| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138894947
Identifier: 138894947
GI number: 138894947
Start: 1363245
End: 1364861
Strand: Direct
Name: 138894947
Synonym: GTNG_1285
Alternate gene names: NA
Gene position: 1363245-1364861 (Clockwise)
Preceding gene: 138894944
Following gene: 138894948
Centisome position: 38.4
GC content: 48.67
Gene sequence:
>1617_bases ATGGGGTACGGCTTTCCTCTGACAGTCGCCGATGTTTTACAGAGGAAGTATTTCCAAAAGGCGGTCGTTATTGCTGGAAA AGAAGGACTGTCAAGGACGGTCAAATGGGTGCATGTTGTTGAGGTCACGAAAATCAGCAATTTGTTGCGCGGCAAAGAGC TCATTTTGTCTACCGGTGTCGGGTGGCGGGAAGATGACTCATTGTTTTTATCGCTGCTTCGGCAGCTGATCGAATGTGAT GCTTCCGGGCTATGCATCGAATTGGGAACGTATGCCTCCTCCATTCCAAAGGAGGCACTGGAACTGGCTAACCGTCATCA TTTCCCGCTCATTCTTTTTCTTGAGGAAGTTCCTTTCGTCGAGATTACTCACGATATTCACACGTATTTAATTAATCAGC AGTATCAAATGATCGCTCAGCTCGAGTCGTATTCTCAAGAGTTGAACAAAAAGCTGTTGACGGTTCATCATTATCGGGAG ATTTTAACATTTTTGCACAGCTGCCTAGGCCATCAGGTTGTTTTCCACATGCACGGCGGGGATGTGGAATACATACCGAG CCGGCCAAGGGGGAATTTGGGGGCAGGTGTTGGGCTTGGAGGAGAAAGCGACTGGCCATCAGCTGCGGTCGTCAAGCCGA TTTCGTTATTTGGTGCTGAATACGCGGAGTTGGCCCTTCTTCCTGTCGGACGGGACATCAACGAGTTTGATTTGCTCATT TTGGATCGCACCGCAACAGCGCTGGCCCAGCACTTGTTGCGGAACCTTTACGTCGAGGAGAGGCGGCGCACCGAAGAAAA TGAGTGGCTAAAGGGCTGGATTGAAGGAGAGTACTCCGATCAAGAGATTTCTTCCTATTTATTAGACCATCATCCTTCCC TTCATAGCCGCGGGGGAGTGGTATGGGTTTGTAAAGTGGGGACGGCGGGTCAAAAAGGAAACTTTGATTCAACATATTTT AAGCTGTTATGCCGTTCGCTGTTTGAGCAACGCGGGTTTCTCTTATTTTCGGTAGAGATGGGACGCCACCTTGCGTTTAT TGCCATCAATCTTCGGGATGAGGAGACGTGGAAGAGCCGGATCGAGGAAGGAATCAAATGTCTCATGGCATCGGACTTTA TGCAAACACGACTTTCCGCCTTGCCGGTCGGCGTCGGAACGTTTGTCCCATCTCTTTCTTCCATCAATCAAAGCTACCGC GCTGCGCTAGAGGCGCTGAAAATTCGCAGTCGGTTGGACGAACAGGGAGCTAGCCTGTTTTACGATGATTTGCATTTATA CCGGATGATTATGGTGTTAGACAAATATAGCGATTTGCGTGAGGCCATCAACCGATATTTAGGGCCGATTATTGAGTATG ACCGGAAATATAATGGAAAGCTGCTTGAAACGCTCAAAGTGTATCTGCAGTGCAACGGTTCGAAGCAAGAGGCGGCAAAA CGGCTGTTTATCGTCCGGCAAACGTTGTATCACCGCATCGAGAAGCTGGAAAGCTTCCTTGGGGATAATTTCATGGAGGC GAACAAACGATTGGCTATTGAGCTGATGATCAAAGCGTATGACTACTTGATGGGTGATGGAGAGGCGCTATACGCGCAAA GAAATGCGCAACTTTAG
Upstream 100 bases:
>100_bases CTATTGGACAATTTGTCAATAGACGTTATCTTATTAGCAGGATTTTGGTTGTAAAGTTCCGAATATTTTTGACAGTAGTC AAGCAAAGGGGGAGGAAAGG
Downstream 100 bases:
>100_bases TGAATGGAAACGGAAAGCCTGTTTGCGGGAGCAGCTAGGAAGCCCGCTTCCATGGGGAAGAGCGCAACAGGGGAATGGAT GGCGGTTTAGATAGAACAAG
Product: putative regulatory protein
Products: NA
Alternate protein names: Transcriptional Regulator PucR Family; Transcriptional Regulator CdaR; Regulatory Protein; PucR Family Transcriptional Regulator; CdaR Family Transcriptional Regulator; Purine Catabolism PurC Domain-Containing Protein; Regulator Of Polyketide Synthase Expression; PucR-Like Transcriptional Regulator; Purine Catabolism Regulatory Protein-Like Family Protein; Purine Catabolism PurC-Like Protein; Purine Catabolism Regulatory Protein; Transcriptional Activator; Transcriptional Regulatory Protein; Sugar Diacid Utilization Regulator; Transcriptional Regulator CdaR Family; PucR Family Protein Transcriptional Regulator; Fis Family Transcriptional Regulator
Number of amino acids: Translated: 538; Mature: 537
Protein sequence:
>538_residues MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECD ASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYRE ILTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYF KLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYR AALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL
Sequences:
>Translated_538_residues MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECD ASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYRE ILTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYF KLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYR AALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL >Mature_537_residues GYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECDA SGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREI LTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLIL DRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYFK LLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRA ALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAKR LFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL
Specific function: Unknown
COG id: COG2508
COG function: function code TQ; Regulator of polyketide synthase expression
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61441; Mature: 61309
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGV CCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCC GWREDDSLFLSLLRQLIECDASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFV CCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHHHHHCCCCCEEEEEECCCCEE EITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREILTFLHSCLGHQVVFHMHGG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEE LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGV ECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE VWVCKVGTAGQKGNFDSTYFKLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHH IEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRAALEALKIRSRLDEQGASLF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC >Mature Secondary Structure GYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGV CCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCC GWREDDSLFLSLLRQLIECDASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFV CCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHHHHHCCCCCEEEEEECCCCEE EITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREILTFLHSCLGHQVVFHMHGG EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC DVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEE LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGV ECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE VWVCKVGTAGQKGNFDSTYFKLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSR EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHH IEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRAALEALKIRSRLDEQGASLF HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH YDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA