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The map label for this gene is ybfM [H]

Identifier: 138893872

GI number: 138893872

Start: 209810

End: 210406

Strand: Direct

Name: ybfM [H]

Synonym: GTNG_0196

Alternate gene names: 138893872

Gene position: 209810-210406 (Clockwise)

Preceding gene: 138893871

Following gene: 138893873

Centisome position: 5.91

GC content: 52.43

Gene sequence:

>597_bases
ATGGATACGGGCGCATGGTTGCCTTATGTTCAGTCATATGGATATGTAATGCTGCTTTTGTTTTTATTTTGCGGCATCGT
CGGCATCCCGGCACCGGAGGAAAGTTTGCTTTTCTTCGTCGGTGTGGTGATTGCGAAAAATCAATTGCTGCTTTGGCCGA
CGCTTGTCTCGTGCTGGGGTGGAACGATGGCCGGCATGGTGGCGGCGTATGGCGCCGGCAGACGGTGGGGATCGCCGCTT
GTGCAAAAGTATGGCAAGTATGTCGGAATTACAGACGAACGGTGGGAGCGATCCCGCGATTGGTTTTGCCGCTACGGGAA
ATGGGGCATTTTGTTTGGTTGCTATGTCCCGGGGGTGCGGCAAATATGTCCGTATATGGCAGGGGTGAGCCGGTTCCCGT
TTCGGACGTTTCTTTTGCTGGCTATGCTGGGGACAGCTGGCTGGGTCGTTCCGCTGACATTGGTTGGTCTATTGCTTGGC
CAACATATCCATATCCCCCTGATTTCTTTTCCGCTTGCCGGTTTGGGATTGTTTTTGCTCTTTTTGTTGGCGACATGGAT
TGGACAGCGGAGACGCAAAAAATCTGTTGAAAGCTAA

Upstream 100 bases:

>100_bases
CTCAAAGACGAAGTAGCGAAAAAGATGCGTTGGGTGACGATTACGGAACTGAGAAACGCGCAAACTAACAAACAAATCTC
GTCGATGTGATGGGGGAGCT

Downstream 100 bases:

>100_bases
AGGTGCGATCGATGATGAAAGTGTTGTTTTTGCCGCTGTTTCAAATGAATACGGGACACCATAAAGTGGCCGATACGTTG
ATCGATTTTTTGCATCGCCA

Product: alkaline phosphatase like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDTGAWLPYVQSYGYVMLLLFLFCGIVGIPAPEESLLFFVGVVIAKNQLLLWPTLVSCWGGTMAGMVAAYGAGRRWGSPL
VQKYGKYVGITDERWERSRDWFCRYGKWGILFGCYVPGVRQICPYMAGVSRFPFRTFLLLAMLGTAGWVVPLTLVGLLLG
QHIHIPLISFPLAGLGLFLLFLLATWIGQRRRKKSVES

Sequences:

>Translated_198_residues
MDTGAWLPYVQSYGYVMLLLFLFCGIVGIPAPEESLLFFVGVVIAKNQLLLWPTLVSCWGGTMAGMVAAYGAGRRWGSPL
VQKYGKYVGITDERWERSRDWFCRYGKWGILFGCYVPGVRQICPYMAGVSRFPFRTFLLLAMLGTAGWVVPLTLVGLLLG
QHIHIPLISFPLAGLGLFLLFLLATWIGQRRRKKSVES
>Mature_198_residues
MDTGAWLPYVQSYGYVMLLLFLFCGIVGIPAPEESLLFFVGVVIAKNQLLLWPTLVSCWGGTMAGMVAAYGAGRRWGSPL
VQKYGKYVGITDERWERSRDWFCRYGKWGILFGCYVPGVRQICPYMAGVSRFPFRTFLLLAMLGTAGWVVPLTLVGLLLG
QHIHIPLISFPLAGLGLFLLFLLATWIGQRRRKKSVES

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22175; Mature: 22175

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTGAWLPYVQSYGYVMLLLFLFCGIVGIPAPEESLLFFVGVVIAKNQLLLWPTLVSCWG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GTMAGMVAAYGAGRRWGSPLVQKYGKYVGITDERWERSRDWFCRYGKWGILFGCYVPGVR
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
QICPYMAGVSRFPFRTFLLLAMLGTAGWVVPLTLVGLLLGQHIHIPLISFPLAGLGLFLL
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FLLATWIGQRRRKKSVES
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDTGAWLPYVQSYGYVMLLLFLFCGIVGIPAPEESLLFFVGVVIAKNQLLLWPTLVSCWG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHC
GTMAGMVAAYGAGRRWGSPLVQKYGKYVGITDERWERSRDWFCRYGKWGILFGCYVPGVR
HHHHHHHHHHCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCHH
QICPYMAGVSRFPFRTFLLLAMLGTAGWVVPLTLVGLLLGQHIHIPLISFPLAGLGLFLL
HHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
FLLATWIGQRRRKKSVES
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]