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The map label for this gene is 13474993

Identifier: 13474993

GI number: 13474993

Start: 4837141

End: 4837368

Strand: Direct

Name: 13474993

Synonym: msr5979

Alternate gene names: NA

Gene position: 4837141-4837368 (Clockwise)

Preceding gene: 13474992

Following gene: 13474994

Centisome position: 68.75

GC content: 65.79

Gene sequence:

>228_bases
GTGTGCCAGGGAAAGGCCTGCCGGGAATGGCTCGCCGCGCGGCAGGACGAGCTCCTGCCGGTTCCCTATTTCCACGTGGT
GCTCACGCTGCCGGCCGAGATCGCCGCGATCGCCTTCCAGAACAAGGCGGCGGTGTACACGATCCTGTTCAAGGCCCGCA
TCGTGAACGCCCTTCACCAGCCTGGCACCGACGATCCCGACCGCTCCTCCAGGCTACAATCCCCATAG

Upstream 100 bases:

>100_bases
AATTGGAAACAGGCTCAACCTCGGATCCGTAACAACACGAGGAGATAATCCATGAAGCCGTAAGCCGTACACAATCCGGT
TGACCCGAGTTCGCCCATGT

Downstream 100 bases:

>100_bases
CGCCAGACCGTCCCGCGGCTTCGTTCAATCCGGCTTGCAATGAGGTCCGACAATCAGCCGGCCCGCTTCGTCGAGCATGC
GGACCTCACAGAAGCCTCCA

Product: transposase

Products: NA

Alternate protein names: Transposase For Insertion Sequence Element; Transposase Y4QJ; Transposase Number 2 For Insertion Sequence NGRIS-16a; Transposase Family

Number of amino acids: Translated: 75; Mature: 75

Protein sequence:

>75_residues
MCQGKACREWLAARQDELLPVPYFHVVLTLPAEIAAIAFQNKAAVYTILFKARIVNALHQPGTDDPDRSSRLQSP

Sequences:

>Translated_75_residues
MCQGKACREWLAARQDELLPVPYFHVVLTLPAEIAAIAFQNKAAVYTILFKARIVNALHQPGTDDPDRSSRLQSP
>Mature_75_residues
MCQGKACREWLAARQDELLPVPYFHVVLTLPAEIAAIAFQNKAAVYTILFKARIVNALHQPGTDDPDRSSRLQSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8363; Mature: 8363

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCQGKACREWLAARQDELLPVPYFHVVLTLPAEIAAIAFQNKAAVYTILFKARIVNALHQ
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PGTDDPDRSSRLQSP
CCCCCCCCCCCCCCC
>Mature Secondary Structure
MCQGKACREWLAARQDELLPVPYFHVVLTLPAEIAAIAFQNKAAVYTILFKARIVNALHQ
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHC
PGTDDPDRSSRLQSP
CCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA