Click here to switch to the map view.

The map label for this gene is 138894351

Identifier: 138894351

GI number: 138894351

Start: 759510

End: 760082

Strand: Direct

Name: 138894351

Synonym: GTNG_0679

Alternate gene names: NA

Gene position: 759510-760082 (Clockwise)

Preceding gene: 138894350

Following gene: 138894352

Centisome position: 21.39

GC content: 38.92

Gene sequence:

>573_bases
TTGGCGCGGGAACGAAAAATTTCGCTGAATGAGCTGTTTGCCCAAACGAAACAACTTCTCCTTGAACACGGATATGAAGG
ATTTACGTTTGGCTTGCTGGCTGAACGGCTTGGAGTGGCGCGGAGTGCAATTTATAAATATTTTGAGAACAAAGAGGAAT
TGATTACTACATATATGGTAAATGAAATGGAAGAAGTGTTCATAAAATTAGAACATATACATGTGTATCCTACCTTTGAT
GAGCAATTTCGTTTTCTGCTCGATTTCATCTTATATCATAATGATCTTCATGAAATGATTTCGATTGGAAAACGAATTCC
AGAAAACCATCCAAAAGTGCAGGAAAATAAACAGCGTCTCGCCCAGTTTCACAAGAGAATGTATGAAGAGCTAGAACATT
TAATCAAACGGGGAAAACAGGAAGGGAAAATAAAGCCGCACCTTCCGAACCAAGTAATTCTTGGTTATATTTTTCAGTCA
GTCTCTGTTCCTCATTTTCCCGGCATCTCTCTTGCTGAATGGGTGGAAAGCATTAGGGAGATCATTATGTACGGGGTCAT
GAATAGAAATTGA

Upstream 100 bases:

>100_bases
GGTCCAAAAGGTGTCCCGATATAGTGTTCGGGGCACCTTTCTTTTCTTTCACCGATCGTCAAGGGTATAATGAAAAGAAA
AAAGAAAGGAGAGTGCTTGG

Downstream 100 bases:

>100_bases
CAGTTATGTCACTTTCCCATTATCATTAAGTTGTATTTAAAGTGACAAGTTTGTCACTTTTGTTGATCAAACGAAATGGA
GGATGAGTAATGAATCGATG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MARERKISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENKEELITTYMVNEMEEVFIKLEHIHVYPTFD
EQFRFLLDFILYHNDLHEMISIGKRIPENHPKVQENKQRLAQFHKRMYEELEHLIKRGKQEGKIKPHLPNQVILGYIFQS
VSVPHFPGISLAEWVESIREIIMYGVMNRN

Sequences:

>Translated_190_residues
MARERKISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENKEELITTYMVNEMEEVFIKLEHIHVYPTFD
EQFRFLLDFILYHNDLHEMISIGKRIPENHPKVQENKQRLAQFHKRMYEELEHLIKRGKQEGKIKPHLPNQVILGYIFQS
VSVPHFPGISLAEWVESIREIIMYGVMNRN
>Mature_189_residues
ARERKISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENKEELITTYMVNEMEEVFIKLEHIHVYPTFDE
QFRFLLDFILYHNDLHEMISIGKRIPENHPKVQENKQRLAQFHKRMYEELEHLIKRGKQEGKIKPHLPNQVILGYIFQSV
SVPHFPGISLAEWVESIREIIMYGVMNRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22650; Mature: 22518

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARERKISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENKEELITTYMV
CCCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
NEMEEVFIKLEHIHVYPTFDEQFRFLLDFILYHNDLHEMISIGKRIPENHPKVQENKQRL
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQFHKRMYEELEHLIKRGKQEGKIKPHLPNQVILGYIFQSVSVPHFPGISLAEWVESIRE
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IIMYGVMNRN
HHHHHHHCCC
>Mature Secondary Structure 
ARERKISLNELFAQTKQLLLEHGYEGFTFGLLAERLGVARSAIYKYFENKEELITTYMV
CCCHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
NEMEEVFIKLEHIHVYPTFDEQFRFLLDFILYHNDLHEMISIGKRIPENHPKVQENKQRL
HHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
AQFHKRMYEELEHLIKRGKQEGKIKPHLPNQVILGYIFQSVSVPHFPGISLAEWVESIRE
HHHHHHHHHHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
IIMYGVMNRN
HHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA