| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is 138893886
Identifier: 138893886
GI number: 138893886
Start: 223973
End: 224461
Strand: Direct
Name: 138893886
Synonym: GTNG_0210
Alternate gene names: NA
Gene position: 223973-224461 (Clockwise)
Preceding gene: 138893885
Following gene: 138893887
Centisome position: 6.31
GC content: 45.4
Gene sequence:
>489_bases ATGGATCAAAAACGGTTGCAAGCACTCGTTGAACAAATTTCCATAAGCATATTTGGCAAACCGTTTCGCCACACTGCCTC TTTCAACCCAAGACTTCGCACTGTCGGTGGGCGCTACGTGCTGCAAACCCACAACATTGAACTGAACAAAAAATATTACG ACATGTTCGGTGAAGAAGAACTCATCGCCATTATCAAACATGAACTATGCCATTACCATTTGCATCTTGAAGGGAAAGGC TACCGTCATCGCGACCGTGACTTTCGTGAGCTGTTGAAAAAAGTAGGGGCGCCTCGCTATTGCCGCCCGCTCAAACAAGA AACAAAAGCAACTAAAGCGATCCATACATACATCTGCACATCGTGCGGATTAGTATATAACCGTAAAAGACGAATCAACA CCGACCGTTACGTCTGCGGCCGTTGCCACGGTCGGCTCAAGTTGGCTGAAGATGAAACAAAGCAAAACATTTTACAAAAA AGAGGTTGA
Upstream 100 bases:
>100_bases ACGTAGGCAAGGCAGTCACCTCCCTGACAACGGAAAGGTAGTATATAATGTATGTAGTTGCACATTGTCCTGTGCCAAAA ACATAAGGGGGACGCCCGCT
Downstream 100 bases:
>100_bases CAATCAAGATTATCATATGCTAAATTATAAAAGCCGTCGCCAAACGGCGAAACAAATAACAACAAACAAAAAAACATATT GACAAACAACAAGTTGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MDQKRLQALVEQISISIFGKPFRHTASFNPRLRTVGGRYVLQTHNIELNKKYYDMFGEEELIAIIKHELCHYHLHLEGKG YRHRDRDFRELLKKVGAPRYCRPLKQETKATKAIHTYICTSCGLVYNRKRRINTDRYVCGRCHGRLKLAEDETKQNILQK RG
Sequences:
>Translated_162_residues MDQKRLQALVEQISISIFGKPFRHTASFNPRLRTVGGRYVLQTHNIELNKKYYDMFGEEELIAIIKHELCHYHLHLEGKG YRHRDRDFRELLKKVGAPRYCRPLKQETKATKAIHTYICTSCGLVYNRKRRINTDRYVCGRCHGRLKLAEDETKQNILQK RG >Mature_162_residues MDQKRLQALVEQISISIFGKPFRHTASFNPRLRTVGGRYVLQTHNIELNKKYYDMFGEEELIAIIKHELCHYHLHLEGKG YRHRDRDFRELLKKVGAPRYCRPLKQETKATKAIHTYICTSCGLVYNRKRRINTDRYVCGRCHGRLKLAEDETKQNILQK RG
Specific function: Unknown
COG id: COG3091
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sprT family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006640 [H]
Pfam domain/function: PF10263 SprT-like [H]
EC number: NA
Molecular weight: Translated: 19187; Mature: 19187
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKRLQALVEQISISIFGKPFRHTASFNPRLRTVGGRYVLQTHNIELNKKYYDMFGEEE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCEEECHHHHHHCCCHH LIAIIKHELCHYHLHLEGKGYRHRDRDFRELLKKVGAPRYCRPLKQETKATKAIHTYICT HHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SCGLVYNRKRRINTDRYVCGRCHGRLKLAEDETKQNILQKRG HHHHHHCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHCC >Mature Secondary Structure MDQKRLQALVEQISISIFGKPFRHTASFNPRLRTVGGRYVLQTHNIELNKKYYDMFGEEE CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCEEEEEECCEEECHHHHHHCCCHH LIAIIKHELCHYHLHLEGKGYRHRDRDFRELLKKVGAPRYCRPLKQETKATKAIHTYICT HHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH SCGLVYNRKRRINTDRYVCGRCHGRLKLAEDETKQNILQKRG HHHHHHCCCCCCCCCCEEEECCCCCEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA