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The map label for this gene is 13474994

Identifier: 13474994

GI number: 13474994

Start: 4837641

End: 4838873

Strand: Direct

Name: 13474994

Synonym: mlr5980

Alternate gene names: NA

Gene position: 4837641-4838873 (Clockwise)

Preceding gene: 13474993

Following gene: 13474998

Centisome position: 68.75

GC content: 64.07

Gene sequence:

>1233_bases
TTGGGGATCGCAAGAGCGTCCAACCGATGGCGGCGCGACGCAGGCGTCAACTATGACCAGCTGCACCACTTCATCGCGAG
CGGCGTGTGGGATGCTGCGCCGCTGGAGAAGGTGCTGCTCGCGGAGGCCGACAGACAAGTTGGCGGGAACGATGCGTGGC
TGATCGTGGACGACACCGCGCTGCCCAAGAAGGGGCGCCACTCGGTCGGCGTCGCGCCGCAATATGCCTCGGCGCTTGGC
AAGAACGCCAACTGCCAGACGCTGGTGTCGCTGACGCTGGCCTCTGGCGAAGTGCCGGTCATGGTGGGGCTGCGGCTGTT
TGTGCCCGAGAGCTGGACTTCCGATCCCGCCCGGCTCGACCGTGCCGGTGTGCCCGAGGACCATCGTGCCTACAGGACCA
AGCCCGAGATCGCACTGGCCGAGATCGACCGGGCTCGCGCAGCCGGCTTACGCTTTGGCTGCGTGCTCGCCGATGCCGGA
TATGGCTTCAGCGCCCCCTTCCGGCAGGCGCTCACCGAGCGCGGCCCAAGGCTTGCAGCCACCCATGTTCCTGAAGCTAT
AGCCTTCGCTACCAAGCCAGGCTTGGCTGTCGATATGATACGGCGTGCGTTGGCAGCCGATGTGCCGTTTTCATGGGTGG
CCGCAGATGCGGTGTATGGCGTCGGGGACGTCGAAGGAACCGTGCGCCGAGCCTGCAAAGGCTACGTTCTTGGGGTTAAA
TCGGACCATCATTTCGGCTCCTGGTCGGGCAAGCCTCCGGTCGCCGGCACGGCTCAGGAGATCGCCCGTGATCTCGATCC
AAGTGCATGGCAGCGTCTTTCCGCCGGAGAGGGCACCAAAGGTGCGCGGCTTCATGACTGGGCCTACTGCGAACTCGCCG
ATCTCGATGCCGACGAATATAACGAGACGAAATCGGGACTTTGGACCCGTGGCCTCCTGATCCGGCGCAATATCAGCGAC
GGTGATCTCGCATTCTTCACGACATGGTGCCCGGCCGGGACGGGCATCCAGACGCTCGTTTCCGTTGAAGGCCATCGCTG
GGCGATCGAAGACAGCTTCGAGGCCGCCAAGAACGAGCTCGGACTCGATCACAACGAAACCCGGTCATGGCATGGCTGGC
ATCGCCACGTCTCCCTCGTCATGCTCGCCTTCGCCATGATGGCGGCGATCCGGTACCGCGCCAATGACGCGACGCCCCAA
AAAAGACCGCGGATGCCGACCATCAGGATCTGA

Upstream 100 bases:

>100_bases
CAACTCGATCTGGAGCGGTGGCTTGAGCCGTTCGTCTCGGCGTTGAGGCACAAGACGCGTGCGCGGATGTGTCCGGCCTA
TATTGCTGGGCTGATTGGCC

Downstream 100 bases:

>100_bases
TCCGCTGGTCTATCCAGGAAGTCCGGCGCATGCCACCAGGCTTGCCCAGCGCCGCATAAAGCCCGCCGACGTCATTGCGT
GGTCATGCTGGAGGCGCGCC

Product: transposase

Products: NA

Alternate protein names: IS4 Family Transposase; ISXo8 Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; Regulatory; FOG Transposase; Transcriptional Regulator; ISRSO17-Transposase; Transposase IS; Isrso17-Transposase Protein; IS6 Family Transposase; Transposase ISRS; LOW QUALITY PROTEIN Transposase; Transposase-Like Protein; Transposase Helper Protein B Fragment; Transposase IS4 Protein; Transposase Remnant; Transposase Of; IS Sequence; Transposase Protein; LOW QUALITY PROTEIN IS4 Family Transposase

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGIARASNRWRRDAGVNYDQLHHFIASGVWDAAPLEKVLLAEADRQVGGNDAWLIVDDTALPKKGRHSVGVAPQYASALG
KNANCQTLVSLTLASGEVPVMVGLRLFVPESWTSDPARLDRAGVPEDHRAYRTKPEIALAEIDRARAAGLRFGCVLADAG
YGFSAPFRQALTERGPRLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVK
SDHHFGSWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISD
GDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQ
KRPRMPTIRI

Sequences:

>Translated_410_residues
MGIARASNRWRRDAGVNYDQLHHFIASGVWDAAPLEKVLLAEADRQVGGNDAWLIVDDTALPKKGRHSVGVAPQYASALG
KNANCQTLVSLTLASGEVPVMVGLRLFVPESWTSDPARLDRAGVPEDHRAYRTKPEIALAEIDRARAAGLRFGCVLADAG
YGFSAPFRQALTERGPRLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVK
SDHHFGSWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISD
GDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQ
KRPRMPTIRI
>Mature_409_residues
GIARASNRWRRDAGVNYDQLHHFIASGVWDAAPLEKVLLAEADRQVGGNDAWLIVDDTALPKKGRHSVGVAPQYASALGK
NANCQTLVSLTLASGEVPVMVGLRLFVPESWTSDPARLDRAGVPEDHRAYRTKPEIALAEIDRARAAGLRFGCVLADAGY
GFSAPFRQALTERGPRLAATHVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVKS
DHHFGSWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEYNETKSGLWTRGLLIRRNISDG
DLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNELGLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQK
RPRMPTIRI

Specific function: Unknown

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44767; Mature: 44636

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIARASNRWRRDAGVNYDQLHHFIASGVWDAAPLEKVLLAEADRQVGGNDAWLIVDDTA
CCCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
LPKKGRHSVGVAPQYASALGKNANCQTLVSLTLASGEVPVMVGLRLFVPESWTSDPARLD
CCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHC
RAGVPEDHRAYRTKPEIALAEIDRARAAGLRFGCVLADAGYGFSAPFRQALTERGPRLAA
CCCCCCHHHHHCCCCCEEHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEH
THVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVK
HHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEC
SDHHFGSWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEY
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEECCEEEEEEECCCCHHC
NETKSGLWTRGLLIRRNISDGDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNEL
CHHHCCHHHCCEEEEECCCCCCEEEEEEECCCCCCHHHHEEECCCEEEECCHHHHHHHHC
GLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMPTIRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GIARASNRWRRDAGVNYDQLHHFIASGVWDAAPLEKVLLAEADRQVGGNDAWLIVDDTA
CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCC
LPKKGRHSVGVAPQYASALGKNANCQTLVSLTLASGEVPVMVGLRLFVPESWTSDPARLD
CCCCCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCHHHHC
RAGVPEDHRAYRTKPEIALAEIDRARAAGLRFGCVLADAGYGFSAPFRQALTERGPRLAA
CCCCCCHHHHHCCCCCEEHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEH
THVPEAIAFATKPGLAVDMIRRALAADVPFSWVAADAVYGVGDVEGTVRRACKGYVLGVK
HHCCHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHCCEEEEEC
SDHHFGSWSGKPPVAGTAQEIARDLDPSAWQRLSAGEGTKGARLHDWAYCELADLDADEY
CCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEECCEEEEEEECCCCHHC
NETKSGLWTRGLLIRRNISDGDLAFFTTWCPAGTGIQTLVSVEGHRWAIEDSFEAAKNEL
CHHHCCHHHCCEEEEECCCCCCEEEEEEECCCCCCHHHHEEECCCEEEECCHHHHHHHHC
GLDHNETRSWHGWHRHVSLVMLAFAMMAAIRYRANDATPQKRPRMPTIRI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA