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The map label for this gene is yfkF [H]

Identifier: 138894068

GI number: 138894068

Start: 443498

End: 444631

Strand: Reverse

Name: yfkF [H]

Synonym: GTNG_0394

Alternate gene names: 138894068

Gene position: 444631-443498 (Counterclockwise)

Preceding gene: 138894071

Following gene: 138894067

Centisome position: 12.52

GC content: 52.82

Gene sequence:

>1134_bases
ATGCGTTTTGCCATTTTAACCGGAATTGTCGCCATCTCCGGCTTATCTCAGGGGATGCTGCTTCCGTTGTTAGCCATGTT
GCTTGACGAAAGCGGCGTCTCTTCAACCGTTAACGGAGCGCACGCTGCCGCACTTTATATAGGAGTGCTTGCCATTTCAC
CGTTTTTGGAGCATCCACTAGGCAAATATGGATACAAGCCCATGATTATCATGGGTGGTTTTATTGTAATATGTTCGCTC
ATCCTTTTTCCACTTTTTTCTTCATTTTTCCTTTGGTTGGTTATTCGTTTTTTCATCGGAATGGGCGATCATATGCTTCA
TTTTGCGACCCAAACATGGATTACCGACTTTTCACCGCCGGCTGAGCGCGGGCGGCGGCTGTCGCTGTACGGCCTAGCGT
TTGGCCTTGGTTTTACGGCTGGCCCGCTTCTCGCTTCACTCGCCTCGATTAACGAGGCGCTGCCGTTTTATTTGGCCGCT
CTCCTCAGCTTCATCGGGTGGATTGCCGTCTTTTGTCTGCCAAATGAAAAACCAAAAGCATTTGAACGCTCTTCCTCCGC
TGCCGGGCGATGGATCGGTGCATGGAAATATGCTTGGCCGGCGCTCTTGCTGCCGCTTGCTTATGGCTTTTTGGAAGCGG
CCATTCATTCCGTTTTCCCACTATACGCCTTGCATAAACGGATGAGCGCCGAACAGATTACGTTGATTTTGCCGTTTTTC
TCATTCGGCGGCATCATCTTTCAGCTTCCGCTCGGAGCTCTTAGCGACCGGTTCGGGCGTCGTGTTGCCATCACGGGCGC
GCTGCTGGCCGGCATCAGCTGTTTTTTGACCGCGCTCGTTGTTGACACATCGACAGTTGGGCTTGCTACCTGCTTGTTTG
CGGCGGGAATGTTTACGGGGTCACTCTTCTCGCTTGGCATTGCCTATATGACCGACCTGTTGCCGAAAACGCTCCTTCCA
GCCGGCAATTTGTTGTCCGGCATGCTATACAGCCTCGGCAGCATCATCGGTCCGCCACTTGCCGGCAGCGCTGTTGATGT
GACAGCGGACGCTTTTTTCCTTGCGGTCAGCGCTGTTCTCCTCATTCCAGCCGTTTGCCTTGCCAGACGACGGGAACGAG
AAAAAGCGGCTTGA

Upstream 100 bases:

>100_bases
TTCATATGTACGATGAATACGAAACGATACATTGGTCCGTAAAAAAGCGCGGCCCTGTTCGTTTCATTGTCCGCCATTTT
ACAGAAATGAGGGTGCAACG

Downstream 100 bases:

>100_bases
CCGCATTTTTTATTTTTCTATTTTTTTAAAAAATTCATTGACCACTCTGTTCCCTCTGTTATACAATAAAACCAAGATAT
TTAGTTTCTGTTTTAAAACA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MRFAILTGIVAISGLSQGMLLPLLAMLLDESGVSSTVNGAHAAALYIGVLAISPFLEHPLGKYGYKPMIIMGGFIVICSL
ILFPLFSSFFLWLVIRFFIGMGDHMLHFATQTWITDFSPPAERGRRLSLYGLAFGLGFTAGPLLASLASINEALPFYLAA
LLSFIGWIAVFCLPNEKPKAFERSSSAAGRWIGAWKYAWPALLLPLAYGFLEAAIHSVFPLYALHKRMSAEQITLILPFF
SFGGIIFQLPLGALSDRFGRRVAITGALLAGISCFLTALVVDTSTVGLATCLFAAGMFTGSLFSLGIAYMTDLLPKTLLP
AGNLLSGMLYSLGSIIGPPLAGSAVDVTADAFFLAVSAVLLIPAVCLARRREREKAA

Sequences:

>Translated_377_residues
MRFAILTGIVAISGLSQGMLLPLLAMLLDESGVSSTVNGAHAAALYIGVLAISPFLEHPLGKYGYKPMIIMGGFIVICSL
ILFPLFSSFFLWLVIRFFIGMGDHMLHFATQTWITDFSPPAERGRRLSLYGLAFGLGFTAGPLLASLASINEALPFYLAA
LLSFIGWIAVFCLPNEKPKAFERSSSAAGRWIGAWKYAWPALLLPLAYGFLEAAIHSVFPLYALHKRMSAEQITLILPFF
SFGGIIFQLPLGALSDRFGRRVAITGALLAGISCFLTALVVDTSTVGLATCLFAAGMFTGSLFSLGIAYMTDLLPKTLLP
AGNLLSGMLYSLGSIIGPPLAGSAVDVTADAFFLAVSAVLLIPAVCLARRREREKAA
>Mature_377_residues
MRFAILTGIVAISGLSQGMLLPLLAMLLDESGVSSTVNGAHAAALYIGVLAISPFLEHPLGKYGYKPMIIMGGFIVICSL
ILFPLFSSFFLWLVIRFFIGMGDHMLHFATQTWITDFSPPAERGRRLSLYGLAFGLGFTAGPLLASLASINEALPFYLAA
LLSFIGWIAVFCLPNEKPKAFERSSSAAGRWIGAWKYAWPALLLPLAYGFLEAAIHSVFPLYALHKRMSAEQITLILPFF
SFGGIIFQLPLGALSDRFGRRVAITGALLAGISCFLTALVVDTSTVGLATCLFAAGMFTGSLFSLGIAYMTDLLPKTLLP
AGNLLSGMLYSLGSIIGPPLAGSAVDVTADAFFLAVSAVLLIPAVCLARRREREKAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787126, Length=365, Percent_Identity=22.4657534246575, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40302; Mature: 40302

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFAILTGIVAISGLSQGMLLPLLAMLLDESGVSSTVNGAHAAALYIGVLAISPFLEHPL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GKYGYKPMIIMGGFIVICSLILFPLFSSFFLWLVIRFFIGMGDHMLHFATQTWITDFSPP
HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH
AERGRRLSLYGLAFGLGFTAGPLLASLASINEALPFYLAALLSFIGWIAVFCLPNEKPKA
HHHCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FERSSSAAGRWIGAWKYAWPALLLPLAYGFLEAAIHSVFPLYALHKRMSAEQITLILPFF
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEHH
SFGGIIFQLPLGALSDRFGRRVAITGALLAGISCFLTALVVDTSTVGLATCLFAAGMFTG
HHCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SLFSLGIAYMTDLLPKTLLPAGNLLSGMLYSLGSIIGPPLAGSAVDVTADAFFLAVSAVL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LIPAVCLARRREREKAA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRFAILTGIVAISGLSQGMLLPLLAMLLDESGVSSTVNGAHAAALYIGVLAISPFLEHPL
CCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GKYGYKPMIIMGGFIVICSLILFPLFSSFFLWLVIRFFIGMGDHMLHFATQTWITDFSPP
HHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH
AERGRRLSLYGLAFGLGFTAGPLLASLASINEALPFYLAALLSFIGWIAVFCLPNEKPKA
HHHCCEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
FERSSSAAGRWIGAWKYAWPALLLPLAYGFLEAAIHSVFPLYALHKRMSAEQITLILPFF
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEEHH
SFGGIIFQLPLGALSDRFGRRVAITGALLAGISCFLTALVVDTSTVGLATCLFAAGMFTG
HHCHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SLFSLGIAYMTDLLPKTLLPAGNLLSGMLYSLGSIIGPPLAGSAVDVTADAFFLAVSAVL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LIPAVCLARRREREKAA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]