| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hisC3
Identifier: 13474816
GI number: 13474816
Start: 4666145
End: 4667254
Strand: Direct
Name: hisC3
Synonym: mlr5786
Alternate gene names: 13474816
Gene position: 4666145-4667254 (Clockwise)
Preceding gene: 13474815
Following gene: 13474817
Centisome position: 66.32
GC content: 51.71
Gene sequence:
>1110_bases ATGTCCGATGCAAAACTTCAGAGTGTGCTGTCGTCTCTTTCGCAAGTGGCGAGACAGTTAGATGCTCTGCCATCCGATAC ACCAGCGCCGGATTCAAGTTGGGTAAAACTAAACACGAATGAGAACCCCTTCCCGCTTCCGGAAATCATAATGCAAAGTG CGATTGCAGCTCTCGAACGGCAGTATCTATATCCAGAAGACGATAACATCAGCTTGAGAGAAGCAGCCGCGAATGCCTAC AGCGTCTCCATGGATCAGGTGATCGCCGGCAACGGATCGTCTGAACTGCTTGGACTTGTCTACAGAGCATTCCTTACCCC GGGGGATAGCGTGGCGATGATGTCGCCAGGTTTTTCGTTCAACCGCAAACTTGCAACGTTGCAGGGTGCTCAATTTGTCG AAATCGAATTTAGCAAAGATCATTCCTTGCCGATGGAGCAATTGCTCTTCGGTCCTGCAAAGGACGCCAAGTTCATTCTG CTAGCCAATCCGAACAATCCGACTGGAACGTTCGTTCCGGTGGCCGATATCGAACGCCTGGTAGCGAAATCGGACCGCTT GATCGTGCTGGATGAGGCCTACGTCGACTTTGCACCCGAGAATGGTCTACGCCTCATCAATCGCTATTCGAACCTTCTGG TCTTAAGGACATTTTCGAAAAGCTATGCTGCCGCCGGCGTTCGCGTCGGTTTCGGTTTCGGTCATCCTGAAATTATCGGC AGGCTACGCAACATCCAGAACGTCTTCAACATGAATGTGATCGGGCAGGCGGTTGGTATCAGCGTCCTTGCGCACCGCGC CGCCTATGCAGACAACCACAGACACATCAGGCATGAACGACGGCGAGTGACGCTCGCGCTGTCGCAACTTGGATTTTCCG TAATCCCTTCCCACGCAAACTTCTTGCTTGCCCGCGTGCCAACGGCACAGGACGGCTCATGGTGGCAATCAGCCTTCGCA AGGCAAAAAATACTTGTTGCCGTCTTTCCAGATAAAGGTTTGGAAAATTACATCCGCGTCAGCATCGGTACAAAAGAGCA AATGGATGCGTTTCTTCGTGCCGCTAGTCGTATTAGCAGAATATTGAATATGTCAACACCCCCGCGTTAG
Upstream 100 bases:
>100_bases AATGTGCTGACAACGGCGGTGTGAATGCACTGTTGGTCGGCCATGTGCTCAGACCATCAGTTCATCCCGGATTCCCTCTG CGACTGAAACGGAGAAAAAC
Downstream 100 bases:
>100_bases GCTGCTAAGGCTCTGCTTTAGCATTTCGCAGCCAATAATCCGAGCGATTACACGAGCGAGAAATCTTTAAATTGCTTGGA ATACGCAAGCAACCGTACTT
Product: aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 3
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSDAKLQSVLSSLSQVARQLDALPSDTPAPDSSWVKLNTNENPFPLPEIIMQSAIAALERQYLYPEDDNISLREAAANAY SVSMDQVIAGNGSSELLGLVYRAFLTPGDSVAMMSPGFSFNRKLATLQGAQFVEIEFSKDHSLPMEQLLFGPAKDAKFIL LANPNNPTGTFVPVADIERLVAKSDRLIVLDEAYVDFAPENGLRLINRYSNLLVLRTFSKSYAAAGVRVGFGFGHPEIIG RLRNIQNVFNMNVIGQAVGISVLAHRAAYADNHRHIRHERRRVTLALSQLGFSVIPSHANFLLARVPTAQDGSWWQSAFA RQKILVAVFPDKGLENYIRVSIGTKEQMDAFLRAASRISRILNMSTPPR
Sequences:
>Translated_369_residues MSDAKLQSVLSSLSQVARQLDALPSDTPAPDSSWVKLNTNENPFPLPEIIMQSAIAALERQYLYPEDDNISLREAAANAY SVSMDQVIAGNGSSELLGLVYRAFLTPGDSVAMMSPGFSFNRKLATLQGAQFVEIEFSKDHSLPMEQLLFGPAKDAKFIL LANPNNPTGTFVPVADIERLVAKSDRLIVLDEAYVDFAPENGLRLINRYSNLLVLRTFSKSYAAAGVRVGFGFGHPEIIG RLRNIQNVFNMNVIGQAVGISVLAHRAAYADNHRHIRHERRRVTLALSQLGFSVIPSHANFLLARVPTAQDGSWWQSAFA RQKILVAVFPDKGLENYIRVSIGTKEQMDAFLRAASRISRILNMSTPPR >Mature_368_residues SDAKLQSVLSSLSQVARQLDALPSDTPAPDSSWVKLNTNENPFPLPEIIMQSAIAALERQYLYPEDDNISLREAAANAYS VSMDQVIAGNGSSELLGLVYRAFLTPGDSVAMMSPGFSFNRKLATLQGAQFVEIEFSKDHSLPMEQLLFGPAKDAKFILL ANPNNPTGTFVPVADIERLVAKSDRLIVLDEAYVDFAPENGLRLINRYSNLLVLRTFSKSYAAAGVRVGFGFGHPEIIGR LRNIQNVFNMNVIGQAVGISVLAHRAAYADNHRHIRHERRRVTLALSQLGFSVIPSHANFLLARVPTAQDGSWWQSAFAR QKILVAVFPDKGLENYIRVSIGTKEQMDAFLRAASRISRILNMSTPPR
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=321, Percent_Identity=26.791277258567, Blast_Score=100, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6322075, Length=288, Percent_Identity=27.7777777777778, Blast_Score=95, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS83_RHILO (Q98B00)
Other databases:
- EMBL: BA000012 - RefSeq: NP_106386.1 - ProteinModelPortal: Q98B00 - GeneID: 1229045 - GenomeReviews: BA000012_GR - KEGG: mlo:mlr5786 - NMPDR: fig|266835.1.peg.4489 - HOGENOM: HBG646350 - OMA: KREENDM - ProtClustDB: CLSK506468 - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 40711; Mature: 40580
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAKLQSVLSSLSQVARQLDALPSDTPAPDSSWVKLNTNENPFPLPEIIMQSAIAALER CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH QYLYPEDDNISLREAAANAYSVSMDQVIAGNGSSELLGLVYRAFLTPGDSVAMMSPGFSF HCCCCCCCCCCHHHHHCCHHEEEHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCC NRKLATLQGAQFVEIEFSKDHSLPMEQLLFGPAKDAKFILLANPNNPTGTFVPVADIERL CCCCEEECCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHH VAKSDRLIVLDEAYVDFAPENGLRLINRYSNLLVLRTFSKSYAAAGVRVGFGFGHPEIIG HHCCCCEEEEECHHCCCCCCCCHHHHHHHCCEEEEEECCHHHHHCCEEEECCCCCHHHHH RLRNIQNVFNMNVIGQAVGISVLAHRAAYADNHRHIRHERRRVTLALSQLGFSVIPSHAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC FLLARVPTAQDGSWWQSAFARQKILVAVFPDKGLENYIRVSIGTKEQMDAFLRAASRISR EEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH ILNMSTPPR HHCCCCCCC >Mature Secondary Structure SDAKLQSVLSSLSQVARQLDALPSDTPAPDSSWVKLNTNENPFPLPEIIMQSAIAALER CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHH QYLYPEDDNISLREAAANAYSVSMDQVIAGNGSSELLGLVYRAFLTPGDSVAMMSPGFSF HCCCCCCCCCCHHHHHCCHHEEEHHHEEECCCCHHHHHHHHHHHHCCCCCEEEECCCCCC NRKLATLQGAQFVEIEFSKDHSLPMEQLLFGPAKDAKFILLANPNNPTGTFVPVADIERL CCCCEEECCCEEEEEEECCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCEEEHHHHHHH VAKSDRLIVLDEAYVDFAPENGLRLINRYSNLLVLRTFSKSYAAAGVRVGFGFGHPEIIG HHCCCCEEEEECHHCCCCCCCCHHHHHHHCCEEEEEECCHHHHHCCEEEECCCCCHHHHH RLRNIQNVFNMNVIGQAVGISVLAHRAAYADNHRHIRHERRRVTLALSQLGFSVIPSHAN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC FLLARVPTAQDGSWWQSAFARQKILVAVFPDKGLENYIRVSIGTKEQMDAFLRAASRISR EEEEECCCCCCCHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCHHHHHHHHHHHHHHHH ILNMSTPPR HHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11214968