Click here to switch to the map view.

The map label for this gene is catD [H]

Identifier: 138893842

GI number: 138893842

Start: 177402

End: 177809

Strand: Direct

Name: catD [H]

Synonym: GTNG_0166

Alternate gene names: 138893842

Gene position: 177402-177809 (Clockwise)

Preceding gene: 138893841

Following gene: 138893844

Centisome position: 5.0

GC content: 47.79

Gene sequence:

>408_bases
ATGGTGCAAAAATACAAATGGGCGTTATTGATTTTGCGGGTCGCTTTAGGGTTGACGTTCTTTATTCACGGCGTTGCCAA
ATTCCAAATGGGTCTTGGCAATGTAGCCGGTTGGTTTGAAAGCATCGGTGTTGCCGGATTCCTCGGTTACGTTGTCGCCT
TCATTGAATTGACTGGGGGAGTGGCTTTAATCGTAGGATTAGGAACAAGAGTTATTTCGGCGCTGCTTGCATTCGTGATG
TCTGGCGCGACCTTCACTGTCAAGCTGCCGGCCGGTTTCATGGGCAATAGCCAAACCGCAGGGTATGAATTGGATGTTGT
CTTATTGTCTGTAGCTATTGCCCTTTGCCTCAGCGGCAGCCAGCTATTCGCCTTGGATAATAAATGGTTTGGATCGTCAA
AGAACTAA

Upstream 100 bases:

>100_bases
AAGCCACAGGCGTTCCAAGTGGAACAAGTCAACGTGATGCTTGATGAGCTTTTATTATGGAGCGTTAAAAACTGTAAGAT
AAAATGAAGGCGAACGAATA

Downstream 100 bases:

>100_bases
TAAGACAAGATTTCCCTGTTTCTTCACTAGAAATTTACTTTGGAGCACACGTTACGGAAAAGATGGGAATCACTCCGAAC
GTGTGCTTTTTGTTGGACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MVQKYKWALLILRVALGLTFFIHGVAKFQMGLGNVAGWFESIGVAGFLGYVVAFIELTGGVALIVGLGTRVISALLAFVM
SGATFTVKLPAGFMGNSQTAGYELDVVLLSVAIALCLSGSQLFALDNKWFGSSKN

Sequences:

>Translated_135_residues
MVQKYKWALLILRVALGLTFFIHGVAKFQMGLGNVAGWFESIGVAGFLGYVVAFIELTGGVALIVGLGTRVISALLAFVM
SGATFTVKLPAGFMGNSQTAGYELDVVLLSVAIALCLSGSQLFALDNKWFGSSKN
>Mature_135_residues
MVQKYKWALLILRVALGLTFFIHGVAKFQMGLGNVAGWFESIGVAGFLGYVVAFIELTGGVALIVGLGTRVISALLAFVM
SGATFTVKLPAGFMGNSQTAGYELDVVLLSVAIALCLSGSQLFALDNKWFGSSKN

Specific function: Essential for growth and viability in the presence of catechol and probably involved in the detoxification of catechol [H]

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 14241; Mature: 14241

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKYKWALLILRVALGLTFFIHGVAKFQMGLGNVAGWFESIGVAGFLGYVVAFIELTGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VALIVGLGTRVISALLAFVMSGATFTVKLPAGFMGNSQTAGYELDVVLLSVAIALCLSGS
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
QLFALDNKWFGSSKN
EEEEECCCCCCCCCC
>Mature Secondary Structure
MVQKYKWALLILRVALGLTFFIHGVAKFQMGLGNVAGWFESIGVAGFLGYVVAFIELTGG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
VALIVGLGTRVISALLAFVMSGATFTVKLPAGFMGNSQTAGYELDVVLLSVAIALCLSGS
HHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
QLFALDNKWFGSSKN
EEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8704981; 9384377 [H]