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The map label for this gene is dctR [H]

Identifier: 138894175

GI number: 138894175

Start: 564063

End: 564743

Strand: Reverse

Name: dctR [H]

Synonym: GTNG_0501

Alternate gene names: 138894175

Gene position: 564743-564063 (Counterclockwise)

Preceding gene: 138894176

Following gene: 138894173

Centisome position: 15.91

GC content: 50.51

Gene sequence:

>681_bases
ATGTACCGTGTATTGCTCATTGAAGATGACCCAATGGTCCAAGAAGTGAACCGGCAAATGATTGAACAAGTGAACGGTTT
TGCCGTCGTCGGCCTCGCCGGGAACGGAGAAGAAGGACTGCGCCTCATCGAGGAGCTCCACCCTGATGTAGCGGTCATTG
ACATTTACATGCCGCAATTAGATGGCCTTGAAACGTTAAAGGAAATTCGCGCCCGTGGGCATGAAGTCGACATTCTAGCC
ATCACGGCCGCAAGTGATATTGAAACAGTACGCCGCGTTTTACAAAACGGCGCGTTTGATTATATTGTCAAACCGTTTAA
ATTTGAACGGCTCAAGCAAGCGCTAGAAAACTATCGGGCATTCCGCCAATCGCTCGCCGAAAAACAGTCGCTCACTCAAG
CAGAACTCGATGCGTTGCGGCAAACGGCCGAACGGTATGTCGACCCACTCCCTGAACTTCCAAAAGGATTAAACGAAGTG
ACATTGGAAAAAGTCGTCACTTATTTGCGCCAACAGTGCTCCCCTGTCTCCGCTGAAGAAGTGGCTGAAGGCGTCGGCAT
CGCCCGCGTCACCGCTCGCCGCTACTTAGAATACCTTGAGAAAAGTGGAAAGGTTGTGCTCGATGTGCAATATGGCAGTA
TTGGTCGCCCCGTCAACCGCTATCAGTTGAAACGAATATAG

Upstream 100 bases:

>100_bases
AAGGGACCGTATTTACCATTACATTTGATATGTAACCTTATTCATACAGTGGCAGCCGCATTCGACAAGCCCCTGCCCCA
AGCCAAAGGAGGGAAAGACA

Downstream 100 bases:

>100_bases
CTTACCCGGTAGCCCGCACGACCAACCGGGTAGGCAACTCTTCTTGTTTTCGAGGAACATTTCCTGTCTCCAGCCAATGG
TGAAGAAGCCGAAACGCTTT

Product: two-component response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MYRVLLIEDDPMVQEVNRQMIEQVNGFAVVGLAGNGEEGLRLIEELHPDVAVIDIYMPQLDGLETLKEIRARGHEVDILA
ITAASDIETVRRVLQNGAFDYIVKPFKFERLKQALENYRAFRQSLAEKQSLTQAELDALRQTAERYVDPLPELPKGLNEV
TLEKVVTYLRQQCSPVSAEEVAEGVGIARVTARRYLEYLEKSGKVVLDVQYGSIGRPVNRYQLKRI

Sequences:

>Translated_226_residues
MYRVLLIEDDPMVQEVNRQMIEQVNGFAVVGLAGNGEEGLRLIEELHPDVAVIDIYMPQLDGLETLKEIRARGHEVDILA
ITAASDIETVRRVLQNGAFDYIVKPFKFERLKQALENYRAFRQSLAEKQSLTQAELDALRQTAERYVDPLPELPKGLNEV
TLEKVVTYLRQQCSPVSAEEVAEGVGIARVTARRYLEYLEKSGKVVLDVQYGSIGRPVNRYQLKRI
>Mature_226_residues
MYRVLLIEDDPMVQEVNRQMIEQVNGFAVVGLAGNGEEGLRLIEELHPDVAVIDIYMPQLDGLETLKEIRARGHEVDILA
ITAASDIETVRRVLQNGAFDYIVKPFKFERLKQALENYRAFRQSLAEKQSLTQAELDALRQTAERYVDPLPELPKGLNEV
TLEKVVTYLRQQCSPVSAEEVAEGVGIARVTARRYLEYLEKSGKVVLDVQYGSIGRPVNRYQLKRI

Specific function: Member of the two-component regulatory system dctS/dctR. Essential for expression of dctP [H]

COG id: COG4565

COG function: function code KT; Response regulator of citrate/malate metabolism

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790566, Length=228, Percent_Identity=34.6491228070175, Blast_Score=138, Evalue=3e-34,
Organism=Escherichia coli, GI1786838, Length=219, Percent_Identity=33.3333333333333, Blast_Score=137, Evalue=6e-34,
Organism=Escherichia coli, GI1788550, Length=136, Percent_Identity=33.8235294117647, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1790437, Length=133, Percent_Identity=33.0827067669173, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787473, Length=148, Percent_Identity=36.4864864864865, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87082052, Length=122, Percent_Identity=31.9672131147541, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1788521, Length=177, Percent_Identity=27.1186440677966, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1790299, Length=128, Percent_Identity=32.8125, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787487, Length=116, Percent_Identity=31.0344827586207, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788222, Length=139, Percent_Identity=28.0575539568345, Blast_Score=63, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322044, Length=127, Percent_Identity=30.7086614173228, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 25658; Mature: 25658

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRVLLIEDDPMVQEVNRQMIEQVNGFAVVGLAGNGEEGLRLIEELHPDVAVIDIYMPQL
CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCC
DGLETLKEIRARGHEVDILAITAASDIETVRRVLQNGAFDYIVKPFKFERLKQALENYRA
CCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHH
FRQSLAEKQSLTQAELDALRQTAERYVDPLPELPKGLNEVTLEKVVTYLRQQCSPVSAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
VAEGVGIARVTARRYLEYLEKSGKVVLDVQYGSIGRPVNRYQLKRI
HHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCC
>Mature Secondary Structure
MYRVLLIEDDPMVQEVNRQMIEQVNGFAVVGLAGNGEEGLRLIEELHPDVAVIDIYMPQL
CEEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCEEEEEEECCCC
DGLETLKEIRARGHEVDILAITAASDIETVRRVLQNGAFDYIVKPFKFERLKQALENYRA
CCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHH
FRQSLAEKQSLTQAELDALRQTAERYVDPLPELPKGLNEVTLEKVVTYLRQQCSPVSAEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
VAEGVGIARVTARRYLEYLEKSGKVVLDVQYGSIGRPVNRYQLKRI
HHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA