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The map label for this gene is cbiM [H]

Identifier: 138895354

GI number: 138895354

Start: 1787687

End: 1788430

Strand: Reverse

Name: cbiM [H]

Synonym: GTNG_1698

Alternate gene names: 138895354

Gene position: 1788430-1787687 (Counterclockwise)

Preceding gene: 138895355

Following gene: 138895353

Centisome position: 50.37

GC content: 51.75

Gene sequence:

>744_bases
ATGAAAAGAACCGTTCGATGGAGCGGGATGATGGCTTTATTCGTTGTATATTTTTGGCTCACCAATGAAAACGAAGTAAA
TGCCATGCATATTATGGAAGGTTTTTTGCCTGTCAAATGGGCGCTGTTTTGGTGGATCCTGTTTTTGCCGTTTTTCTTGT
TTGGGCTGCGCAGGCTTGTTCATGCTTCGAAGCAGCATCTCGAGCATAAGCTCCTGATGGCTTTAGCTGGTGCGTTTACG
TTTGTGCTATCGGCGCTGAAAATCCCGTCGGTCACTGGCAGCAGTTCTCATCCGACCGGGATCGGGTTTGGATCCATTTT
GTTTGGGCCGTGGGTGATGGTGGTGATCGGTACGATCGTCCTTCTGTTTCAAGCGTTGCTTCTTGCCCATGGAGGGGTGA
CAACGCTTGGAGCGAACGCGATGTCGATGGCAATCATCGGACCTTTCGTCGCCTACGGGCTGTATCAATTGTGCCGAAAA
GGGGCGCTGTCAAATCGTGTTGCATTGTTTCTCGCCGCTTGCTTATCAGACTTGGCGACGTACGTCATGACTTCCCTGCA
GCTCGCCTTGGCGTTTCCCGCACCTGATGGCGGAATCGTGGCCTCATTTTGGAAATTTGCGGGCATCTTCGCGATCACGC
AAGTGCCGTTGGCGGTGACAGAAGGCATTGTAACGGTGATCGTCTGGAACTGGCTTGCTTCCTACCAAGCTTCTCCGCTG
TTCCAAAGAGAAAAGGGGGCGTGA

Upstream 100 bases:

>100_bases
TGAGTATGAAGGGGAATTGGTGTTGACGCCGATCGGCGAGCGTGAGGCGGCAAGTGGAAAACGAAAAAACGAGCATATCG
AGAAAGGAGCAAGCAGATAA

Downstream 100 bases:

>100_bases
GGATATGAAGAAAAATGGTTTGCTCATCTTGCTCGCTGCTTTGCTCATCATCGGGCCGCTTTGGTGGGCGCGCGGATCGG
AGTTCGGAGGAACAGACGAC

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MKRTVRWSGMMALFVVYFWLTNENEVNAMHIMEGFLPVKWALFWWILFLPFFLFGLRRLVHASKQHLEHKLLMALAGAFT
FVLSALKIPSVTGSSSHPTGIGFGSILFGPWVMVVIGTIVLLFQALLLAHGGVTTLGANAMSMAIIGPFVAYGLYQLCRK
GALSNRVALFLAACLSDLATYVMTSLQLALAFPAPDGGIVASFWKFAGIFAITQVPLAVTEGIVTVIVWNWLASYQASPL
FQREKGA

Sequences:

>Translated_247_residues
MKRTVRWSGMMALFVVYFWLTNENEVNAMHIMEGFLPVKWALFWWILFLPFFLFGLRRLVHASKQHLEHKLLMALAGAFT
FVLSALKIPSVTGSSSHPTGIGFGSILFGPWVMVVIGTIVLLFQALLLAHGGVTTLGANAMSMAIIGPFVAYGLYQLCRK
GALSNRVALFLAACLSDLATYVMTSLQLALAFPAPDGGIVASFWKFAGIFAITQVPLAVTEGIVTVIVWNWLASYQASPL
FQREKGA
>Mature_247_residues
MKRTVRWSGMMALFVVYFWLTNENEVNAMHIMEGFLPVKWALFWWILFLPFFLFGLRRLVHASKQHLEHKLLMALAGAFT
FVLSALKIPSVTGSSSHPTGIGFGSILFGPWVMVVIGTIVLLFQALLLAHGGVTTLGANAMSMAIIGPFVAYGLYQLCRK
GALSNRVALFLAACLSDLATYVMTSLQLALAFPAPDGGIVASFWKFAGIFAITQVPLAVTEGIVTVIVWNWLASYQASPL
FQREKGA

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 27077; Mature: 27077

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure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CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]