Click here to switch to the map view.

The map label for this gene is yjbI [H]

Identifier: 138894377

GI number: 138894377

Start: 785098

End: 785511

Strand: Reverse

Name: yjbI [H]

Synonym: GTNG_0705

Alternate gene names: 138894377

Gene position: 785511-785098 (Counterclockwise)

Preceding gene: 138894378

Following gene: 138894376

Centisome position: 22.13

GC content: 54.11

Gene sequence:

>414_bases
ATGGGAGAACAATGGCAGACCCTTTATGAGGCGATCGGCGGAGAGGAAACGATTACGAAACTTGTCGAAGCGTTTTACCG
ACGCGTAGCCGCACATCCGGACTTGCGCCCGATTTTTCCGGACGATTTCACGGAAATCGCCCGTAAGCAGAAACAGTTTT
TAACGCAATATTTGGGTGGGCCTCCGCTTTATACCGCCGAGCATGGCCACCCGATGATGCGGGCGCGTCATCTTCGGTTT
GAAATTACACCGAAACGGGCGGAAGCATGGCTTGCCTGTATGCGGGCGGCGATGGATGAAATCGGCTTGTCCGGGCCGGC
GCGCGAACAGTTTTATCACCGGCTTGTTCTCACCGCCCACCATATGGTCAATACCCCGGATCATTTGGACAGAAAGGAGC
ATTCCCTTGAATAA

Upstream 100 bases:

>100_bases
TCGCCGTGTTCAAGTCACTTTGTTTGAGATAAACGTCTGCTGTTGATAAAATAGCAATCAAACGACGACGAATGACTTTC
AAACAAAAGGAGCATCCGCA

Downstream 100 bases:

>100_bases
GAAGTTCGCTGGGAAAGCGGCGTCGTCTTATGCCCCTTCCCAGCCGCTAGGCAACACGAACAAACCGCTGGAGCTTTACT
TATTTATTGATCCTTTATGC

Product: hypothetical protein

Products: NA

Alternate protein names: Truncated Hb; trHbO; Hemoglobin-like protein yjbI; Truncated BHb [H]

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MGEQWQTLYEAIGGEETITKLVEAFYRRVAAHPDLRPIFPDDFTEIARKQKQFLTQYLGGPPLYTAEHGHPMMRARHLRF
EITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAHHMVNTPDHLDRKEHSLE

Sequences:

>Translated_137_residues
MGEQWQTLYEAIGGEETITKLVEAFYRRVAAHPDLRPIFPDDFTEIARKQKQFLTQYLGGPPLYTAEHGHPMMRARHLRF
EITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAHHMVNTPDHLDRKEHSLE
>Mature_136_residues
GEQWQTLYEAIGGEETITKLVEAFYRRVAAHPDLRPIFPDDFTEIARKQKQFLTQYLGGPPLYTAEHGHPMMRARHLRFE
ITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAHHMVNTPDHLDRKEHSLE

Specific function: Hemoglobin-like protein that exhibits a low peroxidase activity. Its very high oxygen affinity may rule out the possibility that it is involved in oxygen transport [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group II subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 15937; Mature: 15806

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEQWQTLYEAIGGEETITKLVEAFYRRVAAHPDLRPIFPDDFTEIARKQKQFLTQYLGG
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PPLYTAEHGHPMMRARHLRFEITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAH
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HMVNTPDHLDRKEHSLE
HHCCCCHHHCCHHCCCC
>Mature Secondary Structure 
GEQWQTLYEAIGGEETITKLVEAFYRRVAAHPDLRPIFPDDFTEIARKQKQFLTQYLGG
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PPLYTAEHGHPMMRARHLRFEITPKRAEAWLACMRAAMDEIGLSGPAREQFYHRLVLTAH
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
HMVNTPDHLDRKEHSLE
HHCCCCHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]