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The map label for this gene is yprB [H]

Identifier: 138895051

GI number: 138895051

Start: 1477478

End: 1478752

Strand: Direct

Name: yprB [H]

Synonym: GTNG_1389

Alternate gene names: 138895051

Gene position: 1477478-1478752 (Clockwise)

Preceding gene: 138895050

Following gene: 138895052

Centisome position: 41.62

GC content: 55.53

Gene sequence:

>1275_bases
ATGAAACCGAAGCTGTCGCAGTGGAAAGAGCTGCTTGCCGCTCGGCACAAAAAAAAGACGGCGGATGAAAAGAACGAAAT
GGAACCGAGCGAACGTGGGGCGACGGACGTGCCTTATGTTGACATTTGGCAGGAATACGGGACGAAGCCGTACTGGTTTG
CCGGGGATTATTGCCTCATCCGGGAGACGGTGTACCCGCTTGATTATCAGCATGGCTGCTACCGTCTTGGGGCGCTGCAT
GATGTGCACCGGCGCTGGCAGGAAGCGTCGTTTTCCCACCCGCTCTCGTGCCGCGGATTCGCTGTTAGCGACCTATTCTT
TTTTGACACAGAAACGATGGGGCTTTCAAGCGGAGTGGGAACGGTCATGTTTCTGCTCGGCCATGCCCGCGTCCTTGGCG
ATCGCATCATCATCCGCCAGCACGTTTTGCCGCATCCGGGGGCGGAGGTGGCGCTGTATCAAAGCTTTTTATCCGATGTC
GACTATACGACTCTTGTTACGTATAATGGAAAGGCGTTCGACTGGCCGCGGCTAAAAACACGCCATGCCCTTGTCCGCGA
CATGGTGCCGAAGCTGCCGGCGTTTGGTCACTTTGATTTGTATCACGCCGCTCGTCGTTTATGGAAAGACAAGCTCGATT
CGCTTCGCCTAGCGGAGGTCGAAAAGCACATTCTTCAGATTGAGCGGGATGATGATGTGCCCGGCTTTTTGGCACCGATG
ATATACCAGGAATTTTTGCAAACGCCTCATCCGGATCGGATTATGCCGGTATTGCGCCACAACGAACAAGACGTGTTGTC
GCTCATTGCGCTCTACATCCATTTATCGATTCAGTTGCTCGAAGCGATGCAGATCTCTGACCCGCGGGAGCAGCTGGCCG
CGGCCCGTTGGCTCGAAGCGGTGGGGGAAACGGCGGCTGCTCGGGGCGTGTATGAACAAGCGAGCAGCAAAGAGGTGAAA
GAAGCGCAGGCGGCGAAATGGCAGCTGTCGCTTTTGTATCGGAGAGAAAGGCGCTATGAAGAGGCGGTTGCCATTTGGCG
CGACTTGTTCAATCATGGAAGCGCCTCTTGGAAGACGAAAGCCGGTCTTGAGCTGGCAAAAGCGTATGAGCATCATTTTC
GCGATGCAGCCGAAGCGCACCGCTATGCCGCCGCAGCGTATGAAGCCTGGCGCTCGCTTGCCAAAGCAAGTCGGCAAGGC
ATGGAGAAGGAGGAACAGGAGTGGCGCAAGCGGCTTGAGCGGTTAACGCGCAAGAAAAATAAGTTAGGGAAATGA

Upstream 100 bases:

>100_bases
AGCTTGAGTGCCAGCGGGCGGGGAAACTAAAGCGGCTTTCTTGAGCGTTCGCGCGCTAAATTTATAGGAGGAAGAGAGCG
AGCGGAAAGGAGGAGGGTGA

Downstream 100 bases:

>100_bases
TAGGCCCATTTCCCTGGCAAGCGCAAAATATGACAGAAAAATAAAAAAATTTTCCTTTTCGTTTCGAATCTTGTAGAAAA
AAAGAAAAATGTGTACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MKPKLSQWKELLAARHKKKTADEKNEMEPSERGATDVPYVDIWQEYGTKPYWFAGDYCLIRETVYPLDYQHGCYRLGALH
DVHRRWQEASFSHPLSCRGFAVSDLFFFDTETMGLSSGVGTVMFLLGHARVLGDRIIIRQHVLPHPGAEVALYQSFLSDV
DYTTLVTYNGKAFDWPRLKTRHALVRDMVPKLPAFGHFDLYHAARRLWKDKLDSLRLAEVEKHILQIERDDDVPGFLAPM
IYQEFLQTPHPDRIMPVLRHNEQDVLSLIALYIHLSIQLLEAMQISDPREQLAAARWLEAVGETAAARGVYEQASSKEVK
EAQAAKWQLSLLYRRERRYEEAVAIWRDLFNHGSASWKTKAGLELAKAYEHHFRDAAEAHRYAAAAYEAWRSLAKASRQG
MEKEEQEWRKRLERLTRKKNKLGK

Sequences:

>Translated_424_residues
MKPKLSQWKELLAARHKKKTADEKNEMEPSERGATDVPYVDIWQEYGTKPYWFAGDYCLIRETVYPLDYQHGCYRLGALH
DVHRRWQEASFSHPLSCRGFAVSDLFFFDTETMGLSSGVGTVMFLLGHARVLGDRIIIRQHVLPHPGAEVALYQSFLSDV
DYTTLVTYNGKAFDWPRLKTRHALVRDMVPKLPAFGHFDLYHAARRLWKDKLDSLRLAEVEKHILQIERDDDVPGFLAPM
IYQEFLQTPHPDRIMPVLRHNEQDVLSLIALYIHLSIQLLEAMQISDPREQLAAARWLEAVGETAAARGVYEQASSKEVK
EAQAAKWQLSLLYRRERRYEEAVAIWRDLFNHGSASWKTKAGLELAKAYEHHFRDAAEAHRYAAAAYEAWRSLAKASRQG
MEKEEQEWRKRLERLTRKKNKLGK
>Mature_424_residues
MKPKLSQWKELLAARHKKKTADEKNEMEPSERGATDVPYVDIWQEYGTKPYWFAGDYCLIRETVYPLDYQHGCYRLGALH
DVHRRWQEASFSHPLSCRGFAVSDLFFFDTETMGLSSGVGTVMFLLGHARVLGDRIIIRQHVLPHPGAEVALYQSFLSDV
DYTTLVTYNGKAFDWPRLKTRHALVRDMVPKLPAFGHFDLYHAARRLWKDKLDSLRLAEVEKHILQIERDDDVPGFLAPM
IYQEFLQTPHPDRIMPVLRHNEQDVLSLIALYIHLSIQLLEAMQISDPREQLAAARWLEAVGETAAARGVYEQASSKEVK
EAQAAKWQLSLLYRRERRYEEAVAIWRDLFNHGSASWKTKAGLELAKAYEHHFRDAAEAHRYAAAAYEAWRSLAKASRQG
MEKEEQEWRKRLERLTRKKNKLGK

Specific function: Unknown

COG id: COG3359

COG function: function code L; Predicted exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012337
- InterPro:   IPR011990 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49232; Mature: 49232

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKLSQWKELLAARHKKKTADEKNEMEPSERGATDVPYVDIWQEYGTKPYWFAGDYCLI
CCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCHHHHHHHHCCCCEEECCCEEEE
RETVYPLDYQHGCYRLGALHDVHRRWQEASFSHPLSCRGFAVSDLFFFDTETMGLSSGVG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHEECCHHCCCCCHHH
TVMFLLGHARVLGDRIIIRQHVLPHPGAEVALYQSFLSDVDYTTLVTYNGKAFDWPRLKT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH
RHALVRDMVPKLPAFGHFDLYHAARRLWKDKLDSLRLAEVEKHILQIERDDDVPGFLAPM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IYQEFLQTPHPDRIMPVLRHNEQDVLSLIALYIHLSIQLLEAMQISDPREQLAAARWLEA
HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VGETAAARGVYEQASSKEVKEAQAAKWQLSLLYRRERRYEEAVAIWRDLFNHGSASWKTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AGLELAKAYEHHFRDAAEAHRYAAAAYEAWRSLAKASRQGMEKEEQEWRKRLERLTRKKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KLGK
CCCC
>Mature Secondary Structure
MKPKLSQWKELLAARHKKKTADEKNEMEPSERGATDVPYVDIWQEYGTKPYWFAGDYCLI
CCCCHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCCCCHHHHHHHHCCCCEEECCCEEEE
RETVYPLDYQHGCYRLGALHDVHRRWQEASFSHPLSCRGFAVSDLFFFDTETMGLSSGVG
HHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHEECCHHCCCCCHHH
TVMFLLGHARVLGDRIIIRQHVLPHPGAEVALYQSFLSDVDYTTLVTYNGKAFDWPRLKT
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHH
RHALVRDMVPKLPAFGHFDLYHAARRLWKDKLDSLRLAEVEKHILQIERDDDVPGFLAPM
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
IYQEFLQTPHPDRIMPVLRHNEQDVLSLIALYIHLSIQLLEAMQISDPREQLAAARWLEA
HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
VGETAAARGVYEQASSKEVKEAQAAKWQLSLLYRRERRYEEAVAIWRDLFNHGSASWKTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH
AGLELAKAYEHHFRDAAEAHRYAAAAYEAWRSLAKASRQGMEKEEQEWRKRLERLTRKKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
KLGK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377; 3145906 [H]