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The map label for this gene is tnpA [H]

Identifier: 138895244

GI number: 138895244

Start: 1673068

End: 1674258

Strand: Reverse

Name: tnpA [H]

Synonym: GTNG_1584

Alternate gene names: 138895244

Gene position: 1674258-1673068 (Counterclockwise)

Preceding gene: 138895246

Following gene: 138895239

Centisome position: 47.16

GC content: 44.08

Gene sequence:

>1191_bases
GTGCTTTCTATATCACTAGGATTGCCAGAATTTAAAGTTATTAAACACGAACTTCTTTCCTATGGTTATGCGATTCATGT
AGAGAAAACAGAGACACAGGAACGTTGCCCTCATTGTGGGTTTGCTACTTCCTCTGTCCACGACAGACGGACAAGAAAAG
TACGGGATTTGGCGATTTTCCATCAACCGGTGTACTTGTTCGTAAAGGTAAAGCGCTATCGGTGCTGGAATTGTTCCCAA
GTGTTTTCCGCCTCTTTGGAATCGATTCCACCCAATCAACACTACACCAATCGATTTTGTGAGTACTTGTATGAACTTTG
CGAAGGCTCCACCATTCAAGAGGTTAGCCGAAAGCACCGTATTCCATATACAACATTGGAACGCATTTATTACTCCATCG
CATCGAAAAAAGCAAAAGAGCGTCAAACAGCGACGGAGGTCTCTTCTCCAGAAGGAATGGTGCTTAGTTTAGATGAAATC
GCTGTAAAAAAGGGACATCAGTATGAAACCGTATTGATGGATGCCAGAGCCGGATCGGTCATGGGAATGCATGCCGATCG
CCAATGTGACTCCGCCATCAACTTGTTGAGCCAAAATGGCCTATCGAAAGAAATGGTCCAAACGGTGATTCTTGACATGT
GGGAACCTTATCATAAGGCGGTTCGCGCCCTGTTTCCATCTGCTTCGATTGTCATCGATAAGTACCATGTGGTTCAAAAA
GTGACACAAGCCTTGGATCAAGCAAGAAAGGAATTTTCTCCATTGAAAAAGGCTCGATATCTTCTCTTAAAAGGCTGTGA
AAAGCTTCGTAAGGACCAACGGCTTCGATTAGACGATATCTTGGAGGAGTATCCGGTACTTTCCATTGCTTATTATCTGA
AAGAGTTGTTTCGGGATTTTTACCGAACCGATGGATATAACGAAGCAAAGGAACGCTTGGAAGAATGGATTAAGTTAGCC
AAACAGAGCCCTTTTGCTTCTTTTCAGGAAGCAGCCAACACGCTTGAAAGGTGGAAAGAGCCTATTCTTTCCTACTTTTT
GTGCCCATATACGAATGCCCGAATCGAGGGGACGAATCACAAGATCAAAAACATCAAACGCCGGGCATATGGCTATCGAA
ATCTAGAACGGTTTCGTTTGCGTGTATTTCTGGAGTGTACAGGGAACACTACAGGTAGTCAGGCTGCCTAA

Upstream 100 bases:

>100_bases
CATCACCAAATTTTGTGATTTAGTGACAAAAAAGAGAAAGCACTGACGAGATCCTGGCAATAATGTTAGCGGTGAAATAA
ACATTAGGGAGGTCTCGTAA

Downstream 100 bases:

>100_bases
GCACTCCCTTCTTCCGCTATCGGTATGATAGTTGGTAGAATGGAACCCGTCAAGGAAAGCACTTGACTGTTTCCATTCTA
CCAACTTCGTGGTGTATGCG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MLSISLGLPEFKVIKHELLSYGYAIHVEKTETQERCPHCGFATSSVHDRRTRKVRDLAIFHQPVYLFVKVKRYRCWNCSQ
VFSASLESIPPNQHYTNRFCEYLYELCEGSTIQEVSRKHRIPYTTLERIYYSIASKKAKERQTATEVSSPEGMVLSLDEI
AVKKGHQYETVLMDARAGSVMGMHADRQCDSAINLLSQNGLSKEMVQTVILDMWEPYHKAVRALFPSASIVIDKYHVVQK
VTQALDQARKEFSPLKKARYLLLKGCEKLRKDQRLRLDDILEEYPVLSIAYYLKELFRDFYRTDGYNEAKERLEEWIKLA
KQSPFASFQEAANTLERWKEPILSYFLCPYTNARIEGTNHKIKNIKRRAYGYRNLERFRLRVFLECTGNTTGSQAA

Sequences:

>Translated_396_residues
MLSISLGLPEFKVIKHELLSYGYAIHVEKTETQERCPHCGFATSSVHDRRTRKVRDLAIFHQPVYLFVKVKRYRCWNCSQ
VFSASLESIPPNQHYTNRFCEYLYELCEGSTIQEVSRKHRIPYTTLERIYYSIASKKAKERQTATEVSSPEGMVLSLDEI
AVKKGHQYETVLMDARAGSVMGMHADRQCDSAINLLSQNGLSKEMVQTVILDMWEPYHKAVRALFPSASIVIDKYHVVQK
VTQALDQARKEFSPLKKARYLLLKGCEKLRKDQRLRLDDILEEYPVLSIAYYLKELFRDFYRTDGYNEAKERLEEWIKLA
KQSPFASFQEAANTLERWKEPILSYFLCPYTNARIEGTNHKIKNIKRRAYGYRNLERFRLRVFLECTGNTTGSQAA
>Mature_396_residues
MLSISLGLPEFKVIKHELLSYGYAIHVEKTETQERCPHCGFATSSVHDRRTRKVRDLAIFHQPVYLFVKVKRYRCWNCSQ
VFSASLESIPPNQHYTNRFCEYLYELCEGSTIQEVSRKHRIPYTTLERIYYSIASKKAKERQTATEVSSPEGMVLSLDEI
AVKKGHQYETVLMDARAGSVMGMHADRQCDSAINLLSQNGLSKEMVQTVILDMWEPYHKAVRALFPSASIVIDKYHVVQK
VTQALDQARKEFSPLKKARYLLLKGCEKLRKDQRLRLDDILEEYPVLSIAYYLKELFRDFYRTDGYNEAKERLEEWIKLA
KQSPFASFQEAANTLERWKEPILSYFLCPYTNARIEGTNHKIKNIKRRAYGYRNLERFRLRVFLECTGNTTGSQAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 46162; Mature: 46162

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSISLGLPEFKVIKHELLSYGYAIHVEKTETQERCPHCGFATSSVHDRRTRKVRDLAIF
CEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
HQPVYLFVKVKRYRCWNCSQVFSASLESIPPNQHYTNRFCEYLYELCEGSTIQEVSRKHR
HCCHHEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC
IPYTTLERIYYSIASKKAKERQTATEVSSPEGMVLSLDEIAVKKGHQYETVLMDARAGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCHHEEEECCCCCE
MGMHADRQCDSAINLLSQNGLSKEMVQTVILDMWEPYHKAVRALFPSASIVIDKYHVVQK
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VTQALDQARKEFSPLKKARYLLLKGCEKLRKDQRLRLDDILEEYPVLSIAYYLKELFRDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
YRTDGYNEAKERLEEWIKLAKQSPFASFQEAANTLERWKEPILSYFLCPYTNARIEGTNH
HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCH
KIKNIKRRAYGYRNLERFRLRVFLECTGNTTGSQAA
HHHHHHHHHHCHHHHHHEEEEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLSISLGLPEFKVIKHELLSYGYAIHVEKTETQERCPHCGFATSSVHDRRTRKVRDLAIF
CEEECCCCCHHHHHHHHHHHCCCEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
HQPVYLFVKVKRYRCWNCSQVFSASLESIPPNQHYTNRFCEYLYELCEGSTIQEVSRKHR
HCCHHEEEEEHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCC
IPYTTLERIYYSIASKKAKERQTATEVSSPEGMVLSLDEIAVKKGHQYETVLMDARAGSV
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHCCCCCHHEEEECCCCCE
MGMHADRQCDSAINLLSQNGLSKEMVQTVILDMWEPYHKAVRALFPSASIVIDKYHVVQK
ECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
VTQALDQARKEFSPLKKARYLLLKGCEKLRKDQRLRLDDILEEYPVLSIAYYLKELFRDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHH
YRTDGYNEAKERLEEWIKLAKQSPFASFQEAANTLERWKEPILSYFLCPYTNARIEGTNH
HHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCH
KIKNIKRRAYGYRNLERFRLRVFLECTGNTTGSQAA
HHHHHHHHHHCHHHHHHEEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]