Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
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Accession | NC_002678 |
Length | 7,036,071 |
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The map label for this gene is 13474916
Identifier: 13474916
GI number: 13474916
Start: 4770105
End: 4770404
Strand: Direct
Name: 13474916
Synonym: msr5902
Alternate gene names: NA
Gene position: 4770105-4770404 (Clockwise)
Preceding gene: 13474912
Following gene: 13474917
Centisome position: 67.8
GC content: 63.0
Gene sequence:
>300_bases ATGAGCAGCTCGCAAAAACGCGCCATTCAAAACTATCGATCTCGCCTCAGCGAGCGCGGCTTGGCGCGCTTCGAGGTGCT TGGCCGCGATGCCGATCGCGACCTCATTCGATCTTTGGCTCGCCGCCTGGCCGAAGATGGACCGGATGCCTCTAGCCTGC GCGCTGCTGTCAGCCAGACCATCGCCGGCGAGCCACCCAAGCTTGTCGGGATTCTCGCCGCATTGCGTCGTTCGCCGCTC GTGGGAGCTGACCTCGATCTTTCCAGCCCCCATGAAGAGGGGCGGAAGATCGACCTGTGA
Upstream 100 bases:
>100_bases ATGAAGACTGTCTTTCTATTTAGATCTGTATGTTCCTTCTTGTTGTGGTTATGATGTATGTCGAATGTATTATGTATGTG TGTTGTAGTCGGAGGCAGCT
Downstream 100 bases:
>100_bases CACGCTACCTCCTCGATACCAACATCATCAGCGATGTCGTCAAATCGCAGCCTTCGGAATCGCTCCTGGCATGGATGTCG AGACAGCGTGACGAGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSSSQKRAIQNYRSRLSERGLARFEVLGRDADRDLIRSLARRLAEDGPDASSLRAAVSQTIAGEPPKLVGILAALRRSPL VGADLDLSSPHEEGRKIDL
Sequences:
>Translated_99_residues MSSSQKRAIQNYRSRLSERGLARFEVLGRDADRDLIRSLARRLAEDGPDASSLRAAVSQTIAGEPPKLVGILAALRRSPL VGADLDLSSPHEEGRKIDL >Mature_98_residues SSSQKRAIQNYRSRLSERGLARFEVLGRDADRDLIRSLARRLAEDGPDASSLRAAVSQTIAGEPPKLVGILAALRRSPLV GADLDLSSPHEEGRKIDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10792; Mature: 10661
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSQKRAIQNYRSRLSERGLARFEVLGRDADRDLIRSLARRLAEDGPDASSLRAAVSQT CCCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH IAGEPPKLVGILAALRRSPLVGADLDLSSPHEEGRKIDL HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SSSQKRAIQNYRSRLSERGLARFEVLGRDADRDLIRSLARRLAEDGPDASSLRAAVSQT CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHH IAGEPPKLVGILAALRRSPLVGADLDLSSPHEEGRKIDL HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA