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The map label for this gene is ylbK [H]

Identifier: 138894636

GI number: 138894636

Start: 1032241

End: 1033059

Strand: Direct

Name: ylbK [H]

Synonym: GTNG_0966

Alternate gene names: 138894636

Gene position: 1032241-1033059 (Clockwise)

Preceding gene: 138894634

Following gene: 138894637

Centisome position: 29.07

GC content: 57.51

Gene sequence:

>819_bases
ATGAAAGCGGGGAACACCGCAGCGAAGGAGGGAAGGATTGTGCCGCCGAAAGTCGGATTGGCGCTTGGCTCGGGAGGAGC
GCGCGGGTTTGCCCATCTTGGTGTATTGAAAGTATTGGAGCAGGAAGACATTCCGGTGTCCTACTTAGCCGGCAGCAGCA
TCGGTGCGCTGGTTGCTGTCCTTTATGCGAGCGGCCACGGCCTCAACCGGCTTTATCGGCTCGCTAAATCGTTTCGGCGC
AACGATTTTCTTGATTGGACAGTACCGAAAATGGGATTAATTGCCGGCGAACGTATCACTGAGTTCATCCGTTTGTTGAC
GAAAGGGAAGCGAATCGAGGATCTTTCTCCACCGGTGGCGGTTGTCGCCGCCGATTTGCAGACGGGGGAAAAAGTCGTCT
TTCGACAAGGGGAAGCGGCACAGGCGGTGCGGGCAAGCATTTCGATTCCCGGCATTTTTGTGCCGGCTGAGATGGACGGG
AGACTGCTTGTCGACGGTGGTGTCGTCGACCGGGTGCCGGTGTCGGTCGCCCGGGCGATGGGGGCGGATATTGTCATCGC
CGTCGATGTCGCCCCGCTTAACACGAAAGCGGAAATTACATCGATTGTTGATGTCATCTGGCAGAGCCTCGACGTTTTGC
AAGCCGAGCTCGTCACCTACCGCCAGCTTGCCTCAGACGTGATGATCCGGCCGCGCGTTGAGCGGTACAGCTCGCGGGCA
TTTACACATATTGAGGAAATTATCGCCCACGGTGAGGAAGAAGCGCGGAGACAGATCGGAGCGATCCGCCAAGCGATCGA
ACAGTGGAAGGAGCCATAG

Upstream 100 bases:

>100_bases
CGTTTCAACGTTCTCCCCCCTTTTCTCGCTGTTCGGCTTTTTGCGGTACAACCTCATATAACCTAATATACGAGCATAGG
GGGACATTTTAGACCATAAG

Downstream 100 bases:

>100_bases
CACGAATGAAAAAACGGACGTATATCGCAGCGTTTTTCTTTGGCGCTGTCCTCGCTTTTTTGCTCTTTTTTGTGAAACTG
CCATATTATGTGATGATGCC

Product: phospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKAGNTAAKEGRIVPPKVGLALGSGGARGFAHLGVLKVLEQEDIPVSYLAGSSIGALVAVLYASGHGLNRLYRLAKSFRR
NDFLDWTVPKMGLIAGERITEFIRLLTKGKRIEDLSPPVAVVAADLQTGEKVVFRQGEAAQAVRASISIPGIFVPAEMDG
RLLVDGGVVDRVPVSVARAMGADIVIAVDVAPLNTKAEITSIVDVIWQSLDVLQAELVTYRQLASDVMIRPRVERYSSRA
FTHIEEIIAHGEEEARRQIGAIRQAIEQWKEP

Sequences:

>Translated_272_residues
MKAGNTAAKEGRIVPPKVGLALGSGGARGFAHLGVLKVLEQEDIPVSYLAGSSIGALVAVLYASGHGLNRLYRLAKSFRR
NDFLDWTVPKMGLIAGERITEFIRLLTKGKRIEDLSPPVAVVAADLQTGEKVVFRQGEAAQAVRASISIPGIFVPAEMDG
RLLVDGGVVDRVPVSVARAMGADIVIAVDVAPLNTKAEITSIVDVIWQSLDVLQAELVTYRQLASDVMIRPRVERYSSRA
FTHIEEIIAHGEEEARRQIGAIRQAIEQWKEP
>Mature_272_residues
MKAGNTAAKEGRIVPPKVGLALGSGGARGFAHLGVLKVLEQEDIPVSYLAGSSIGALVAVLYASGHGLNRLYRLAKSFRR
NDFLDWTVPKMGLIAGERITEFIRLLTKGKRIEDLSPPVAVVAADLQTGEKVVFRQGEAAQAVRASISIPGIFVPAEMDG
RLLVDGGVVDRVPVSVARAMGADIVIAVDVAPLNTKAEITSIVDVIWQSLDVLQAELVTYRQLASDVMIRPRVERYSSRA
FTHIEEIIAHGEEEARRQIGAIRQAIEQWKEP

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

Organism=Homo sapiens, GI260656039, Length=207, Percent_Identity=34.2995169082126, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI260656041, Length=207, Percent_Identity=34.2995169082126, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI116256487, Length=207, Percent_Identity=34.2995169082126, Blast_Score=118, Evalue=7e-27,
Organism=Homo sapiens, GI260656043, Length=207, Percent_Identity=34.2995169082126, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI260656037, Length=207, Percent_Identity=34.2995169082126, Blast_Score=117, Evalue=9e-27,
Organism=Homo sapiens, GI148727335, Length=274, Percent_Identity=31.7518248175182, Blast_Score=116, Evalue=3e-26,
Organism=Homo sapiens, GI148727290, Length=274, Percent_Identity=31.7518248175182, Blast_Score=115, Evalue=3e-26,
Organism=Escherichia coli, GI226510936, Length=177, Percent_Identity=44.0677966101695, Blast_Score=136, Evalue=1e-33,
Organism=Caenorhabditis elegans, GI71997299, Length=186, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71997289, Length=186, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193204778, Length=165, Percent_Identity=31.5151515151515, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323581, Length=271, Percent_Identity=29.8892988929889, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281376913, Length=265, Percent_Identity=30.5660377358491, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28571388, Length=265, Percent_Identity=30.188679245283, Blast_Score=85, Evalue=6e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 29436; Mature: 29436

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAGNTAAKEGRIVPPKVGLALGSGGARGFAHLGVLKVLEQEDIPVSYLAGSSIGALVAV
CCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
LYASGHGLNRLYRLAKSFRRNDFLDWTVPKMGLIAGERITEFIRLLTKGKRIEDLSPPVA
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VVAADLQTGEKVVFRQGEAAQAVRASISIPGIFVPAEMDGRLLVDGGVVDRVPVSVARAM
EEEECCCCCCHHEEECCCHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHC
GADIVIAVDVAPLNTKAEITSIVDVIWQSLDVLQAELVTYRQLASDVMIRPRVERYSSRA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FTHIEEIIAHGEEEARRQIGAIRQAIEQWKEP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKAGNTAAKEGRIVPPKVGLALGSGGARGFAHLGVLKVLEQEDIPVSYLAGSSIGALVAV
CCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH
LYASGHGLNRLYRLAKSFRRNDFLDWTVPKMGLIAGERITEFIRLLTKGKRIEDLSPPVA
HHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCE
VVAADLQTGEKVVFRQGEAAQAVRASISIPGIFVPAEMDGRLLVDGGVVDRVPVSVARAM
EEEECCCCCCHHEEECCCHHHHHHHHCCCCCEEEECCCCCEEEECCCCCHHHHHHHHHHC
GADIVIAVDVAPLNTKAEITSIVDVIWQSLDVLQAELVTYRQLASDVMIRPRVERYSSRA
CCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
FTHIEEIIAHGEEEARRQIGAIRQAIEQWKEP
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]