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The map label for this gene is dnrN [H]

Identifier: 138894332

GI number: 138894332

Start: 739110

End: 739817

Strand: Reverse

Name: dnrN [H]

Synonym: GTNG_0660

Alternate gene names: 138894332

Gene position: 739817-739110 (Counterclockwise)

Preceding gene: 138894339

Following gene: 138894329

Centisome position: 20.84

GC content: 51.98

Gene sequence:

>708_bases
ATGGAACAGCGTTTTACCGAACAATCGTTGATTGGTGATATTGTTACGCAATTTCCGAAAGCAGCCGACTTATTTAAAGC
ACGACGCATTGATTTTTGCTGCGGCGGACAGCGCCCGTTAAAAGAAGCCATTGAAGAGCGCGGACTTGATGGCGAAGCGC
TCCTTCGCGAGCTGAACGCCCTTTATGCGGAGGCACAAAACAAGCCGACTGGAAACTGGAGCGAAGCGCCGCTGACCGAC
TTGGTCGATCATATCGTCAGCACACACCACCGCTATTTGAACGAAGAACTGCCGCAGCTCAGCCCATATGTCACAAAAGT
ATTGCGCGTACACGGCATGCACCACCCGCACCTTTCTCGCGTGCATAAACTGTTCCATGAGTTAAAAACGGAGCTTGAGC
AACACTTGATTAAAGAAGAAACAGGAGCTTTTCCGCTCATTTTACAATTTGCCGACAACCCATCGCCGGAAAACCGAGAG
GCGGTCGAGCGGGCCGTTCGCGAACTCGTCAATGAACATGACGCAGCCGGCGATTTGATCAAAGAAATTCGCGAAATCAC
AAACGACTTCACCCCGCCGGAAGACGCGTGCGGCACATATCGGCTCGTTTACAGCCGACTCGCGGCGCTCGAAGAAGATT
TGTTTACCCACATCCATTTAGAAAACAACGTCCTCTTCCCGCGCGTGTTGGCAGCGGTGAAGGCGTAA

Upstream 100 bases:

>100_bases
CTGTCCACTTTTTTTCGTATATGTGAGATCCATCACAACACCTTAGCGGCAAACACGTTATGCTGAAACTGTAACGATTT
GATCAATGGAGGGATCCGAA

Downstream 100 bases:

>100_bases
GCAAGCCAAACCATTCCCCCATTTCTAAGGTAAAGGCAGGCGCGTCGAGCGATAAAAAGCGGGGCTGCTTCTTCGATGGA
AAGAGCAGCCCCGCTTCTTT

Product: nitric oxide-dependent regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MEQRFTEQSLIGDIVTQFPKAADLFKARRIDFCCGGQRPLKEAIEERGLDGEALLRELNALYAEAQNKPTGNWSEAPLTD
LVDHIVSTHHRYLNEELPQLSPYVTKVLRVHGMHHPHLSRVHKLFHELKTELEQHLIKEETGAFPLILQFADNPSPENRE
AVERAVRELVNEHDAAGDLIKEIREITNDFTPPEDACGTYRLVYSRLAALEEDLFTHIHLENNVLFPRVLAAVKA

Sequences:

>Translated_235_residues
MEQRFTEQSLIGDIVTQFPKAADLFKARRIDFCCGGQRPLKEAIEERGLDGEALLRELNALYAEAQNKPTGNWSEAPLTD
LVDHIVSTHHRYLNEELPQLSPYVTKVLRVHGMHHPHLSRVHKLFHELKTELEQHLIKEETGAFPLILQFADNPSPENRE
AVERAVRELVNEHDAAGDLIKEIREITNDFTPPEDACGTYRLVYSRLAALEEDLFTHIHLENNVLFPRVLAAVKA
>Mature_235_residues
MEQRFTEQSLIGDIVTQFPKAADLFKARRIDFCCGGQRPLKEAIEERGLDGEALLRELNALYAEAQNKPTGNWSEAPLTD
LVDHIVSTHHRYLNEELPQLSPYVTKVLRVHGMHHPHLSRVHKLFHELKTELEQHLIKEETGAFPLILQFADNPSPENRE
AVERAVRELVNEHDAAGDLIKEIREITNDFTPPEDACGTYRLVYSRLAALEEDLFTHIHLENNVLFPRVLAAVKA

Specific function: Involved in peptidoglycan cross-linking. Required for normal cell growth and development [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scdA family [H]

Homologues:

Organism=Escherichia coli, GI1790654, Length=222, Percent_Identity=36.9369369369369, Blast_Score=145, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 26837; Mature: 26837

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQRFTEQSLIGDIVTQFPKAADLFKARRIDFCCGGQRPLKEAIEERGLDGEALLRELNA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHH
LYAEAQNKPTGNWSEAPLTDLVDHIVSTHHRYLNEELPQLSPYVTKVLRVHGMHHPHLSR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
VHKLFHELKTELEQHLIKEETGAFPLILQFADNPSPENREAVERAVRELVNEHDAAGDLI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
KEIREITNDFTPPEDACGTYRLVYSRLAALEEDLFTHIHLENNVLFPRVLAAVKA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MEQRFTEQSLIGDIVTQFPKAADLFKARRIDFCCGGQRPLKEAIEERGLDGEALLRELNA
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHH
LYAEAQNKPTGNWSEAPLTDLVDHIVSTHHRYLNEELPQLSPYVTKVLRVHGMHHPHLSR
HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHH
VHKLFHELKTELEQHLIKEETGAFPLILQFADNPSPENREAVERAVRELVNEHDAAGDLI
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHH
KEIREITNDFTPPEDACGTYRLVYSRLAALEEDLFTHIHLENNVLFPRVLAAVKA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA