Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474770

Identifier: 13474770

GI number: 13474770

Start: 4616080

End: 4616709

Strand: Direct

Name: 13474770

Synonym: msr8675

Alternate gene names: NA

Gene position: 4616080-4616709 (Clockwise)

Preceding gene: 13474769

Following gene: 13474771

Centisome position: 65.61

GC content: 57.62

Gene sequence:

>630_bases
GTGGGCAAGAGAGTGCTCTTTAGACGCCGAAATCCTGATGGTCTCTTCGAACGATTGCGCATTTATATGTGGCCGCGCCG
CTCCTTCTCGCGATCGTTTCAGTATGTTTCAAAGCGTATCCTCCGGCTGAACGCCACTCCAACGGCCGTCGCGGCGGGGG
TGGCGGCTGGGGTTTTCGCGTCTTTCTTTCCACTAGGGTCCCATTTCGCCATTGCCGCCATCGTGTGCTGGCTGATTTCA
GGAAACATGGTGGCGGCAGGGCTAGGAACATTTGTCTTTGGCAATCCGCTGACCCTCCCGTTTGTTGTGGGAGCGACTTG
GGAGACCGGCAAGATTATGTTGCATGGCCACATGCAAAGTGACGAACGGCCGGCCCATCTGAGTGAGATGTTGCAGACCC
TTTCAATTTCGCAACTGTGGGCACCGGTCTTAAAGCCCATGCTGTGCGGTGCGGTGCCACTCGGGCTGGTTTTTGGCCTG
TTGTTCTATGGCATCACCCGCTGTGGCATGACAGCCTTCCGCGAAAAGAGGCGCAAGCGACTGGCCGAAAAGGGGAGCCT
GCTCCAGCAGCAGGAAGACATCGTGTTATCACCCCCTCTGCCCACTCGACATCGCCGTGCTGGAGGGTGA

Upstream 100 bases:

>100_bases
CGCTTTCGGACAACCGGTTGATCAGCATATTCGGAACAAAGCAGCACAGGCTGCGTTTTTTCAGAGACGAGGTCCATCCG
TTCAACCGACCGCGTTTGAA

Downstream 100 bases:

>100_bases
ATCGCGGCAGGGCCGCTGTAGAAATGCGTCCGCTCGTCGGAAATATCGCCGCTATAAGCGCTTCCCTACAATTGGCGGCC
CGGATATCTGGAGCCTCCGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLIS
GNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGL
LFYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG

Sequences:

>Translated_209_residues
MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLIS
GNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGL
LFYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG
>Mature_208_residues
GKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFASFFPLGSHFAIAAIVCWLISG
NMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQSDERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLL
FYGITRCGMTAFREKRRKRLAEKGSLLQQQEDIVLSPPLPTRHRRAGG

Specific function: Unknown

COG id: COG3216

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23227; Mature: 23096

Theoretical pI: Translated: 11.85; Mature: 11.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFA
CCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SFFPLGSHFAIAAIVCWLISGNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQS
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCC
DERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLLFYGITRCGMTAFREKRRKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEKGSLLQQQEDIVLSPPLPTRHRRAGG
HHHHHHHHHHCCCEEECCCCCCCCCCCCC
>Mature Secondary Structure 
GKRVLFRRRNPDGLFERLRIYMWPRRSFSRSFQYVSKRILRLNATPTAVAAGVAAGVFA
CCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
SFFPLGSHFAIAAIVCWLISGNMVAAGLGTFVFGNPLTLPFVVGATWETGKIMLHGHMQS
HHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCC
DERPAHLSEMLQTLSISQLWAPVLKPMLCGAVPLGLVFGLLFYGITRCGMTAFREKRRKR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAEKGSLLQQQEDIVLSPPLPTRHRRAGG
HHHHHHHHHHCCCEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA