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The map label for this gene is 138893955

Identifier: 138893955

GI number: 138893955

Start: 316172

End: 316918

Strand: Direct

Name: 138893955

Synonym: GTNG_0279

Alternate gene names: NA

Gene position: 316172-316918 (Clockwise)

Preceding gene: 138893946

Following gene: 138893956

Centisome position: 8.91

GC content: 47.26

Gene sequence:

>747_bases
ATGAGACTGACCATTACCATGAATGGGCGGCAGGGTCCTGTGTCGCTGCCGCTTCATTATCAGCATTTGTTGCAAGGGCT
ATTGTATCGATCACTAGAAAGTAAACAACTCGCGACGTTTTTACATGAGATTGGATTCCGCCATGAGAAGCGGTCTTTCA
AACTGTTTACGTTTAGCCGCCTTTTTGGACGACATGAAGTGGACCGGGTGAAGAAAACGATACGGTTTTTGGACGAATTC
CAATGGCATATCGATACGATCCTTCCAGAGTTGACCGAGCAACTCGGGCAGCAGTTGTTGCTGCGGCGGGAGATTTGGCT
TTACGATCAGCCGGTTGAAGTCAAAAGTGTGAAAATGGACAAGGTTGAGATCCGTCAAAGCACAATCGAGGTGGCTATGC
TTTCTCCGCTAACTGTATACAGCACATATGAGACGATCGATAGAAGAAAGAAAACTCATTTTTTCGGGCCGGATGATGAG
GTATTTCCCCATCTCATTGAGCTGAATTTTCGCCATAAATATCAAGCGTACTATGGTGTCCCGCCGGTGGAGAGATTGTC
AATTCAACCCGTTCATGTCCACCAACGCCATCGCGTTGTGACACTATTCAAAGATATGTATATTACAGGGTGGTTGGGGC
ATTACCGTCTCTCCTCTTCTCCCGAGCAGTTGACGTTTTTATACCACGTTGGCCTGGGCAGCCGAAATTCCCAAGGGTTC
GGCATGTTCTGCCTAACGGGTAAATAA

Upstream 100 bases:

>100_bases
ATTTTTATTTCGCCTGCGGTTTTTATCGTACCTATGAGGGATCGAAACGCCTCTGCTTATAAATAAAGAAAGAAGGAATT
ATAGAAAGCAGGGTATTCTC

Downstream 100 bases:

>100_bases
TTCGATTCCTCTATTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTTGTTTTTGTCACTTGGCT
CCTACAGCTATCACGGGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated Cas6 Family Protein; CRISPR-Associated Protein

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MRLTITMNGRQGPVSLPLHYQHLLQGLLYRSLESKQLATFLHEIGFRHEKRSFKLFTFSRLFGRHEVDRVKKTIRFLDEF
QWHIDTILPELTEQLGQQLLLRREIWLYDQPVEVKSVKMDKVEIRQSTIEVAMLSPLTVYSTYETIDRRKKTHFFGPDDE
VFPHLIELNFRHKYQAYYGVPPVERLSIQPVHVHQRHRVVTLFKDMYITGWLGHYRLSSSPEQLTFLYHVGLGSRNSQGF
GMFCLTGK

Sequences:

>Translated_248_residues
MRLTITMNGRQGPVSLPLHYQHLLQGLLYRSLESKQLATFLHEIGFRHEKRSFKLFTFSRLFGRHEVDRVKKTIRFLDEF
QWHIDTILPELTEQLGQQLLLRREIWLYDQPVEVKSVKMDKVEIRQSTIEVAMLSPLTVYSTYETIDRRKKTHFFGPDDE
VFPHLIELNFRHKYQAYYGVPPVERLSIQPVHVHQRHRVVTLFKDMYITGWLGHYRLSSSPEQLTFLYHVGLGSRNSQGF
GMFCLTGK
>Mature_248_residues
MRLTITMNGRQGPVSLPLHYQHLLQGLLYRSLESKQLATFLHEIGFRHEKRSFKLFTFSRLFGRHEVDRVKKTIRFLDEF
QWHIDTILPELTEQLGQQLLLRREIWLYDQPVEVKSVKMDKVEIRQSTIEVAMLSPLTVYSTYETIDRRKKTHFFGPDDE
VFPHLIELNFRHKYQAYYGVPPVERLSIQPVHVHQRHRVVTLFKDMYITGWLGHYRLSSSPEQLTFLYHVGLGSRNSQGF
GMFCLTGK

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29419; Mature: 29419

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTITMNGRQGPVSLPLHYQHLLQGLLYRSLESKQLATFLHEIGFRHEKRSFKLFTFSR
CEEEEEECCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHH
LFGRHEVDRVKKTIRFLDEFQWHIDTILPELTEQLGQQLLLRREIWLYDQPVEVKSVKMD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHH
KVEIRQSTIEVAMLSPLTVYSTYETIDRRKKTHFFGPDDEVFPHLIELNFRHKYQAYYGV
HHHHHHHHHEEHEECCEEEHHHHHHHHHHHHCCCCCCCHHHCHHHEEECCCEEEEEEECC
PPVERLSIQPVHVHQRHRVVTLFKDMYITGWLGHYRLSSSPEQLTFLYHVGLGSRNSQGF
CCHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCE
GMFCLTGK
EEEEEECC
>Mature Secondary Structure
MRLTITMNGRQGPVSLPLHYQHLLQGLLYRSLESKQLATFLHEIGFRHEKRSFKLFTFSR
CEEEEEECCCCCCEECCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEEHHHH
LFGRHEVDRVKKTIRFLDEFQWHIDTILPELTEQLGQQLLLRREIWLYDQPVEVKSVKMD
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHH
KVEIRQSTIEVAMLSPLTVYSTYETIDRRKKTHFFGPDDEVFPHLIELNFRHKYQAYYGV
HHHHHHHHHEEHEECCEEEHHHHHHHHHHHHCCCCCCCHHHCHHHEEECCCEEEEEEECC
PPVERLSIQPVHVHQRHRVVTLFKDMYITGWLGHYRLSSSPEQLTFLYHVGLGSRNSQGF
CCHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEEECCCCCCCCCE
GMFCLTGK
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA