| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is spaC [H]
Identifier: 138893944
GI number: 138893944
Start: 304873
End: 306180
Strand: Direct
Name: spaC [H]
Synonym: GTNG_0268
Alternate gene names: 138893944
Gene position: 304873-306180 (Clockwise)
Preceding gene: 138893943
Following gene: 138893945
Centisome position: 8.59
GC content: 37.23
Gene sequence:
>1308_bases ATGAGCATCTCAATGAAAGCGCTGGTTTGTAATCTTGCGAAAAAATTGTCGGATTATGAGAATATGAAGCGAATCGTCAA TCACCCAAGTAATTATATTAAAATTGGAAACAAGACGATAAATCCGTTTAATGAGTTAAGTTTAAGCCATGGGTTACCAG CCTTATGTGCGCTGTACGGCGAATTGAGCGAACAATATCCGGATGAAGGTTGGGATTTATTAGGGCATCAATACATGAAA AAAATCGGTGAACAAATGAATCAACACGGTTTCCCTTCTTTATCTATGTTTACCGGATTGGCAGGGATCGGCCTTGCTGC AGTATGTTTATCCAAGGGAGGAAAAAGGTATCAAAACTTTATCTCAACGATTAATCAAGTCATCGAAGAAAGAATCGGAG AAATGATCGAGTATTTGAAACAGAAACCGTATCCGAATATGGACGATTACGATGCTATTTCGGGAGTAGCGGGTATAGCG AGCTACTGCCTATTATTTCCGCAAGAGATGAAAAAAAGTATTACGTTAATCTTAAAATACATTATAGATTTATCTCAAGA TAAACAAATGGAGGATATCAACGTTCCTGGCTGGTATATTCCTCCAATGAATGCTTTTTCAGACACCGAAAGGAGAAAAT GGCCATCGGGTTTCTTTAACATTGGGTTGTCTCACGGTATACCTGCTTTACTCATTGTCTTGTGCAATGCCAAAAAACTG AATATTTACGTACATGGGCAAGATGAATGCATTCAAAGAATAGCTGATTTTCTTATGAAGTTTCAAATTAAAGATGAAAA TGGCTCTTATTGGGGGACTCATGTTTCTCTAGAGGAATACAAAAATGGCTCTGTCCTAAACAAAGATACAAGGGATGCCT GGTGTTATGGCACGCCTGGTGTTGCTTATTCGTTACTTATAGCAGGTAAAACTCTAAATAATCAATCATACATTGATTGT GCTGTCAGCGGAATGAAACTGGCAAGCAAACGGCTTTACAACATTTTTTCTCCTTCCTTCTGTCATGGTTTATCGGGAGT TGCGTATATATGCAACAGATTTTATGAAGAAACGAATATCAGCGATTTTAAGGAAGCCGCCTGCAAATTAGTCGATGATA TAATAAAATTTTATAATGAGGAATTCCCTTTTGGCTTTAAAAATATTGAGGAGAGCGAAGGAAGCACGAAATATTATGAT TATGTGGGACTAATCGATGGAACAGCGGGAATTTTATTGACGATATTAGCTATACAAAACTCGAAAAAAACGCCTTGGGA TTGTGCATTTTTATTATCTGAAGTTTAA
Upstream 100 bases:
>100_bases GGTGAAATTGTCGGTATAGGTACGCATTGGGAATTGTTAGCTACGAATGAGTTATACAGAAGAATGTATGAATTGGAAGC TTTGAAAAACGAGGAGGAGT
Downstream 100 bases:
>100_bases ATGTTGTTTATATACAATGGAAAAGCCGACTGATCGATGGTTGGAGGCAAGCCGCAGAGGGGGTTCCATCATACCTTGGC GTACCGATCGGTCGAACAAC
Product: SpaC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MSISMKALVCNLAKKLSDYENMKRIVNHPSNYIKIGNKTINPFNELSLSHGLPALCALYGELSEQYPDEGWDLLGHQYMK KIGEQMNQHGFPSLSMFTGLAGIGLAAVCLSKGGKRYQNFISTINQVIEERIGEMIEYLKQKPYPNMDDYDAISGVAGIA SYCLLFPQEMKKSITLILKYIIDLSQDKQMEDINVPGWYIPPMNAFSDTERRKWPSGFFNIGLSHGIPALLIVLCNAKKL NIYVHGQDECIQRIADFLMKFQIKDENGSYWGTHVSLEEYKNGSVLNKDTRDAWCYGTPGVAYSLLIAGKTLNNQSYIDC AVSGMKLASKRLYNIFSPSFCHGLSGVAYICNRFYEETNISDFKEAACKLVDDIIKFYNEEFPFGFKNIEESEGSTKYYD YVGLIDGTAGILLTILAIQNSKKTPWDCAFLLSEV
Sequences:
>Translated_435_residues MSISMKALVCNLAKKLSDYENMKRIVNHPSNYIKIGNKTINPFNELSLSHGLPALCALYGELSEQYPDEGWDLLGHQYMK KIGEQMNQHGFPSLSMFTGLAGIGLAAVCLSKGGKRYQNFISTINQVIEERIGEMIEYLKQKPYPNMDDYDAISGVAGIA SYCLLFPQEMKKSITLILKYIIDLSQDKQMEDINVPGWYIPPMNAFSDTERRKWPSGFFNIGLSHGIPALLIVLCNAKKL NIYVHGQDECIQRIADFLMKFQIKDENGSYWGTHVSLEEYKNGSVLNKDTRDAWCYGTPGVAYSLLIAGKTLNNQSYIDC AVSGMKLASKRLYNIFSPSFCHGLSGVAYICNRFYEETNISDFKEAACKLVDDIIKFYNEEFPFGFKNIEESEGSTKYYD YVGLIDGTAGILLTILAIQNSKKTPWDCAFLLSEV >Mature_434_residues SISMKALVCNLAKKLSDYENMKRIVNHPSNYIKIGNKTINPFNELSLSHGLPALCALYGELSEQYPDEGWDLLGHQYMKK IGEQMNQHGFPSLSMFTGLAGIGLAAVCLSKGGKRYQNFISTINQVIEERIGEMIEYLKQKPYPNMDDYDAISGVAGIAS YCLLFPQEMKKSITLILKYIIDLSQDKQMEDINVPGWYIPPMNAFSDTERRKWPSGFFNIGLSHGIPALLIVLCNAKKLN IYVHGQDECIQRIADFLMKFQIKDENGSYWGTHVSLEEYKNGSVLNKDTRDAWCYGTPGVAYSLLIAGKTLNNQSYIDCA VSGMKLASKRLYNIFSPSFCHGLSGVAYICNRFYEETNISDFKEAACKLVDDIIKFYNEEFPFGFKNIEESEGSTKYYDY VGLIDGTAGILLTILAIQNSKKTPWDCAFLLSEV
Specific function: Could be implicated in the processing or the export process of the subtilin lantibiotic [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.epidermidis epiC and L.lactis nisC [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007822 - InterPro: IPR020452 [H]
Pfam domain/function: PF05147 LANC_like [H]
EC number: NA
Molecular weight: Translated: 48988; Mature: 48857
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSISMKALVCNLAKKLSDYENMKRIVNHPSNYIKIGNKTINPFNELSLSHGLPALCALYG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHH ELSEQYPDEGWDLLGHQYMKKIGEQMNQHGFPSLSMFTGLAGIGLAAVCLSKGGKRYQNF HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH ISTINQVIEERIGEMIEYLKQKPYPNMDDYDAISGVAGIASYCLLFPQEMKKSITLILKY HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH IIDLSQDKQMEDINVPGWYIPPMNAFSDTERRKWPSGFFNIGLSHGIPALLIVLCNAKKL HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCHHCCHHHHHHHHHCCCEE NIYVHGQDECIQRIADFLMKFQIKDENGSYWGTHVSLEEYKNGSVLNKDTRDAWCYGTPG EEEEECHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCEECCCCH VAYSLLIAGKTLNNQSYIDCAVSGMKLASKRLYNIFSPSFCHGLSGVAYICNRFYEETNI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCC SDFKEAACKLVDDIIKFYNEEFPFGFKNIEESEGSTKYYDYVGLIDGTAGILLTILAIQN CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHHCC SKKTPWDCAFLLSEV CCCCCHHHHHHHHCC >Mature Secondary Structure SISMKALVCNLAKKLSDYENMKRIVNHPSNYIKIGNKTINPFNELSLSHGLPALCALYG CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHH ELSEQYPDEGWDLLGHQYMKKIGEQMNQHGFPSLSMFTGLAGIGLAAVCLSKGGKRYQNF HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHH ISTINQVIEERIGEMIEYLKQKPYPNMDDYDAISGVAGIASYCLLFPQEMKKSITLILKY HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH IIDLSQDKQMEDINVPGWYIPPMNAFSDTERRKWPSGFFNIGLSHGIPALLIVLCNAKKL HHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHHHCCHHCCHHHHHHHHHCCCEE NIYVHGQDECIQRIADFLMKFQIKDENGSYWGTHVSLEEYKNGSVLNKDTRDAWCYGTPG EEEEECHHHHHHHHHHHHHHEEEECCCCCEEEEECCHHHCCCCCCCCCCCCCCEECCCCH VAYSLLIAGKTLNNQSYIDCAVSGMKLASKRLYNIFSPSFCHGLSGVAYICNRFYEETNI HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHCCC SDFKEAACKLVDDIIKFYNEEFPFGFKNIEESEGSTKYYDYVGLIDGTAGILLTILAIQN CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEHEEEEECCHHHHHHHHHHHCC SKKTPWDCAFLLSEV CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1539969; 1735728 [H]