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The map label for this gene is mcpC [H]

Identifier: 138894554

GI number: 138894554

Start: 957031

End: 959007

Strand: Direct

Name: mcpC [H]

Synonym: GTNG_0884

Alternate gene names: 138894554

Gene position: 957031-959007 (Clockwise)

Preceding gene: 138894550

Following gene: 138894555

Centisome position: 26.96

GC content: 50.18

Gene sequence:

>1977_bases
GTGTTTCGAACATTACGCAGCAAGTTAATTGTTTTGATGGCGCTATTATTGATTCTTTCGTTGGCGGCCACGCAGTTCGT
CGGCATGATGCAAATGAGGAAACTCGTTGACGCTGATGTCAAGCAACGAGCACAGTCGGCACTCGACGGGTTGCTCGGCG
ATATTCGTACGAGCTTTCAAAGCGAGGAGAACAGCTTAGTACAGTTTAGTGAATCGCCGTCAGCTATGCAAATGATTCAA
GATGAAAAAGCATGGTTGCAGCTTGAAAAGCAGTTCCGTACGTTTTTGCGCATTCATAAAAATGTGCAGTACATCTATAT
CGGCACGGAGCAGAAGAAAATGTACATTACGCCGACGGCGGAGTTTCCGGACGGATACGATCCGACAAGCCGCCCGTGGT
ATAAAGAAGCGATGGAACGCCCGGACCAAGTCGTGTGGACAGAGCCGTACGTCGATGCCATTACAGGTAAACATGTCGTG
ACATTGGCTAAGGCAGTGAGTGAAAATGGCCGCGTTTCTGCTGTCATCGGTATTGATATGTCGCTCGATACGGTGACGAG
AATGGTCAACGCGAGCGATGTCGGTTATCACGGCTACCCGGTGTTGTTTGATTCAAAAGGAATGGCGATCGTCCATCCAG
AGCATAAAGGGAAAAATATGGCGAAAAACGCGACTGTTCGCTATATGCTTGAACGTGAAAAAGGAATGTGGCAATACGAG
GAAGATGGCGAACAACGGGTCATATATTTCACAACGATTCCAGAGCTTGGATGGAAAGTCGGCGCTGTTTATAAGAAAGC
GGACTTATCAGCGATGAGCCGTTCAGTTGGGATGAACATGCTCGTCATTACAGTGATCGCGCTGATTGTAGCATTTGTCG
CTGTTTACTTTTTAGCGCGTTCGATTACGAAACCGATTGTCGTCTTGCAAGAGCAGGTCGAAAAGGCGGCGTCTGGTGAT
TTGACGGTGCAGGCGCGTGTGACAGCAAAAGATGAGATTGGTCGCCTCGCTCGCCATTTCAACGACATGATCGAGCATAT
GCGCGTGCTGATCGGTGAAGTGAACCGATCGGTAAATGAATTAGCGGCTTCAGCTGACCATTTAAGCGCCGTCTCCGAAG
AAACGATGGCAACGAGCGAACAAGTGGCGAAAGCGATCGGTGAGATTGCGAAAGGGACGACCGATCAAGCTGGAAGCCTT
GATACGATCAATGAGCAGACGTCAGCGTTGTCACAGCAAATTGAATCGGTCACAAGTGCGACAGTTGGCATGGAATCATT
GTCGGATGACACGAAAACGGCCAGTTATGATGGGTTGGAGCATTTAAATATCTTGCAGCTGAAATCGGAGGAAGCGAAAC
AAGAGCTGTCCGCAGTAGAAAACGTCATTAACGATCTAGTGAAAAAAATGGATGAAATTGATGGGGTTATCCAAACAATT
ACCGCCATTTCCGGACAGACGAACTTGCTTGCGTTAAACGCCAGCATTGAGGCGGCGCGCGCCGGCGAGCATGGCAAAGG
ATTTGCCGTTGTCGCTGACGAGGTGCGCAAACTGGCGGAACAATCAGCAAAAGCGACAGAAATGATCCATGCGACCATTG
CGGCCATTCAGCAGCAAGCGGCATTGGCGATCGAGGCCGTCGGCCGTTCCAAACAGGCGTACAACAAACAGCGGGAAGCG
GTGCATACGACCGGTGATTTGTTCGTAAAAATCACTAGCATGATGGAACAATTGACAGACGCGCTCGCTGCTGTGATGGA
AGAAGCAAAGCGGATGAACAGAAGCAAAGATGACGTGGTCGGCGCGATGCAAAACATTGCCGCCATCGCCCAACAGTCAG
CGGCAGCGGCAGAAGAAGTGGCTGCTTCGGCCGATGACCAGTTGCAGGCGCTGGCGACGGTGACCGAATCGGCAGGATCG
TTAAACGAGATGAGCCAGCAATTGAAGCAGCTCGTGGAAAAATTCAAGCTCTCGTAA

Upstream 100 bases:

>100_bases
GCTAATCCTATGGACGGAGGACTATCGTCCTTTTATAATGGAATGTAGTTCAATAAAATGTAGTTCGATGAAACCAGGGG
ACAGAGGGGAGAAGTAGGGA

Downstream 100 bases:

>100_bases
GAAAGCGCAGCTTTTGTTCGGCTGCGCTTTTCCATTGGTGCCGACGGGCTGTAGCTGGTAGTTGGACCGCCTCTCAAGCA
GCAGGAGGCGGCGTTGCCTG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MFRTLRSKLIVLMALLLILSLAATQFVGMMQMRKLVDADVKQRAQSALDGLLGDIRTSFQSEENSLVQFSESPSAMQMIQ
DEKAWLQLEKQFRTFLRIHKNVQYIYIGTEQKKMYITPTAEFPDGYDPTSRPWYKEAMERPDQVVWTEPYVDAITGKHVV
TLAKAVSENGRVSAVIGIDMSLDTVTRMVNASDVGYHGYPVLFDSKGMAIVHPEHKGKNMAKNATVRYMLEREKGMWQYE
EDGEQRVIYFTTIPELGWKVGAVYKKADLSAMSRSVGMNMLVITVIALIVAFVAVYFLARSITKPIVVLQEQVEKAASGD
LTVQARVTAKDEIGRLARHFNDMIEHMRVLIGEVNRSVNELAASADHLSAVSEETMATSEQVAKAIGEIAKGTTDQAGSL
DTINEQTSALSQQIESVTSATVGMESLSDDTKTASYDGLEHLNILQLKSEEAKQELSAVENVINDLVKKMDEIDGVIQTI
TAISGQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAEQSAKATEMIHATIAAIQQQAALAIEAVGRSKQAYNKQREA
VHTTGDLFVKITSMMEQLTDALAAVMEEAKRMNRSKDDVVGAMQNIAAIAQQSAAAAEEVAASADDQLQALATVTESAGS
LNEMSQQLKQLVEKFKLS

Sequences:

>Translated_658_residues
MFRTLRSKLIVLMALLLILSLAATQFVGMMQMRKLVDADVKQRAQSALDGLLGDIRTSFQSEENSLVQFSESPSAMQMIQ
DEKAWLQLEKQFRTFLRIHKNVQYIYIGTEQKKMYITPTAEFPDGYDPTSRPWYKEAMERPDQVVWTEPYVDAITGKHVV
TLAKAVSENGRVSAVIGIDMSLDTVTRMVNASDVGYHGYPVLFDSKGMAIVHPEHKGKNMAKNATVRYMLEREKGMWQYE
EDGEQRVIYFTTIPELGWKVGAVYKKADLSAMSRSVGMNMLVITVIALIVAFVAVYFLARSITKPIVVLQEQVEKAASGD
LTVQARVTAKDEIGRLARHFNDMIEHMRVLIGEVNRSVNELAASADHLSAVSEETMATSEQVAKAIGEIAKGTTDQAGSL
DTINEQTSALSQQIESVTSATVGMESLSDDTKTASYDGLEHLNILQLKSEEAKQELSAVENVINDLVKKMDEIDGVIQTI
TAISGQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAEQSAKATEMIHATIAAIQQQAALAIEAVGRSKQAYNKQREA
VHTTGDLFVKITSMMEQLTDALAAVMEEAKRMNRSKDDVVGAMQNIAAIAQQSAAAAEEVAASADDQLQALATVTESAGS
LNEMSQQLKQLVEKFKLS
>Mature_658_residues
MFRTLRSKLIVLMALLLILSLAATQFVGMMQMRKLVDADVKQRAQSALDGLLGDIRTSFQSEENSLVQFSESPSAMQMIQ
DEKAWLQLEKQFRTFLRIHKNVQYIYIGTEQKKMYITPTAEFPDGYDPTSRPWYKEAMERPDQVVWTEPYVDAITGKHVV
TLAKAVSENGRVSAVIGIDMSLDTVTRMVNASDVGYHGYPVLFDSKGMAIVHPEHKGKNMAKNATVRYMLEREKGMWQYE
EDGEQRVIYFTTIPELGWKVGAVYKKADLSAMSRSVGMNMLVITVIALIVAFVAVYFLARSITKPIVVLQEQVEKAASGD
LTVQARVTAKDEIGRLARHFNDMIEHMRVLIGEVNRSVNELAASADHLSAVSEETMATSEQVAKAIGEIAKGTTDQAGSL
DTINEQTSALSQQIESVTSATVGMESLSDDTKTASYDGLEHLNILQLKSEEAKQELSAVENVINDLVKKMDEIDGVIQTI
TAISGQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAEQSAKATEMIHATIAAIQQQAALAIEAVGRSKQAYNKQREA
VHTTGDLFVKITSMMEQLTDALAAVMEEAKRMNRSKDDVVGAMQNIAAIAQQSAAAAEEVAASADDQLQALATVTESAGS
LNEMSQQLKQLVEKFKLS

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=385, Percent_Identity=27.2727272727273, Blast_Score=122, Evalue=6e-29,
Organism=Escherichia coli, GI2367378, Length=345, Percent_Identity=29.5652173913043, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI1788194, Length=351, Percent_Identity=27.0655270655271, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1788195, Length=323, Percent_Identity=27.8637770897833, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1789453, Length=332, Percent_Identity=28.6144578313253, Blast_Score=87, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 72183; Mature: 72183

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRTLRSKLIVLMALLLILSLAATQFVGMMQMRKLVDADVKQRAQSALDGLLGDIRTSFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEENSLVQFSESPSAMQMIQDEKAWLQLEKQFRTFLRIHKNVQYIYIGTEQKKMYITPTA
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC
EFPDGYDPTSRPWYKEAMERPDQVVWTEPYVDAITGKHVVTLAKAVSENGRVSAVIGIDM
CCCCCCCCCCCCHHHHHHCCCCCEEECCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEECC
SLDTVTRMVNASDVGYHGYPVLFDSKGMAIVHPEHKGKNMAKNATVRYMLEREKGMWQYE
CHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EDGEQRVIYFTTIPELGWKVGAVYKKADLSAMSRSVGMNMLVITVIALIVAFVAVYFLAR
CCCCCEEEEEEECCHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SITKPIVVLQEQVEKAASGDLTVQARVTAKDEIGRLARHFNDMIEHMRVLIGEVNRSVNE
HHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASADHLSAVSEETMATSEQVAKAIGEIAKGTTDQAGSLDTINEQTSALSQQIESVTSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVGMESLSDDTKTASYDGLEHLNILQLKSEEAKQELSAVENVINDLVKKMDEIDGVIQTI
HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAISGQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAEQSAKATEMIHATIAAIQQQA
HHHCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIEAVGRSKQAYNKQREAVHTTGDLFVKITSMMEQLTDALAAVMEEAKRMNRSKDDVV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GAMQNIAAIAQQSAAAAEEVAASADDQLQALATVTESAGSLNEMSQQLKQLVEKFKLS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFRTLRSKLIVLMALLLILSLAATQFVGMMQMRKLVDADVKQRAQSALDGLLGDIRTSFQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SEENSLVQFSESPSAMQMIQDEKAWLQLEKQFRTFLRIHKNVQYIYIGTEQKKMYITPTA
CCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECC
EFPDGYDPTSRPWYKEAMERPDQVVWTEPYVDAITGKHVVTLAKAVSENGRVSAVIGIDM
CCCCCCCCCCCCHHHHHHCCCCCEEECCCHHHHHCCHHHHHHHHHHCCCCCEEEEEEECC
SLDTVTRMVNASDVGYHGYPVLFDSKGMAIVHPEHKGKNMAKNATVRYMLEREKGMWQYE
CHHHHHHHHCCCCCCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCC
EDGEQRVIYFTTIPELGWKVGAVYKKADLSAMSRSVGMNMLVITVIALIVAFVAVYFLAR
CCCCCEEEEEEECCHHCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
SITKPIVVLQEQVEKAASGDLTVQARVTAKDEIGRLARHFNDMIEHMRVLIGEVNRSVNE
HHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAASADHLSAVSEETMATSEQVAKAIGEIAKGTTDQAGSLDTINEQTSALSQQIESVTSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TVGMESLSDDTKTASYDGLEHLNILQLKSEEAKQELSAVENVINDLVKKMDEIDGVIQTI
HHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAISGQTNLLALNASIEAARAGEHGKGFAVVADEVRKLAEQSAKATEMIHATIAAIQQQA
HHHCCCCEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALAIEAVGRSKQAYNKQREAVHTTGDLFVKITSMMEQLTDALAAVMEEAKRMNRSKDDVV
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
GAMQNIAAIAQQSAAAAEEVAASADDQLQALATVTESAGSLNEMSQQLKQLVEKFKLS
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9353924; 9384377 [H]