Definition Geobacillus thermodenitrificans NG80-2 chromosome, complete genome.
Accession NC_009328
Length 3,550,319

Click here to switch to the map view.

The map label for this gene is 138894947

Identifier: 138894947

GI number: 138894947

Start: 1363245

End: 1364861

Strand: Direct

Name: 138894947

Synonym: GTNG_1285

Alternate gene names: NA

Gene position: 1363245-1364861 (Clockwise)

Preceding gene: 138894944

Following gene: 138894948

Centisome position: 38.4

GC content: 48.67

Gene sequence:

>1617_bases
ATGGGGTACGGCTTTCCTCTGACAGTCGCCGATGTTTTACAGAGGAAGTATTTCCAAAAGGCGGTCGTTATTGCTGGAAA
AGAAGGACTGTCAAGGACGGTCAAATGGGTGCATGTTGTTGAGGTCACGAAAATCAGCAATTTGTTGCGCGGCAAAGAGC
TCATTTTGTCTACCGGTGTCGGGTGGCGGGAAGATGACTCATTGTTTTTATCGCTGCTTCGGCAGCTGATCGAATGTGAT
GCTTCCGGGCTATGCATCGAATTGGGAACGTATGCCTCCTCCATTCCAAAGGAGGCACTGGAACTGGCTAACCGTCATCA
TTTCCCGCTCATTCTTTTTCTTGAGGAAGTTCCTTTCGTCGAGATTACTCACGATATTCACACGTATTTAATTAATCAGC
AGTATCAAATGATCGCTCAGCTCGAGTCGTATTCTCAAGAGTTGAACAAAAAGCTGTTGACGGTTCATCATTATCGGGAG
ATTTTAACATTTTTGCACAGCTGCCTAGGCCATCAGGTTGTTTTCCACATGCACGGCGGGGATGTGGAATACATACCGAG
CCGGCCAAGGGGGAATTTGGGGGCAGGTGTTGGGCTTGGAGGAGAAAGCGACTGGCCATCAGCTGCGGTCGTCAAGCCGA
TTTCGTTATTTGGTGCTGAATACGCGGAGTTGGCCCTTCTTCCTGTCGGACGGGACATCAACGAGTTTGATTTGCTCATT
TTGGATCGCACCGCAACAGCGCTGGCCCAGCACTTGTTGCGGAACCTTTACGTCGAGGAGAGGCGGCGCACCGAAGAAAA
TGAGTGGCTAAAGGGCTGGATTGAAGGAGAGTACTCCGATCAAGAGATTTCTTCCTATTTATTAGACCATCATCCTTCCC
TTCATAGCCGCGGGGGAGTGGTATGGGTTTGTAAAGTGGGGACGGCGGGTCAAAAAGGAAACTTTGATTCAACATATTTT
AAGCTGTTATGCCGTTCGCTGTTTGAGCAACGCGGGTTTCTCTTATTTTCGGTAGAGATGGGACGCCACCTTGCGTTTAT
TGCCATCAATCTTCGGGATGAGGAGACGTGGAAGAGCCGGATCGAGGAAGGAATCAAATGTCTCATGGCATCGGACTTTA
TGCAAACACGACTTTCCGCCTTGCCGGTCGGCGTCGGAACGTTTGTCCCATCTCTTTCTTCCATCAATCAAAGCTACCGC
GCTGCGCTAGAGGCGCTGAAAATTCGCAGTCGGTTGGACGAACAGGGAGCTAGCCTGTTTTACGATGATTTGCATTTATA
CCGGATGATTATGGTGTTAGACAAATATAGCGATTTGCGTGAGGCCATCAACCGATATTTAGGGCCGATTATTGAGTATG
ACCGGAAATATAATGGAAAGCTGCTTGAAACGCTCAAAGTGTATCTGCAGTGCAACGGTTCGAAGCAAGAGGCGGCAAAA
CGGCTGTTTATCGTCCGGCAAACGTTGTATCACCGCATCGAGAAGCTGGAAAGCTTCCTTGGGGATAATTTCATGGAGGC
GAACAAACGATTGGCTATTGAGCTGATGATCAAAGCGTATGACTACTTGATGGGTGATGGAGAGGCGCTATACGCGCAAA
GAAATGCGCAACTTTAG

Upstream 100 bases:

>100_bases
CTATTGGACAATTTGTCAATAGACGTTATCTTATTAGCAGGATTTTGGTTGTAAAGTTCCGAATATTTTTGACAGTAGTC
AAGCAAAGGGGGAGGAAAGG

Downstream 100 bases:

>100_bases
TGAATGGAAACGGAAAGCCTGTTTGCGGGAGCAGCTAGGAAGCCCGCTTCCATGGGGAAGAGCGCAACAGGGGAATGGAT
GGCGGTTTAGATAGAACAAG

Product: putative regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator PucR Family; Transcriptional Regulator CdaR; Regulatory Protein; PucR Family Transcriptional Regulator; CdaR Family Transcriptional Regulator; Purine Catabolism PurC Domain-Containing Protein; Regulator Of Polyketide Synthase Expression; PucR-Like Transcriptional Regulator; Purine Catabolism Regulatory Protein-Like Family Protein; Purine Catabolism PurC-Like Protein; Purine Catabolism Regulatory Protein; Transcriptional Activator; Transcriptional Regulatory Protein; Sugar Diacid Utilization Regulator; Transcriptional Regulator CdaR Family; PucR Family Protein Transcriptional Regulator; Fis Family Transcriptional Regulator

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECD
ASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYRE
ILTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI
LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYF
KLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYR
AALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK
RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL

Sequences:

>Translated_538_residues
MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECD
ASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYRE
ILTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI
LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYF
KLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYR
AALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK
RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL
>Mature_537_residues
GYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGVGWREDDSLFLSLLRQLIECDA
SGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFVEITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREI
LTFLHSCLGHQVVFHMHGGDVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLIL
DRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGVVWVCKVGTAGQKGNFDSTYFK
LLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSRIEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRA
ALEALKIRSRLDEQGASLFYDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAKR
LFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL

Specific function: Unknown

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61441; Mature: 61309

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGV
CCCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCC
GWREDDSLFLSLLRQLIECDASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFV
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHHHHHCCCCCEEEEEECCCCEE
EITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREILTFLHSCLGHQVVFHMHGG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
DVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI
CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEE
LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGV
ECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE
VWVCKVGTAGQKGNFDSTYFKLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHH
IEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRAALEALKIRSRLDEQGASLF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC
>Mature Secondary Structure 
GYGFPLTVADVLQRKYFQKAVVIAGKEGLSRTVKWVHVVEVTKISNLLRGKELILSTGV
CCCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHEEECCC
GWREDDSLFLSLLRQLIECDASGLCIELGTYASSIPKEALELANRHHFPLILFLEEVPFV
CCCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHCCHHHHHHHCCCCCEEEEEECCCCEE
EITHDIHTYLINQQYQMIAQLESYSQELNKKLLTVHHYREILTFLHSCLGHQVVFHMHGG
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC
DVEYIPSRPRGNLGAGVGLGGESDWPSAAVVKPISLFGAEYAELALLPVGRDINEFDLLI
CEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHEEEEECCCCCCCEEEEE
LDRTATALAQHLLRNLYVEERRRTEENEWLKGWIEGEYSDQEISSYLLDHHPSLHSRGGV
ECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCE
VWVCKVGTAGQKGNFDSTYFKLLCRSLFEQRGFLLFSVEMGRHLAFIAINLRDEETWKSR
EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEEEEEECCCHHHHHHH
IEEGIKCLMASDFMQTRLSALPVGVGTFVPSLSSINQSYRAALEALKIRSRLDEQGASLF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
YDDLHLYRMIMVLDKYSDLREAINRYLGPIIEYDRKYNGKLLETLKVYLQCNGSKQEAAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHH
RLFIVRQTLYHRIEKLESFLGDNFMEANKRLAIELMIKAYDYLMGDGEALYAQRNAQL
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA