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The map label for this gene is yrhP [H]

Identifier: 138895246

GI number: 138895246

Start: 1676436

End: 1677059

Strand: Reverse

Name: yrhP [H]

Synonym: GTNG_1588

Alternate gene names: 138895246

Gene position: 1677059-1676436 (Counterclockwise)

Preceding gene: 138895251

Following gene: 138895244

Centisome position: 47.24

GC content: 38.3

Gene sequence:

>624_bases
ATGGATTTTGCACTAACCATATCCTTTTTAGGAGTAGCTATATTGCTGACGTTAATGCCCGGGCCAGATATTCTGTTTGT
GATTGCTCAAAGTATTTCACAGGACAAAAAAGCGGGAATCGCAACGGCACTGGGACTTTGTTCAGGCCTTATTGTACATA
TCACGGCTGCAACGCTTGGGATTTCAACGATCATTTATCAATCCGCTCTGGCTTTTACCGTCATAAAATATACGGGTGCG
GCGTATTTGCTGTATTTAGCATGGCAATCATTTAAGGAAAAAGAAACAGGCTTTACGATTAACCATAACAAGCCTTTAAA
GTATCCATCATTGTATAAAAAAGGAATTCTCATGAATCTGCTTAATCCAAAAGTATCATTGTTCTTTTTGGCATTGCTGC
CTCAATTTGTGAATAAATCGCTGGGGCACATTACGTTACAGATGTTTATTTTGGGAATTATTTTTCTGGTTCAGGCTTTA
GTGATTTTTATCGCTGTCAGCGTGTTTTCAAAGAAATTGCGCCATGTCCTGCTTACCAATTCGTTCATAGCAAAGCGAAT
GAACATTGTAAAAGTTTTGTTATTAGGGCTGATTGGTATACAGATTGCGTTTAGTGAAAAGTGA

Upstream 100 bases:

>100_bases
AGAAGGAATGAAGCAGTTTCCCTCGAAATAAATCAGGAAGACAAATGAAGAAAAAGGAAGCAAAGAATGGTGTCCATTCC
ATCCAAGAGAGGTGTTGTAA

Downstream 100 bases:

>100_bases
AATCGTTAGAGTGTTATCTTTTAATAAATGTCTCTGTTCAATTTCAATGTTGATTTTTAGACCACAGAAAAAGACCGAAA
TCAATCGGTCTTTTTTGTAT

Product: amino acid efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDFALTISFLGVAILLTLMPGPDILFVIAQSISQDKKAGIATALGLCSGLIVHITAATLGISTIIYQSALAFTVIKYTGA
AYLLYLAWQSFKEKETGFTINHNKPLKYPSLYKKGILMNLLNPKVSLFFLALLPQFVNKSLGHITLQMFILGIIFLVQAL
VIFIAVSVFSKKLRHVLLTNSFIAKRMNIVKVLLLGLIGIQIAFSEK

Sequences:

>Translated_207_residues
MDFALTISFLGVAILLTLMPGPDILFVIAQSISQDKKAGIATALGLCSGLIVHITAATLGISTIIYQSALAFTVIKYTGA
AYLLYLAWQSFKEKETGFTINHNKPLKYPSLYKKGILMNLLNPKVSLFFLALLPQFVNKSLGHITLQMFILGIIFLVQAL
VIFIAVSVFSKKLRHVLLTNSFIAKRMNIVKVLLLGLIGIQIAFSEK
>Mature_207_residues
MDFALTISFLGVAILLTLMPGPDILFVIAQSISQDKKAGIATALGLCSGLIVHITAATLGISTIIYQSALAFTVIKYTGA
AYLLYLAWQSFKEKETGFTINHNKPLKYPSLYKKGILMNLLNPKVSLFFLALLPQFVNKSLGHITLQMFILGIIFLVQAL
VIFIAVSVFSKKLRHVLLTNSFIAKRMNIVKVLLLGLIGIQIAFSEK

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=143, Percent_Identity=32.8671328671329, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI48994979, Length=173, Percent_Identity=26.5895953757225, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1786522, Length=123, Percent_Identity=28.4552845528455, Blast_Score=74, Evalue=9e-15,
Organism=Escherichia coli, GI48994978, Length=167, Percent_Identity=28.7425149700599, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22733; Mature: 22733

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFALTISFLGVAILLTLMPGPDILFVIAQSISQDKKAGIATALGLCSGLIVHITAATLG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTIIYQSALAFTVIKYTGAAYLLYLAWQSFKEKETGFTINHNKPLKYPSLYKKGILMNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH
LNPKVSLFFLALLPQFVNKSLGHITLQMFILGIIFLVQALVIFIAVSVFSKKLRHVLLTN
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIAKRMNIVKVLLLGLIGIQIAFSEK
HHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MDFALTISFLGVAILLTLMPGPDILFVIAQSISQDKKAGIATALGLCSGLIVHITAATLG
CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISTIIYQSALAFTVIKYTGAAYLLYLAWQSFKEKETGFTINHNKPLKYPSLYKKGILMNL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHHH
LNPKVSLFFLALLPQFVNKSLGHITLQMFILGIIFLVQALVIFIAVSVFSKKLRHVLLTN
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFIAKRMNIVKVLLLGLIGIQIAFSEK
HHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]