Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
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Accession | NC_009328 |
Length | 3,550,319 |
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The map label for this gene is yvcB [H]
Identifier: 138894088
GI number: 138894088
Start: 467599
End: 469527
Strand: Direct
Name: yvcB [H]
Synonym: GTNG_0414
Alternate gene names: 138894088
Gene position: 467599-469527 (Clockwise)
Preceding gene: 138894087
Following gene: 138894089
Centisome position: 13.17
GC content: 44.53
Gene sequence:
>1929_bases ATGATGCCGCAAAAATTAGTGTTAGATACCGATCTGTTGCGCGCGAGAATCATGGCGTTAGAATATGATCATTTGACGGA AGCGGAAATTCGCCGTATTTATATGGAAGAAACGGGAAAGGAACCTCCCGACTACATTAAAGTCTATCATTCAGACGATT TTAAAAAGGGGAGGGATTTCGGCTTTGATGGCACGATTGTTCATTTTTACGATGAGAAACAAGGGATTAATCAAAAATAT ACAATTACTCGTGGAAGTGAAGAACACGAGAACGATACGTGGAAACCGCATGATTGGGCATACAACATGTTTGGCATTTT GGCTGGACAAAGTGATCGTCAATATCGTTACGCGCTTCGTTTTGATAAAATTGTGACAAAAAAAATTCAAGAGGAATTAA AACGGAAAAGAGCAACGATTCCGCTCGAAACGATCGGGATGGGACATTCGCTAGGTGGCAATCTTTCTCAAATGCTTCAA CTAATCGAAAAAAGATTTGACCACGTGTATGTCATTAACGATGCGCCTCCAAGTGTTTACCAGTTATCTTATCTAGACGA AGACTTCTCCTATGATTTAGTCGAGACATTTAATTTAAAAGATAAAGACTTTAACGCCATCTACTCCCTCCCCCCTGCGG AGTTGAAGGCGTTTGCGGAGGAATATTATAAGAAACATGTAGATGAACATTCGATCCATCATTTGACTGCTGAGGAGGAT CTGCTGTATGCGGTGAGCGGGGTGCGGGGATTTATTGATATAGGCAGCCGTGACTGGATCGATACGAACAACCAATTTAC GAGCCTCAAGGGCTTGATTGAGAAGATCCCTGATCAAGATGTAAAGGCGATTCAACTGTATTTCTCGCAATATGCGGATG TATACAATGAAAAGGGCTTGGACGGGGTCGTCCAAGCGATGACAGGGGTCGATCTCGAGTGGATCGAATCGCTTACACAA TATGATGTGGGCGATTATGTATGGAACATGCCTGACATCGTGGAAAAAGTAAGCGATATGTTCAAGGACATGAGAGAGAA AATCCCGGAATTGTTAAAACATATAAAAATATTGCAGCGACATAAAGAGGCGATTCTGCAGGCATTCGTCGACTCCGGTT TTCTCACCATGGAACAAAAAGAAGCGATTTCGCAGGAAGTGAAGCATATTGAGCAAGATGTCAAGAAGCTGGATCAGATA TTGAGCGATGTGCGGAACAACGCGGTTTGGTTCATGGCGCTCGGGGGGCTTTCATCGGGGATCGCACTATTTGTCGTGTT CAAACAGATCAAACATTATGTGACGGATATCCTCGCCCGGCTTCAGACGATTAACCGACATATGGCTGATGTGAGAGAAG CTGCGGTTACGAGTGTCGACGCGCATTCGCTGCATAAGGTGATCAACACCCTCGCACGCGCAAAAGGAAGAGAGTATGAC AAGCAAGGGAATATGATCTTAGTAGGGTGGATCGAGACGGAAAAGGGGACGAAAAAGATTCGCCTGAACATATCGTCAGC GGTACGTCTATATCAGAAGGGGCTGCGCATTACGGAGGAGAAAGAAGCGGTGTTGCGTCAGATAAAGTGGCTTTATATCC AAGAGTATGTCGAAGATTTTGAGGGGAGAAAGCGACAGCTCATAAGAAAGATCGAAGACATGGAACAAAACCCAAGCGCC TACCAGCACTTGTTGGGCTCGTTTTCGTATGACGCGCAACAAGTGTATGTATTGCGTCGAATTGATGTGCATGAGTCGAT TCCTACGATGGATCCGTCCATTCCTGATGCGTTTGAAGGAATGTTTGCGTCCTACGAACAAGAGATTGCCAAAGGGAGGG AGCTCATCGCCAACATCAAACAGGCGTTTGAGCAGTTTTTTGAGAAAGACAAGCAGTTAGCCAATCTTTTTGATTTGCGC TATGAGTAA
Upstream 100 bases:
>100_bases ATGATATAAATAGGAAATGTCACATCGACGTGGCCAAAGAAGAAGAACGAGCGAAAATGTTAATGCACTCTATTAAATTT CAAGATTGAAAGGAGGGGGG
Downstream 100 bases:
>100_bases AGAGGGATGTTACGTATGAGACAATTGAATATGCTTTACCATTTTGATGTGGAGCAAGATTTGATGGACAAGGCAACGGG ATTTATTCAACTGTTGCATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 642; Mature: 642
Protein sequence:
>642_residues MMPQKLVLDTDLLRARIMALEYDHLTEAEIRRIYMEETGKEPPDYIKVYHSDDFKKGRDFGFDGTIVHFYDEKQGINQKY TITRGSEEHENDTWKPHDWAYNMFGILAGQSDRQYRYALRFDKIVTKKIQEELKRKRATIPLETIGMGHSLGGNLSQMLQ LIEKRFDHVYVINDAPPSVYQLSYLDEDFSYDLVETFNLKDKDFNAIYSLPPAELKAFAEEYYKKHVDEHSIHHLTAEED LLYAVSGVRGFIDIGSRDWIDTNNQFTSLKGLIEKIPDQDVKAIQLYFSQYADVYNEKGLDGVVQAMTGVDLEWIESLTQ YDVGDYVWNMPDIVEKVSDMFKDMREKIPELLKHIKILQRHKEAILQAFVDSGFLTMEQKEAISQEVKHIEQDVKKLDQI LSDVRNNAVWFMALGGLSSGIALFVVFKQIKHYVTDILARLQTINRHMADVREAAVTSVDAHSLHKVINTLARAKGREYD KQGNMILVGWIETEKGTKKIRLNISSAVRLYQKGLRITEEKEAVLRQIKWLYIQEYVEDFEGRKRQLIRKIEDMEQNPSA YQHLLGSFSYDAQQVYVLRRIDVHESIPTMDPSIPDAFEGMFASYEQEIAKGRELIANIKQAFEQFFEKDKQLANLFDLR YE
Sequences:
>Translated_642_residues MMPQKLVLDTDLLRARIMALEYDHLTEAEIRRIYMEETGKEPPDYIKVYHSDDFKKGRDFGFDGTIVHFYDEKQGINQKY TITRGSEEHENDTWKPHDWAYNMFGILAGQSDRQYRYALRFDKIVTKKIQEELKRKRATIPLETIGMGHSLGGNLSQMLQ LIEKRFDHVYVINDAPPSVYQLSYLDEDFSYDLVETFNLKDKDFNAIYSLPPAELKAFAEEYYKKHVDEHSIHHLTAEED LLYAVSGVRGFIDIGSRDWIDTNNQFTSLKGLIEKIPDQDVKAIQLYFSQYADVYNEKGLDGVVQAMTGVDLEWIESLTQ YDVGDYVWNMPDIVEKVSDMFKDMREKIPELLKHIKILQRHKEAILQAFVDSGFLTMEQKEAISQEVKHIEQDVKKLDQI LSDVRNNAVWFMALGGLSSGIALFVVFKQIKHYVTDILARLQTINRHMADVREAAVTSVDAHSLHKVINTLARAKGREYD KQGNMILVGWIETEKGTKKIRLNISSAVRLYQKGLRITEEKEAVLRQIKWLYIQEYVEDFEGRKRQLIRKIEDMEQNPSA YQHLLGSFSYDAQQVYVLRRIDVHESIPTMDPSIPDAFEGMFASYEQEIAKGRELIANIKQAFEQFFEKDKQLANLFDLR YE >Mature_642_residues MMPQKLVLDTDLLRARIMALEYDHLTEAEIRRIYMEETGKEPPDYIKVYHSDDFKKGRDFGFDGTIVHFYDEKQGINQKY TITRGSEEHENDTWKPHDWAYNMFGILAGQSDRQYRYALRFDKIVTKKIQEELKRKRATIPLETIGMGHSLGGNLSQMLQ LIEKRFDHVYVINDAPPSVYQLSYLDEDFSYDLVETFNLKDKDFNAIYSLPPAELKAFAEEYYKKHVDEHSIHHLTAEED LLYAVSGVRGFIDIGSRDWIDTNNQFTSLKGLIEKIPDQDVKAIQLYFSQYADVYNEKGLDGVVQAMTGVDLEWIESLTQ YDVGDYVWNMPDIVEKVSDMFKDMREKIPELLKHIKILQRHKEAILQAFVDSGFLTMEQKEAISQEVKHIEQDVKKLDQI LSDVRNNAVWFMALGGLSSGIALFVVFKQIKHYVTDILARLQTINRHMADVREAAVTSVDAHSLHKVINTLARAKGREYD KQGNMILVGWIETEKGTKKIRLNISSAVRLYQKGLRITEEKEAVLRQIKWLYIQEYVEDFEGRKRQLIRKIEDMEQNPSA YQHLLGSFSYDAQQVYVLRRIDVHESIPTMDPSIPDAFEGMFASYEQEIAKGRELIANIKQAFEQFFEKDKQLANLFDLR YE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74849; Mature: 74849
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPQKLVLDTDLLRARIMALEYDHLTEAEIRRIYMEETGKEPPDYIKVYHSDDFKKGRDF CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCC GFDGTIVHFYDEKQGINQKYTITRGSEEHENDTWKPHDWAYNMFGILAGQSDRQYRYALR CCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHH FDKIVTKKIQEELKRKRATIPLETIGMGHSLGGNLSQMLQLIEKRFDHVYVINDAPPSVY HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCE QLSYLDEDFSYDLVETFNLKDKDFNAIYSLPPAELKAFAEEYYKKHVDEHSIHHLTAEED EEHHCCCCCCCHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHH LLYAVSGVRGFIDIGSRDWIDTNNQFTSLKGLIEKIPDQDVKAIQLYFSQYADVYNEKGL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH DGVVQAMTGVDLEWIESLTQYDVGDYVWNMPDIVEKVSDMFKDMREKIPELLKHIKILQR HHHHHHHHCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKEAILQAFVDSGFLTMEQKEAISQEVKHIEQDVKKLDQILSDVRNNAVWFMALGGLSSG HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH IALFVVFKQIKHYVTDILARLQTINRHMADVREAAVTSVDAHSLHKVINTLARAKGREYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC KQGNMILVGWIETEKGTKKIRLNISSAVRLYQKGLRITEEKEAVLRQIKWLYIQEYVEDF CCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGRKRQLIRKIEDMEQNPSAYQHLLGSFSYDAQQVYVLRRIDVHESIPTMDPSIPDAFEG HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH MFASYEQEIAKGRELIANIKQAFEQFFEKDKQLANLFDLRYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMPQKLVLDTDLLRARIMALEYDHLTEAEIRRIYMEETGKEPPDYIKVYHSDDFKKGRDF CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHEEEECCCCCCCCCCC GFDGTIVHFYDEKQGINQKYTITRGSEEHENDTWKPHDWAYNMFGILAGQSDRQYRYALR CCCCCEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCHHHHHH FDKIVTKKIQEELKRKRATIPLETIGMGHSLGGNLSQMLQLIEKRFDHVYVINDAPPSVY HHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCE QLSYLDEDFSYDLVETFNLKDKDFNAIYSLPPAELKAFAEEYYKKHVDEHSIHHLTAEED EEHHCCCCCCCHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCHHH LLYAVSGVRGFIDIGSRDWIDTNNQFTSLKGLIEKIPDQDVKAIQLYFSQYADVYNEKGL HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH DGVVQAMTGVDLEWIESLTQYDVGDYVWNMPDIVEKVSDMFKDMREKIPELLKHIKILQR HHHHHHHHCCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKEAILQAFVDSGFLTMEQKEAISQEVKHIEQDVKKLDQILSDVRNNAVWFMALGGLSSG HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCH IALFVVFKQIKHYVTDILARLQTINRHMADVREAAVTSVDAHSLHKVINTLARAKGREYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC KQGNMILVGWIETEKGTKKIRLNISSAVRLYQKGLRITEEKEAVLRQIKWLYIQEYVEDF CCCCEEEEEEEECCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EGRKRQLIRKIEDMEQNPSAYQHLLGSFSYDAQQVYVLRRIDVHESIPTMDPSIPDAFEG HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHH MFASYEQEIAKGRELIANIKQAFEQFFEKDKQLANLFDLRYE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]