Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
---|---|
Accession | NC_009328 |
Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is 138894173
Identifier: 138894173
GI number: 138894173
Start: 562117
End: 562806
Strand: Reverse
Name: 138894173
Synonym: GTNG_0499
Alternate gene names: NA
Gene position: 562806-562117 (Counterclockwise)
Preceding gene: 138894175
Following gene: 138894167
Centisome position: 15.85
GC content: 50.58
Gene sequence:
>690_bases ATGGTTCCATATTGGAAATCGCTTTTCTTGATTGCCGTCACCGCTGCCTTTCTTGCCGGTTGCGGTACGGAGACACCTTC ATCAAAAGAGGAAGAAGCGAAAGGAAAACAAACAGTTAGTCTAGACGAGACTTCTACCAACATGCAACCATCAGAACCAA CCGGCCAAGAAATTCCCCCTGTTGATGAACAAAAGCAAGCAGGAGGGGGGCAAAATGGGTCGAAGGGGGATGAAACCGAC TTTTCCCGCCCGACGACTTCGTTGTCTTATCAAATTGGAAATCAAACGGTCACAGGAACAGCAACGTTGACAACAAGCGA CAACCAACATTTTTCGCTCTATGTCCTAGAGGGATGGACACTCGACGCCGAAGAACCGCATGCTGATGTACTGCTCCATG GAGACACGTTTGCCCGCATCCGCCTTCTTCCTAATGAGGAGACAAACTATGAACAATTGGCCAAAGAACATGCCCAAGCG ATTGACGCCAACGCCGCCCGTCAGCAAACTAATCAACTTCCAAAACCGTTCACTGATGCTCTTTGGTACATCGCTCAAGC TGACGGTGTTACCGTCCATGTGATCGCCAGCACCCAACCGGCGCCGATGCTTTTGACAGTGCACGCCCCTAAGGGAAAAG ATGTGCTTGGCGCTGTGCTCGCCATGGTGGCCACACTGCAAAAGCAATAA
Upstream 100 bases:
>100_bases AGAAAGTAAGAAAAAAGGAAAAGTAAGGGGAAGATTCAGTTTGTTTCCACTGTTTCAACTGCTATAATGAATGGTATATG GATAGCAAGGAGGAATCAAG
Downstream 100 bases:
>100_bases CTTGCTAGGGAGGGCTATCGCCCTCCCCTCCTTTTTAATAAAGAAAAACCCCCTTTTTCATTTGCAAGAGGGTCAAACCG GCTGCTCGCTTTCTTCTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 229; Mature: 229
Protein sequence:
>229_residues MVPYWKSLFLIAVTAAFLAGCGTETPSSKEEEAKGKQTVSLDETSTNMQPSEPTGQEIPPVDEQKQAGGGQNGSKGDETD FSRPTTSLSYQIGNQTVTGTATLTTSDNQHFSLYVLEGWTLDAEEPHADVLLHGDTFARIRLLPNEETNYEQLAKEHAQA IDANAARQQTNQLPKPFTDALWYIAQADGVTVHVIASTQPAPMLLTVHAPKGKDVLGAVLAMVATLQKQ
Sequences:
>Translated_229_residues MVPYWKSLFLIAVTAAFLAGCGTETPSSKEEEAKGKQTVSLDETSTNMQPSEPTGQEIPPVDEQKQAGGGQNGSKGDETD FSRPTTSLSYQIGNQTVTGTATLTTSDNQHFSLYVLEGWTLDAEEPHADVLLHGDTFARIRLLPNEETNYEQLAKEHAQA IDANAARQQTNQLPKPFTDALWYIAQADGVTVHVIASTQPAPMLLTVHAPKGKDVLGAVLAMVATLQKQ >Mature_229_residues MVPYWKSLFLIAVTAAFLAGCGTETPSSKEEEAKGKQTVSLDETSTNMQPSEPTGQEIPPVDEQKQAGGGQNGSKGDETD FSRPTTSLSYQIGNQTVTGTATLTTSDNQHFSLYVLEGWTLDAEEPHADVLLHGDTFARIRLLPNEETNYEQLAKEHAQA IDANAARQQTNQLPKPFTDALWYIAQADGVTVHVIASTQPAPMLLTVHAPKGKDVLGAVLAMVATLQKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24693; Mature: 24693
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPYWKSLFLIAVTAAFLAGCGTETPSSKEEEAKGKQTVSLDETSTNMQPSEPTGQEIPP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC VDEQKQAGGGQNGSKGDETDFSRPTTSLSYQIGNQTVTGTATLTTSDNQHFSLYVLEGWT CCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEEEEECEE LDAEEPHADVLLHGDTFARIRLLPNEETNYEQLAKEHAQAIDANAARQQTNQLPKPFTDA ECCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH LWYIAQADGVTVHVIASTQPAPMLLTVHAPKGKDVLGAVLAMVATLQKQ HHEEEECCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPYWKSLFLIAVTAAFLAGCGTETPSSKEEEAKGKQTVSLDETSTNMQPSEPTGQEIPP CCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCCC VDEQKQAGGGQNGSKGDETDFSRPTTSLSYQIGNQTVTGTATLTTSDNQHFSLYVLEGWT CCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCEEEEEEEECEE LDAEEPHADVLLHGDTFARIRLLPNEETNYEQLAKEHAQAIDANAARQQTNQLPKPFTDA ECCCCCCCCEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH LWYIAQADGVTVHVIASTQPAPMLLTVHAPKGKDVLGAVLAMVATLQKQ HHEEEECCCEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA