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The map label for this gene is rtp [H]

Identifier: 138895288

GI number: 138895288

Start: 1719135

End: 1719509

Strand: Reverse

Name: rtp [H]

Synonym: GTNG_1632

Alternate gene names: 138895288

Gene position: 1719509-1719135 (Counterclockwise)

Preceding gene: 138895289

Following gene: 138895287

Centisome position: 48.43

GC content: 46.93

Gene sequence:

>375_bases
ATGGGAGAGAAACGGACGCCAAGCGGTTTTCTGTTAAAACAACGTGCGTTTTTAAAATTGTATTTGATCACGTTAACGGA
GCAGGAGCGGCTGTACGGACTGAAGTTGCTCGATGTATTGCGCCAAGAGTTTAAACCGCTCGGCTATCGTCCGAACCATT
CAGAAGTGTACAAGGCGCTTCACGATTTAATCGAAGACGGCATTTTAAAGCAAGTGAAACAGAAAAAAGAAGGGATGAAG
TACCAGGAAGTCGTGTATTATCGGTTTGCCGAGGGTGGGCAAGAAAAAGCGAAGCTGTATAAACGTCAGCTGAAAGCAGA
GCTTGACCGGTGTGCGGCGCTCATCCGCAAAGCCATTGAGGACAACTATAGCTAG

Upstream 100 bases:

>100_bases
TTTCCTTTCCCGCATGGTATAATGAAAAGAAAACGGAATCAAACAGCCCTTTGCTCTCGGTTAGGTGAATGGAACATCAG
GGAAAGGAGGAAAAAAATCG

Downstream 100 bases:

>100_bases
GGGCGCCCTTGTTTTTTCTTTTTATCCTATTTACATAATATAATTATGGTTTATTTATTTTGTTTTGCGTCCTGACGGGC
GATTTAGTAGAATGAGAGGG

Product: replication terminator protein

Products: NA

Alternate protein names: Replication terminator protein [H]

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MGEKRTPSGFLLKQRAFLKLYLITLTEQERLYGLKLLDVLRQEFKPLGYRPNHSEVYKALHDLIEDGILKQVKQKKEGMK
YQEVVYYRFAEGGQEKAKLYKRQLKAELDRCAALIRKAIEDNYS

Sequences:

>Translated_124_residues
MGEKRTPSGFLLKQRAFLKLYLITLTEQERLYGLKLLDVLRQEFKPLGYRPNHSEVYKALHDLIEDGILKQVKQKKEGMK
YQEVVYYRFAEGGQEKAKLYKRQLKAELDRCAALIRKAIEDNYS
>Mature_123_residues
GEKRTPSGFLLKQRAFLKLYLITLTEQERLYGLKLLDVLRQEFKPLGYRPNHSEVYKALHDLIEDGILKQVKQKKEGMKY
QEVVYYRFAEGGQEKAKLYKRQLKAELDRCAALIRKAIEDNYS

Specific function: Plays a role in DNA replication and termination (fork arrest mechanism). Two dimers of rtp bind to the two inverted repeat regions (IRI and IRII) present in the termination site. The binding of each dimer is centered on an 8 bp direct repeat [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14642; Mature: 14511

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEKRTPSGFLLKQRAFLKLYLITLTEQERLYGLKLLDVLRQEFKPLGYRPNHSEVYKAL
CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
HDLIEDGILKQVKQKKEGMKYQEVVYYRFAEGGQEKAKLYKRQLKAELDRCAALIRKAIE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNYS
CCCC
>Mature Secondary Structure 
GEKRTPSGFLLKQRAFLKLYLITLTEQERLYGLKLLDVLRQEFKPLGYRPNHSEVYKAL
CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
HDLIEDGILKQVKQKKEGMKYQEVVYYRFAEGGQEKAKLYKRQLKAELDRCAALIRKAIE
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DNYS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2493444; 1849493 [H]