| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is spo0M [H]
Identifier: 138894878
GI number: 138894878
Start: 1282346
End: 1282732
Strand: Direct
Name: spo0M [H]
Synonym: GTNG_1214
Alternate gene names: 138894878
Gene position: 1282346-1282732 (Clockwise)
Preceding gene: 138894874
Following gene: 138894879
Centisome position: 36.12
GC content: 52.45
Gene sequence:
>387_bases ATGATGTCAAAGGTCGGGGTCGGGTCGGCGCGTGTCGACTTGATTTTAAATAAATCGTTATGGCGACAGGGTGAAACGAT TCAAGGGGTCGTTCATATTTATGGTGGAACGGTCGAGCAGACGATCGAGCGGCTCGATGTTGAGCTTGTACAAAAAACGA TTGAAAACGGCAAGGAGCGCGATGCGGTCGTAGCTGTCATCCCGGCGGCTGGAGCGTTTGCGATCAAGCCGGGGGAGAAA AAGGAAATCCCGTTTGCTTACACGATCCCAGAGACGTTGCCGATGTCGCGTCCAGGCCGATCATACCGGTTCATCACCCG CCTCGATATCGAGGATGCGGTCGATACGCTCGACTTCGACTACGTGCAAATTTTACCGAAAAAATAG
Upstream 100 bases:
>100_bases ATTTTTTGGCTTTGGTTGAAACGGGCGGCGGCTGTTTTTCGTATATTGGAATGACAAGAGTGACAGACTAAAGAGGTGAC AATTAGTGTTGCTGCGTAAA
Downstream 100 bases:
>100_bases GTTGACAACGCTTACAAACTTGCGCTATCCTAAAGACAAGTTAATCATTTTGTGGCGGAGAAACGGAGACCCACACATGT TTCCTTTGAATAGGGGAAGT
Product: sporulation control protein
Products: NA
Alternate protein names: Stage 0 sporulation protein M [H]
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MMSKVGVGSARVDLILNKSLWRQGETIQGVVHIYGGTVEQTIERLDVELVQKTIENGKERDAVVAVIPAAGAFAIKPGEK KEIPFAYTIPETLPMSRPGRSYRFITRLDIEDAVDTLDFDYVQILPKK
Sequences:
>Translated_128_residues MMSKVGVGSARVDLILNKSLWRQGETIQGVVHIYGGTVEQTIERLDVELVQKTIENGKERDAVVAVIPAAGAFAIKPGEK KEIPFAYTIPETLPMSRPGRSYRFITRLDIEDAVDTLDFDYVQILPKK >Mature_128_residues MMSKVGVGSARVDLILNKSLWRQGETIQGVVHIYGGTVEQTIERLDVELVQKTIENGKERDAVVAVIPAAGAFAIKPGEK KEIPFAYTIPETLPMSRPGRSYRFITRLDIEDAVDTLDFDYVQILPKK
Specific function: Controls the expression of spo0A and is required to pass the morphological stage 0 of sporulation [H]
COG id: COG4326
COG function: function code R; Sporulation control protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the spo0M family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014756 - InterPro: IPR009776 [H]
Pfam domain/function: PF07070 Spo0M [H]
EC number: NA
Molecular weight: Translated: 14260; Mature: 14260
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSKVGVGSARVDLILNKSLWRQGETIQGVVHIYGGTVEQTIERLDVELVQKTIENGKER CCCCCCCCCEEEEEEECHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC DAVVAVIPAAGAFAIKPGEKKEIPFAYTIPETLPMSRPGRSYRFITRLDIEDAVDTLDFD CEEEEEEECCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHCCCC YVQILPKK EEEEECCC >Mature Secondary Structure MMSKVGVGSARVDLILNKSLWRQGETIQGVVHIYGGTVEQTIERLDVELVQKTIENGKER CCCCCCCCCEEEEEEECHHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCC DAVVAVIPAAGAFAIKPGEKKEIPFAYTIPETLPMSRPGRSYRFITRLDIEDAVDTLDFD CEEEEEEECCCEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECHHHHHHHCCCC YVQILPKK EEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9795118; 9202460; 9384377 [H]