCCCEEECCCEEEEECCCC
EAASGKRKNEHIEKGASR
HHCCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9742225 [H]