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The map label for this gene is yvcA [H]

Identifier: 138894087

GI number: 138894087

Start: 466988

End: 467587

Strand: Direct

Name: yvcA [H]

Synonym: GTNG_0413

Alternate gene names: 138894087

Gene position: 466988-467587 (Clockwise)

Preceding gene: 138894086

Following gene: 138894088

Centisome position: 13.15

GC content: 36.67

Gene sequence:

>600_bases
ATGGAGGAACAGAAAGAACAGCCGAAGGAATGGCCGGACACGGTCGCGTTTCAGGATGAGTATACCCGAAAGTTTCTCGT
GTCGCCGAAGGAAGTAAAGGACGGATATTATTTGTTTCGTTCACAAACAGGTGGTTTTACAATGTTGTTTCCAGAAGAAG
CGAGAATGGACGAAGGGTTGTATGAAAAGCATGAAAAAGATTACGAACGTTCATTTATAAGGGGAAGTCGAAAAAAGGAA
AATGTCGCATATACTATCCATGTCATTTATGAAAATGACGAAATAACGGAAGATATAGATACGAATCTATTTCTATTATC
GTCAAAAGCTTATGCGGATTATGATGGAGAATATAAAAAAATGAAAGGAGATAAGGTGACGATTTATTTCGCCAAAAAAG
AACGGCATACATCGAACAATGGAAAACAGAACGTTGTCTACAAGTTTTTTGCCTCTATTAAATCGAATCATAGTCATCAA
GCAGTGCAATTTATATATACAATTGGTTGTGATGATATAAATAGGAAATGTCACATCGACGTGGCCAAAGAAGAAGAACG
AGCGAAAATGTTAATGCACTCTATTAAATTTCAAGATTGA

Upstream 100 bases:

>100_bases
TATGGATAGAATGGAACAGAGTGGAAAGGAATGAGTGGCCTTGAAAAGATATTGGCAAGCGTTATGGTTATCGGCACTTG
TATTGATGGGAGGATGTCAC

Downstream 100 bases:

>100_bases
AAGGAGGGGGGATGATGCCGCAAAAATTAGTGTTAGATACCGATCTGTTGCGCGCGAGAATCATGGCGTTAGAATATGAT
CATTTGACGGAAGCGGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MEEQKEQPKEWPDTVAFQDEYTRKFLVSPKEVKDGYYLFRSQTGGFTMLFPEEARMDEGLYEKHEKDYERSFIRGSRKKE
NVAYTIHVIYENDEITEDIDTNLFLLSSKAYADYDGEYKKMKGDKVTIYFAKKERHTSNNGKQNVVYKFFASIKSNHSHQ
AVQFIYTIGCDDINRKCHIDVAKEEERAKMLMHSIKFQD

Sequences:

>Translated_199_residues
MEEQKEQPKEWPDTVAFQDEYTRKFLVSPKEVKDGYYLFRSQTGGFTMLFPEEARMDEGLYEKHEKDYERSFIRGSRKKE
NVAYTIHVIYENDEITEDIDTNLFLLSSKAYADYDGEYKKMKGDKVTIYFAKKERHTSNNGKQNVVYKFFASIKSNHSHQ
AVQFIYTIGCDDINRKCHIDVAKEEERAKMLMHSIKFQD
>Mature_199_residues
MEEQKEQPKEWPDTVAFQDEYTRKFLVSPKEVKDGYYLFRSQTGGFTMLFPEEARMDEGLYEKHEKDYERSFIRGSRKKE
NVAYTIHVIYENDEITEDIDTNLFLLSSKAYADYDGEYKKMKGDKVTIYFAKKERHTSNNGKQNVVYKFFASIKSNHSHQ
AVQFIYTIGCDDINRKCHIDVAKEEERAKMLMHSIKFQD

Specific function: Required for complex colony architecture [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004983 [H]

Pfam domain/function: PF03304 Mlp [H]

EC number: NA

Molecular weight: Translated: 23611; Mature: 23611

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEQKEQPKEWPDTVAFQDEYTRKFLVSPKEVKDGYYLFRSQTGGFTMLFPEEARMDEGL
CCCCCCCCCCCCCCEEECHHHHHHHCCCCHHHCCCEEEEEECCCCEEEECCCHHHHCCHH
YEKHEKDYERSFIRGSRKKENVAYTIHVIYENDEITEDIDTNLFLLSSKAYADYDGEYKK
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHE
MKGDKVTIYFAKKERHTSNNGKQNVVYKFFASIKSNHSHQAVQFIYTIGCDDINRKCHID
ECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEE
VAKEEERAKMLMHSIKFQD
ECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEEQKEQPKEWPDTVAFQDEYTRKFLVSPKEVKDGYYLFRSQTGGFTMLFPEEARMDEGL
CCCCCCCCCCCCCCEEECHHHHHHHCCCCHHHCCCEEEEEECCCCEEEECCCHHHHCCHH
YEKHEKDYERSFIRGSRKKENVAYTIHVIYENDEITEDIDTNLFLLSSKAYADYDGEYKK
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCHHE
MKGDKVTIYFAKKERHTSNNGKQNVVYKFFASIKSNHSHQAVQFIYTIGCDDINRKCHID
ECCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCEEEEE
VAKEEERAKMLMHSIKFQD
ECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]