Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yufN [H]
Identifier: 138894803
GI number: 138894803
Start: 1201170
End: 1202264
Strand: Direct
Name: yufN [H]
Synonym: GTNG_1137
Alternate gene names: 138894803
Gene position: 1201170-1202264 (Clockwise)
Preceding gene: 138894802
Following gene: 138894804
Centisome position: 33.83
GC content: 49.95
Gene sequence:
>1095_bases ATGGTGAAAAAGCGATTCGGATGGGCGCTCTCCGTTCTGTTCGCTGCCGGTACGCTGCTTTCTGCCTGTGGCGGCCAAGG AGGAGACAATGCGGGAGGCAAGAAAGAAGATACGTTCAGCGTTGCCATGGTCACGGACGTAGGTGGCGTTGACGACAGAT CGTTCAACCAGTCGGCTTGGGAAGGATTGCAAAAGTTCGGTAAAGATAACGGCCTTGAGAAAGGGCGCGGCGGTTATGAC TATTTGCAATCCACGAGCGATGCCGATTATCCGACAAACTTAAACAAGCTCGTGCGCAACGACTTTGACTTGATTTACGG TATCGGTTATTTGATGGGCGATGCGATGAAAGAAGTGGCCGAGCAAAATCCGAAAAAGCATTTTGCCATTGTTGATACGG TCGTTGATGCACCGAATGTCGCAAGCATTACGTTTAAAGAGCACGAAGGCTCGTTCCTTGTCGGTGTTGTCGCCGGATTG ATGACGAAAACAAATAAAGTCGGCTTTGTCGGCGGGATGGAAATTCCGTTGATTGAGAAATTCGAAAGCGGATTCCGGGC CGGCGTCAAAGCGGTCAATCCGAAAGCGACTGTCGAAGTGCAATATGCTGGAGCGTTTGACCAAGCGGATAAAGGGAAGG CGATCGCCTCAAGCATGTACGCTTCCGGTATTGATATTATTTACCATGCAGCCGGAGGAACTGGAAACGGCGTTTTCTCG GAAGCAAAAGACTTAAAGAAAAAAGATCCGAACCGTGAAATTTGGGTCATCGGCGTCGATAAAGACCAAGCTCCGGAAGG CGAGGTTAAGATCGGCGACAAAACATACAATGTGACGCTCACGTCGATGGTTAAACGGGTCGATGTAGCTGTTTATGACG TTGCCAAACGGGCGCAAGCCGGCGACTTCCCAGGCGGTCAAGCGATTGAGTACGGCTTGCCGGAAAACGGAGTCGGTATT GCCCCGACGCAAGACAACATTCCGGATGATGTGCTAAAAGCGGTTGATGAATGGAAAGAAAAAATCGCTAACGGTGAAGT GAAAGTGCCGACGAACCGAAAAGAGTACGAACAATTTGCTGCAACGTTGAAATAA
Upstream 100 bases:
>100_bases AGGAAGCGATTCGGGTTTTAAAGGGGGTGAAATCGGTACATAGAAAGAGAGCGGAAGTTTCATACTAATTTAGGAACAAA TTTTTAATAGGGGGTAATGG
Downstream 100 bases:
>100_bases TGAAATGAAAAAGGCTAGTGCGCGCCGCTAGCCTTTTTCAAAATCATGAAATGAAGGGCGGTCTATATAGATGCCATTTG GTGCTTTACCATTCGCCGTT
Product: CD4+ T cell-stimulating antigen, lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 364; Mature: 364
Protein sequence:
>364_residues MVKKRFGWALSVLFAAGTLLSACGGQGGDNAGGKKEDTFSVAMVTDVGGVDDRSFNQSAWEGLQKFGKDNGLEKGRGGYD YLQSTSDADYPTNLNKLVRNDFDLIYGIGYLMGDAMKEVAEQNPKKHFAIVDTVVDAPNVASITFKEHEGSFLVGVVAGL MTKTNKVGFVGGMEIPLIEKFESGFRAGVKAVNPKATVEVQYAGAFDQADKGKAIASSMYASGIDIIYHAAGGTGNGVFS EAKDLKKKDPNREIWVIGVDKDQAPEGEVKIGDKTYNVTLTSMVKRVDVAVYDVAKRAQAGDFPGGQAIEYGLPENGVGI APTQDNIPDDVLKAVDEWKEKIANGEVKVPTNRKEYEQFAATLK
Sequences:
>Translated_364_residues MVKKRFGWALSVLFAAGTLLSACGGQGGDNAGGKKEDTFSVAMVTDVGGVDDRSFNQSAWEGLQKFGKDNGLEKGRGGYD YLQSTSDADYPTNLNKLVRNDFDLIYGIGYLMGDAMKEVAEQNPKKHFAIVDTVVDAPNVASITFKEHEGSFLVGVVAGL MTKTNKVGFVGGMEIPLIEKFESGFRAGVKAVNPKATVEVQYAGAFDQADKGKAIASSMYASGIDIIYHAAGGTGNGVFS EAKDLKKKDPNREIWVIGVDKDQAPEGEVKIGDKTYNVTLTSMVKRVDVAVYDVAKRAQAGDFPGGQAIEYGLPENGVGI APTQDNIPDDVLKAVDEWKEKIANGEVKVPTNRKEYEQFAATLK >Mature_364_residues MVKKRFGWALSVLFAAGTLLSACGGQGGDNAGGKKEDTFSVAMVTDVGGVDDRSFNQSAWEGLQKFGKDNGLEKGRGGYD YLQSTSDADYPTNLNKLVRNDFDLIYGIGYLMGDAMKEVAEQNPKKHFAIVDTVVDAPNVASITFKEHEGSFLVGVVAGL MTKTNKVGFVGGMEIPLIEKFESGFRAGVKAVNPKATVEVQYAGAFDQADKGKAIASSMYASGIDIIYHAAGGTGNGVFS EAKDLKKKDPNREIWVIGVDKDQAPEGEVKIGDKTYNVTLTSMVKRVDVAVYDVAKRAQAGDFPGGQAIEYGLPENGVGI APTQDNIPDDVLKAVDEWKEKIANGEVKVPTNRKEYEQFAATLK
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BMP lipoprotein family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003760 [H]
Pfam domain/function: PF02608 Bmp [H]
EC number: NA
Molecular weight: Translated: 39032; Mature: 39032
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKKRFGWALSVLFAAGTLLSACGGQGGDNAGGKKEDTFSVAMVTDVGGVDDRSFNQSAW CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EGLQKFGKDNGLEKGRGGYDYLQSTSDADYPTNLNKLVRNDFDLIYGIGYLMGDAMKEVA HHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH EQNPKKHFAIVDTVVDAPNVASITFKEHEGSFLVGVVAGLMTKTNKVGFVGGMEIPLIEK HCCCCCEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHH FESGFRAGVKAVNPKATVEVQYAGAFDQADKGKAIASSMYASGIDIIYHAAGGTGNGVFS HHHHHHHCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHH EAKDLKKKDPNREIWVIGVDKDQAPEGEVKIGDKTYNVTLTSMVKRVDVAVYDVAKRAQA HHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCC GDFPGGQAIEYGLPENGVGIAPTQDNIPDDVLKAVDEWKEKIANGEVKVPTNRKEYEQFA CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHH ATLK HHCC >Mature Secondary Structure MVKKRFGWALSVLFAAGTLLSACGGQGGDNAGGKKEDTFSVAMVTDVGGVDDRSFNQSAW CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHH EGLQKFGKDNGLEKGRGGYDYLQSTSDADYPTNLNKLVRNDFDLIYGIGYLMGDAMKEVA HHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH EQNPKKHFAIVDTVVDAPNVASITFKEHEGSFLVGVVAGLMTKTNKVGFVGGMEIPLIEK HCCCCCEEEEEHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHH FESGFRAGVKAVNPKATVEVQYAGAFDQADKGKAIASSMYASGIDIIYHAAGGTGNGVFS HHHHHHHCCEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCHH EAKDLKKKDPNREIWVIGVDKDQAPEGEVKIGDKTYNVTLTSMVKRVDVAVYDVAKRAQA HHHHHHHCCCCCEEEEEECCCCCCCCCCEEECCEEEEEEHHHHHHHHHHHHHHHHHHHCC GDFPGGQAIEYGLPENGVGIAPTQDNIPDDVLKAVDEWKEKIANGEVKVPTNRKEYEQFA CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHH ATLK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]