Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is tra905 [H]
Identifier: 138894303
GI number: 138894303
Start: 704455
End: 705624
Strand: Reverse
Name: tra905 [H]
Synonym: GTNG_0631
Alternate gene names: 138894303
Gene position: 705624-704455 (Counterclockwise)
Preceding gene: 138894304
Following gene: 138894302
Centisome position: 19.87
GC content: 45.64
Gene sequence:
>1170_bases ATGTCTAAAAGAAGTATACCGAATGTCGACTGGGCAAATCAACTGGAAAATGCCATTCGTCAGTTTGTAAAAGAAAAATT AGAACTGATTATGCGGGAAGAAATCAAAAATTTCCTCGAAATCGAACAGGCTGGAACGCCGAATATGAGAAACGGCTACT ATCAGCGAAATCTAGATACACAATATGGCCGGATTGAGGGTCTTTTGGTTCCAAGAGACCGAAACGGGGAATTTCAAACA CAGTTGTTTGCCCCTTACCAACGGCACACGGGCTGGCTGGAGGAAGCAATCATTAGGATGTACCAAAGTGGCATGAGCAC GCGTGAAATTGGCAAGTTTATCGAACGAATTCTAGGAAGCACCTATTCTCCTGCGACGATCAGCCGGATTACCGATGTCG TGAAGGAAGACATCGAGAAATGGCACGCTCGTCCACTACACCAGCGTTATTCGGTCTTATATTTGGACGGCTTGTACGTG AAACTTCGCCGGGATACGGTAGAGAAAGAAGTTATTTATGTGGTATTGGGGGTGAACGAAGAAGGGTATCGTGAAATTCT TGATTTCTTCGTAGGAGGACAAGAAAGCGCCTATGTATGGCAGGAGATTCTCCAACAGCTCTACAAAAGAGGCGTCAAGG AAGTGCTTCTTGGCGTCTTCGATGGCCTTCCGGGGTTGGAGGAAGCCTTTAAGGCGGTGTATCCGAAAGCCGATGTGCAG CGCTGTGTCGTGCACAAAGTCCGCAACACCCTCAGCCGTGTTCGGAAAAAAGATCAATTCGAAATGGCGGAGGACCTGAA ACTCATTTATCGTTCTCCGAATAAAGAAATCGCATTGGAGATGTTTCAACAGTTTCAATCCAAATGGTCTCACAAATACC CAAGGGCAGTCCAATCTTGGGCAAATGAGTTGGATGTCCTTCTCACCTTTATGGACTATCCAAGCAGTATTCGAAGTGTG ATTTATACGACCAATGCCATCGAACGAACGATCAAGGAGATTCGGAAACGCCTAAAACCGATGAACAGTTTGAGCAGTTT AGAAGCCGCTGAAAAAGTCGTATATTTGACGATACAGGACTTTAACGAGAAATGGGCAGGGCGAAAGTTGCGAGGATTTG CCGAAGCGCATGAAGCCCTTCAACGAATGTTTGAAGAACGTTATTGTTAA
Upstream 100 bases:
>100_bases TAAAATTTTGTGTAAAGCATTTTGCTAGAACAAAAGAAAAAAGGTAGGGTATTCTCTGATTTGGACCACAACACATTCCA GAGAAAGGAGTACCCTACCT
Downstream 100 bases:
>100_bases CCAAATATTGTAAATAAACAAAATAAGGGGATTTTCCCTTTCCACACAAGAGACTGAATATTCAGTCTCTTGTGTGAAGG AAACCGGTTCCCTATCCATT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSKRSIPNVDWANQLENAIRQFVKEKLELIMREEIKNFLEIEQAGTPNMRNGYYQRNLDTQYGRIEGLLVPRDRNGEFQT QLFAPYQRHTGWLEEAIIRMYQSGMSTREIGKFIERILGSTYSPATISRITDVVKEDIEKWHARPLHQRYSVLYLDGLYV KLRRDTVEKEVIYVVLGVNEEGYREILDFFVGGQESAYVWQEILQQLYKRGVKEVLLGVFDGLPGLEEAFKAVYPKADVQ RCVVHKVRNTLSRVRKKDQFEMAEDLKLIYRSPNKEIALEMFQQFQSKWSHKYPRAVQSWANELDVLLTFMDYPSSIRSV IYTTNAIERTIKEIRKRLKPMNSLSSLEAAEKVVYLTIQDFNEKWAGRKLRGFAEAHEALQRMFEERYC
Sequences:
>Translated_389_residues MSKRSIPNVDWANQLENAIRQFVKEKLELIMREEIKNFLEIEQAGTPNMRNGYYQRNLDTQYGRIEGLLVPRDRNGEFQT QLFAPYQRHTGWLEEAIIRMYQSGMSTREIGKFIERILGSTYSPATISRITDVVKEDIEKWHARPLHQRYSVLYLDGLYV KLRRDTVEKEVIYVVLGVNEEGYREILDFFVGGQESAYVWQEILQQLYKRGVKEVLLGVFDGLPGLEEAFKAVYPKADVQ RCVVHKVRNTLSRVRKKDQFEMAEDLKLIYRSPNKEIALEMFQQFQSKWSHKYPRAVQSWANELDVLLTFMDYPSSIRSV IYTTNAIERTIKEIRKRLKPMNSLSSLEAAEKVVYLTIQDFNEKWAGRKLRGFAEAHEALQRMFEERYC >Mature_388_residues SKRSIPNVDWANQLENAIRQFVKEKLELIMREEIKNFLEIEQAGTPNMRNGYYQRNLDTQYGRIEGLLVPRDRNGEFQTQ LFAPYQRHTGWLEEAIIRMYQSGMSTREIGKFIERILGSTYSPATISRITDVVKEDIEKWHARPLHQRYSVLYLDGLYVK LRRDTVEKEVIYVVLGVNEEGYREILDFFVGGQESAYVWQEILQQLYKRGVKEVLLGVFDGLPGLEEAFKAVYPKADVQR CVVHKVRNTLSRVRKKDQFEMAEDLKLIYRSPNKEIALEMFQQFQSKWSHKYPRAVQSWANELDVLLTFMDYPSSIRSVI YTTNAIERTIKEIRKRLKPMNSLSSLEAAEKVVYLTIQDFNEKWAGRKLRGFAEAHEALQRMFEERYC
Specific function: Required for the transposition of the insertion element [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 45867; Mature: 45736
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRSIPNVDWANQLENAIRQFVKEKLELIMREEIKNFLEIEQAGTPNMRNGYYQRNLDT CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QYGRIEGLLVPRDRNGEFQTQLFAPYQRHTGWLEEAIIRMYQSGMSTREIGKFIERILGS CCCCCCCEEEECCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC TYSPATISRITDVVKEDIEKWHARPLHQRYSVLYLDGLYVKLRRDTVEKEVIYVVLGVNE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCHHEEHHHHHHHHEEEEEEEECCC EGYREILDFFVGGQESAYVWQEILQQLYKRGVKEVLLGVFDGLPGLEEAFKAVYPKADVQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH RCVVHKVRNTLSRVRKKDQFEMAEDLKLIYRSPNKEIALEMFQQFQSKWSHKYPRAVQSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH ANELDVLLTFMDYPSSIRSVIYTTNAIERTIKEIRKRLKPMNSLSSLEAAEKVVYLTIQD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEH FNEKWAGRKLRGFAEAHEALQRMFEERYC HHHHHCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SKRSIPNVDWANQLENAIRQFVKEKLELIMREEIKNFLEIEQAGTPNMRNGYYQRNLDT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC QYGRIEGLLVPRDRNGEFQTQLFAPYQRHTGWLEEAIIRMYQSGMSTREIGKFIERILGS CCCCCCCEEEECCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC TYSPATISRITDVVKEDIEKWHARPLHQRYSVLYLDGLYVKLRRDTVEKEVIYVVLGVNE CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEECCHHEEHHHHHHHHEEEEEEEECCC EGYREILDFFVGGQESAYVWQEILQQLYKRGVKEVLLGVFDGLPGLEEAFKAVYPKADVQ HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHH RCVVHKVRNTLSRVRKKDQFEMAEDLKLIYRSPNKEIALEMFQQFQSKWSHKYPRAVQSW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHH ANELDVLLTFMDYPSSIRSVIYTTNAIERTIKEIRKRLKPMNSLSSLEAAEKVVYLTIQD HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEEEH FNEKWAGRKLRGFAEAHEALQRMFEERYC HHHHHCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8195098; 11337471 [H]