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The map label for this gene is deoD [H]

Identifier: 138895089

GI number: 138895089

Start: 1514978

End: 1515688

Strand: Direct

Name: deoD [H]

Synonym: GTNG_1427

Alternate gene names: 138895089

Gene position: 1514978-1515688 (Clockwise)

Preceding gene: 138895088

Following gene: 138895090

Centisome position: 42.67

GC content: 54.01

Gene sequence:

>711_bases
TTGAGCGTTCATATCGGAGCAAAGCCAGGGGAGATTGCCGAACATATTTTGCTGCCGGGCGACCCGCTGCGTGCCAAATA
TATTGCTGAAACGTTTTTGGAAGGGGCGGTATGCTACAACGAAGTGCGCGGCATGCTCGGTTTTACCGGAACGTATAAAG
GGCATCGCATTTCCGTACAAGGAACCGGGATGGGAGTTCCATCGATTTCAATCTATGTTAATGAATTGATTCAAAGCTAT
GGGGTCAAGACGCTCATCCGCGTCGGCACGTGTGGGGCGATTCAGCCGGATGTGCGCGTGCGCGACGTGATTTTGGCGAT
GAGCGCATCAACGGATTCGAACATGAACCGGCTCATTTTCCGCGGCCGCGATTATGCGCCGACAGCTGATTTCCACTTGC
TGCGGACGGCATACGACGTTGGCATGGAAAAAGGGCTGGCACTTAAAGTCGGCAACGTCTTTACTGCGGATATGTTTTAC
AACGATGAGCCGAATTGGGAAACGTGGGCGCGTTACGGCGTGTTGGCCGTTGAGATGGAAACAGCGGCGCTCTATACGCT
GGCGGCGAAATTCGACTGCCGGGCGTTGTCTGTGCTGACCGTGAGCGATCATATTATCACTGGGGAAGAAACGACAGCCG
AGGAACGGCAAACGACGTTTAACGACATGATTGAAGTGGCGCTCGAAGCGGCGAGCCGCAACGATGCGTAA

Upstream 100 bases:

>100_bases
GATTGCCCCCACAGCTACTCGAGATAAGACTGCCATTTTCCGCAAACATATGATATGATAAACAACGTCTAGCTTGATCA
TGATAGAAGGAGGAATTGCA

Downstream 100 bases:

>100_bases
CAGTTGTGCCGAGACCGTCTAGCGCGCTTCAAGAAACAGAAAAGGGGAAGACGAATGAACCAACGATGGAAAATAGCAAT
GTTGGCGTGCCTGCTGCTCG

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MSVHIGAKPGEIAEHILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGHRISVQGTGMGVPSISIYVNELIQSY
GVKTLIRVGTCGAIQPDVRVRDVILAMSASTDSNMNRLIFRGRDYAPTADFHLLRTAYDVGMEKGLALKVGNVFTADMFY
NDEPNWETWARYGVLAVEMETAALYTLAAKFDCRALSVLTVSDHIITGEETTAEERQTTFNDMIEVALEAASRNDA

Sequences:

>Translated_236_residues
MSVHIGAKPGEIAEHILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGHRISVQGTGMGVPSISIYVNELIQSY
GVKTLIRVGTCGAIQPDVRVRDVILAMSASTDSNMNRLIFRGRDYAPTADFHLLRTAYDVGMEKGLALKVGNVFTADMFY
NDEPNWETWARYGVLAVEMETAALYTLAAKFDCRALSVLTVSDHIITGEETTAEERQTTFNDMIEVALEAASRNDA
>Mature_235_residues
SVHIGAKPGEIAEHILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGHRISVQGTGMGVPSISIYVNELIQSYG
VKTLIRVGTCGAIQPDVRVRDVILAMSASTDSNMNRLIFRGRDYAPTADFHLLRTAYDVGMEKGLALKVGNVFTADMFYN
DEPNWETWARYGVLAVEMETAALYTLAAKFDCRALSVLTVSDHIITGEETTAEERQTTFNDMIEVALEAASRNDA

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=233, Percent_Identity=56.6523605150215, Blast_Score=276, Evalue=9e-76,
Organism=Escherichia coli, GI1790265, Length=232, Percent_Identity=31.0344827586207, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25898; Mature: 25767

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVHIGAKPGEIAEHILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGHRISVQ
CEEECCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGVPSISIYVNELIQSYGVKTLIRVGTCGAIQPDVRVRDVILAMSASTDSNMNRLIF
ECCCCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
RGRDYAPTADFHLLRTAYDVGMEKGLALKVGNVFTADMFYNDEPNWETWARYGVLAVEME
ECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCHHHHHHHCEEEEEEH
TAALYTLAAKFDCRALSVLTVSDHIITGEETTAEERQTTFNDMIEVALEAASRNDA
HHHEEHHHHCCCCEEEEEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVHIGAKPGEIAEHILLPGDPLRAKYIAETFLEGAVCYNEVRGMLGFTGTYKGHRISVQ
EEECCCCCHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
GTGMGVPSISIYVNELIQSYGVKTLIRVGTCGAIQPDVRVRDVILAMSASTDSNMNRLIF
ECCCCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCEEEE
RGRDYAPTADFHLLRTAYDVGMEKGLALKVGNVFTADMFYNDEPNWETWARYGVLAVEME
ECCCCCCCCHHHHHHHHHHHHHCCCCEEEECCEEEEEEEECCCCCHHHHHHHCEEEEEEH
TAALYTLAAKFDCRALSVLTVSDHIITGEETTAEERQTTFNDMIEVALEAASRNDA
HHHEEHHHHCCCCEEEEEEEEECEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA