Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is 138894165
Identifier: 138894165
GI number: 138894165
Start: 545420
End: 545773
Strand: Reverse
Name: 138894165
Synonym: GTNG_0491
Alternate gene names: NA
Gene position: 545773-545420 (Counterclockwise)
Preceding gene: 138894167
Following gene: 138894157
Centisome position: 15.37
GC content: 42.94
Gene sequence:
>354_bases ATGGGTATCAAATATTCGAGTAAAATCAACAAAATTCGCACATTTGCTTTAAGCTTGATTTTCGTCGGCGTCATCGTCAT GTATCTTGGGCTGTTTTTCCGCACGTCCCCGATCATCATGACGCTGTTTATGGTGCTTGGACTTTTATTTCTCGTCGCAA GTGGCATCGTGTACTTTTGGATCGGTACACTCTCAACGAGAGCTGTCCAAGTCGTTTGTCCATCATGCGGTAAGGTGACG AAAATGCTTGGACGCGTTGATTTATGTATGTTTTGCCGCGAGCCCCTGACGTTGGATCGCGAACTTGAAGGAAAAGAATT CGATGAGAAATACAATAAAAAAAGAAAAAACTGA
Upstream 100 bases:
>100_bases TCCTCTATTCTGAGTAAAAAACGCCCATCAATTTTGTTGATTTCTCCTTCACGATTGTCCCCTGTTTTATGGTATAGTGA TGTATGTAGGAGGGACGACC
Downstream 100 bases:
>100_bases TAGCCGCTGTCGCGCTATCAGCTTTTTTAATGTGTCCGCCCCTTCTCGTTTTGACAGTCAGGGCATACTCCATACACTTC CATGCGATGATGATCGACTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 116
Protein sequence:
>117_residues MGIKYSSKINKIRTFALSLIFVGVIVMYLGLFFRTSPIIMTLFMVLGLLFLVASGIVYFWIGTLSTRAVQVVCPSCGKVT KMLGRVDLCMFCREPLTLDRELEGKEFDEKYNKKRKN
Sequences:
>Translated_117_residues MGIKYSSKINKIRTFALSLIFVGVIVMYLGLFFRTSPIIMTLFMVLGLLFLVASGIVYFWIGTLSTRAVQVVCPSCGKVT KMLGRVDLCMFCREPLTLDRELEGKEFDEKYNKKRKN >Mature_116_residues GIKYSSKINKIRTFALSLIFVGVIVMYLGLFFRTSPIIMTLFMVLGLLFLVASGIVYFWIGTLSTRAVQVVCPSCGKVTK MLGRVDLCMFCREPLTLDRELEGKEFDEKYNKKRKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0295 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020912 - ProDom: PD355753 [H]
Pfam domain/function: PF11023 DUF2614 [H]
EC number: NA
Molecular weight: Translated: 13359; Mature: 13228
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIKYSSKINKIRTFALSLIFVGVIVMYLGLFFRTSPIIMTLFMVLGLLFLVASGIVYFW CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IGTLSTRAVQVVCPSCGKVTKMLGRVDLCMFCREPLTLDRELEGKEFDEKYNKKRKN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure GIKYSSKINKIRTFALSLIFVGVIVMYLGLFFRTSPIIMTLFMVLGLLFLVASGIVYFW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH IGTLSTRAVQVVCPSCGKVTKMLGRVDLCMFCREPLTLDRELEGKEFDEKYNKKRKN HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA