| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13474949
Identifier: 13474949
GI number: 13474949
Start: 4808392
End: 4809291
Strand: Direct
Name: 13474949
Synonym: mlr5944
Alternate gene names: NA
Gene position: 4808392-4809291 (Clockwise)
Preceding gene: 13474948
Following gene: 13474950
Centisome position: 68.34
GC content: 56.11
Gene sequence:
>900_bases ATGACGAACTCGATCATGGCATTGCCATCCTCGATCAGGCACTACAGGAGAAAACAAATGGCGATTAATCAAGTAGCTCA AACGCCGGCCATCTCGCCTCTTACGATCAAGGAACGAACCGGCTCGATCAGCACTGCGGAGATGATCTCGGTCCTGAAAG GAGAGACCACGGCCCTGCACATCAAGCAAGCTTTCAGTACCGAAGTAGCCGAGGAGATCACCACGAATTTTCTTGGCAGT CCCGGTCTCAAGGAGCGTAAGGATGGGGTACCCGGACAATATGTCGGCGCTTCCCATTACAGGAAAGATGCAGCGACGTA TTTCGCAGAGTCGGAAACGGCGCGGCCGCACGTCGACGCCCTTTTTGAGAATTTGGTTGATCCGGTGCGCGGATCGTTCG ACGCGTTGAAGCGCGAGCTTCACAAACAGGGCATTGAATTGCGGCTGGCCCGTTCGGAGCACGGTCACGCTAATGTTTGT CGCGCTCTCAGCTGGTCTGGCAGCGGCACGTTTTCCTTGGACCCCCACGACGATGTCGCTCAAGTGTTAAGTGCTGGGAA CGATTACGAGCTTTCTGCGGTGGCGCACAACACCGTCGCAGCACTCAACTTTTATCCCAGCATGCCTGAGGAAGGTGGAA ACTTGAGGCTCTGGAGTCACAAGCCGACAGTCGCGGATCGAAAGTCGCAGGGTGTGGAGACCACGGGATATCCCTACTCC TCAGCTTATCTCGAGGCCGTTCCTTGTCGCGAGTTCCAGCTCAAGCCCGGGGATATCGCCCTAATTGATGGCGGGTTCGT TCACGGGGTTACCGGTCAATCAGGCAACGGAAAGCGTCGCCTGGTGCTGAACAGCTTTTTCGGATTTGCGCGGCCGGACC TTGTTCTCTGGTGGACCTGA
Upstream 100 bases:
>100_bases GGCCGTGTGCACGATGTCGCGTTCGAAAACGGCCTGCTGATCGAATCCTCGGGGCCAAATCGCGACGTCATCAAAGTCCT TCCGCCGATAACCATCTCAG
Downstream 100 bases:
>100_bases CCTCCGATATCATAGCGACTGACCGGCTCCCGCCAGCAGTTCTCCCTAGGGCGCATTCGGGACCTTCATCTATGGCATGC TCCCTGGCGTCATATCAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTNSIMALPSSIRHYRRKQMAINQVAQTPAISPLTIKERTGSISTAEMISVLKGETTALHIKQAFSTEVAEEITTNFLGS PGLKERKDGVPGQYVGASHYRKDAATYFAESETARPHVDALFENLVDPVRGSFDALKRELHKQGIELRLARSEHGHANVC RALSWSGSGTFSLDPHDDVAQVLSAGNDYELSAVAHNTVAALNFYPSMPEEGGNLRLWSHKPTVADRKSQGVETTGYPYS SAYLEAVPCREFQLKPGDIALIDGGFVHGVTGQSGNGKRRLVLNSFFGFARPDLVLWWT
Sequences:
>Translated_299_residues MTNSIMALPSSIRHYRRKQMAINQVAQTPAISPLTIKERTGSISTAEMISVLKGETTALHIKQAFSTEVAEEITTNFLGS PGLKERKDGVPGQYVGASHYRKDAATYFAESETARPHVDALFENLVDPVRGSFDALKRELHKQGIELRLARSEHGHANVC RALSWSGSGTFSLDPHDDVAQVLSAGNDYELSAVAHNTVAALNFYPSMPEEGGNLRLWSHKPTVADRKSQGVETTGYPYS SAYLEAVPCREFQLKPGDIALIDGGFVHGVTGQSGNGKRRLVLNSFFGFARPDLVLWWT >Mature_298_residues TNSIMALPSSIRHYRRKQMAINQVAQTPAISPLTIKERTGSISTAEMISVLKGETTALHIKQAFSTEVAEEITTNFLGSP GLKERKDGVPGQYVGASHYRKDAATYFAESETARPHVDALFENLVDPVRGSFDALKRELHKQGIELRLARSEHGHANVCR ALSWSGSGTFSLDPHDDVAQVLSAGNDYELSAVAHNTVAALNFYPSMPEEGGNLRLWSHKPTVADRKSQGVETTGYPYSS AYLEAVPCREFQLKPGDIALIDGGFVHGVTGQSGNGKRRLVLNSFFGFARPDLVLWWT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32744; Mature: 32613
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSIMALPSSIRHYRRKQMAINQVAQTPAISPLTIKERTGSISTAEMISVLKGETTALH CCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEE IKQAFSTEVAEEITTNFLGSPGLKERKDGVPGQYVGASHYRKDAATYFAESETARPHVDA HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH LFENLVDPVRGSFDALKRELHKQGIELRLARSEHGHANVCRALSWSGSGTFSLDPHDDVA HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHEECCCCCEEECCCCHHHH QVLSAGNDYELSAVAHNTVAALNFYPSMPEEGGNLRLWSHKPTVADRKSQGVETTGYPYS HHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCC SAYLEAVPCREFQLKPGDIALIDGGFVHGVTGQSGNGKRRLVLNSFFGFARPDLVLWWT CHHEEECCCCCEEECCCCEEEECCCEEEECCCCCCCCCEEEEEEHHCCCCCCCEEEEEC >Mature Secondary Structure TNSIMALPSSIRHYRRKQMAINQVAQTPAISPLTIKERTGSISTAEMISVLKGETTALH CCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCEEEE IKQAFSTEVAEEITTNFLGSPGLKERKDGVPGQYVGASHYRKDAATYFAESETARPHVDA HHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHH LFENLVDPVRGSFDALKRELHKQGIELRLARSEHGHANVCRALSWSGSGTFSLDPHDDVA HHHHHHHHHCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHEECCCCCEEECCCCHHHH QVLSAGNDYELSAVAHNTVAALNFYPSMPEEGGNLRLWSHKPTVADRKSQGVETTGYPYS HHHHCCCCEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCCC SAYLEAVPCREFQLKPGDIALIDGGFVHGVTGQSGNGKRRLVLNSFFGFARPDLVLWWT CHHEEECCCCCEEECCCCEEEECCCEEEECCCCCCCCCEEEEEEHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA