Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yajQ [C]
Identifier: 138894302
GI number: 138894302
Start: 703684
End: 704175
Strand: Reverse
Name: yajQ [C]
Synonym: GTNG_0630
Alternate gene names: 138894302
Gene position: 704175-703684 (Counterclockwise)
Preceding gene: 138894303
Following gene: 138894301
Centisome position: 19.83
GC content: 46.54
Gene sequence:
>492_bases ATGGCGAAAGAAAGCTCATTTGATATCGTCTCGAAAGTTGATTTGGCCGAGGTGACCAACGCCATCAACATCGCCATGAA AGAAATTAAAACGCGCTATGATTTCAAAGGAAGCAAAAGCGACATTTCCCTAGAGAAAGATGAGCTCGTTCTCATCTCCG ACGACGAGTTTAAGCTTGAACAGTTGAAGGACGTTCTGATTGGCAAGCTCATTAAGCGTGGGGTGGCGACGAAAAACATC CAATACGGCAAAATTGAGCCGGCCTCGGGTGGCACGGTACGCCAGCGCGCCAAGCTTGTCCAAGGGATCGACAAAGATAA TGCGAAGAAAATCAATACGATCATTAAAAGCACCGGCTTAAAGGTAAAAAGCCAAGTGCAAGACGATCAAATTCGCGTCA GCGGCAAAAGCAAAGATGACTTGCAAAAGGTGATCGCCGCCATTCGCGAAGCGGATTTGCCGATTGATGTGCAGTTTGTG AATTATCGATAA
Upstream 100 bases:
>100_bases CAACAACTTTGTCTAATCTTCTCTCCTTCCTTGTTTATTGTTGTCTTTCCTCCCACCTTTTTCTATAATGAAAGTACATC ACACGCCCGGGAGGTTTATT
Downstream 100 bases:
>100_bases GCGGATGAGGCAAACCTCCCATCCGCTTTTTGTTTTACAAGCAGAACGATAGGAATTTTGAAAGAGAAGCTAGCCGGCAA GTTCGCTTATGATATGGATT
Product: putative nucleotide-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MAKESSFDIVSKVDLAEVTNAINIAMKEIKTRYDFKGSKSDISLEKDELVLISDDEFKLEQLKDVLIGKLIKRGVATKNI QYGKIEPASGGTVRQRAKLVQGIDKDNAKKINTIIKSTGLKVKSQVQDDQIRVSGKSKDDLQKVIAAIREADLPIDVQFV NYR
Sequences:
>Translated_163_residues MAKESSFDIVSKVDLAEVTNAINIAMKEIKTRYDFKGSKSDISLEKDELVLISDDEFKLEQLKDVLIGKLIKRGVATKNI QYGKIEPASGGTVRQRAKLVQGIDKDNAKKINTIIKSTGLKVKSQVQDDQIRVSGKSKDDLQKVIAAIREADLPIDVQFV NYR >Mature_162_residues AKESSFDIVSKVDLAEVTNAINIAMKEIKTRYDFKGSKSDISLEKDELVLISDDEFKLEQLKDVLIGKLIKRGVATKNIQ YGKIEPASGGTVRQRAKLVQGIDKDNAKKINTIIKSTGLKVKSQVQDDQIRVSGKSKDDLQKVIAAIREADLPIDVQFVN YR
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=160, Percent_Identity=42.5, Blast_Score=120, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y630_GEOTN (A4IL06)
Other databases:
- EMBL: CP000557 - RefSeq: YP_001124755.1 - ProteinModelPortal: A4IL06 - SMR: A4IL06 - STRING: A4IL06 - GeneID: 4965573 - GenomeReviews: CP000557_GR - KEGG: gtn:GTNG_0630 - NMPDR: fig|420246.5.peg.606 - eggNOG: COG1666 - HOGENOM: HBG290634 - OMA: LQFTNYR - PhylomeDB: A4IL06 - ProtClustDB: PRK05412 - BioCyc: GTHE420246:GTNG_0630-MONOMER - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18165; Mature: 18034
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKESSFDIVSKVDLAEVTNAINIAMKEIKTRYDFKGSKSDISLEKDELVLISDDEFKLE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHH QLKDVLIGKLIKRGVATKNIQYGKIEPASGGTVRQRAKLVQGIDKDNAKKINTIIKSTGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC KVKSQVQDDQIRVSGKSKDDLQKVIAAIREADLPIDVQFVNYR CHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCC >Mature Secondary Structure AKESSFDIVSKVDLAEVTNAINIAMKEIKTRYDFKGSKSDISLEKDELVLISDDEFKLE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHH QLKDVLIGKLIKRGVATKNIQYGKIEPASGGTVRQRAKLVQGIDKDNAKKINTIIKSTGL HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCC KVKSQVQDDQIRVSGKSKDDLQKVIAAIREADLPIDVQFVNYR CHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA