| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474408
Identifier: 13474408
GI number: 13474408
Start: 4214349
End: 4215431
Strand: Reverse
Name: 13474408
Synonym: mll5285
Alternate gene names: NA
Gene position: 4215431-4214349 (Counterclockwise)
Preceding gene: 13474409
Following gene: 13474402
Centisome position: 59.91
GC content: 64.27
Gene sequence:
>1083_bases ATGGCTCAGCAAAAAATCACGTTTGGCGGCGTCGACATCCTGCGGTTTCTCGCCGCCGTTCTGGTCATGGTCTACCACTA TGGCTTCTGGGTATGGGCCTATCCCGATGGCATCTCCGCGCAGGCCACGGGCGGCGTGCCGGCGCAGGCTGACATAGGCG CCTGGGTCGGATCCGGCTGGGTCGGCGTCGAGATCTTCTTCGTCATCAGCGGTTTCGTCATCGCCTTCAGCGCCGAGAAG TCGACGCCGCTGCGGTTTTTCGAGGCCAGGCTCAAACGGCTGGCGCCGGCGGTCTGGATCTGCGCACCGGTCACCGCCGT GCTGCTTCTTGCCATCGGCCTGAGCTGGCCGACCGATGCGGTGGTCAGGCTGGTCCGCACCGGGCTGTTCGTGCCCTATG GTCCCTGGGTAGACAGCGTCTACTGGACACTCGGGATCGAGATCGCCTTCTACGCCATCGTCTGGATCCTGCTGCGGCTT GGCCGCTTCCATATGATGGAGACGGTCGCCATCGTCATCGGCATGGTCAGCACGCTGTTCTGGTGCCTCTATTATCCGCT CGGCTGGGCCGACTTCGCCGAGACGCGCTGGCTGCAACTCACTCTCGTGCACCACGGCTGCTTCTTCGCCGTCGGCGTGC TGCTGTGGCTGATGCGGTTCAAGGCGCTGACGGTCCCTCGCCTTGCCTTTTGCCTGCTGTTTCTCGGCGGCGGGGTTCTG CAGATCGCGAGTTCAGTCGACGTCCACAGCATCAAGGTCAATGCCGTGATGCCCTATGCGCCGCCGATCCTGATCTTCCT CGTCGCCATCGCGCTCATGGCGTGGTCGCTGCGGCTCGACCTCAGCTGGAGCGGCTGGCGCCGGATCGGCCTGATGACCT ATCCGCTCTACCTGATCCACGACGTCGTCGGCGCGGCGATGCTCGGAGCGATGGTCCGCGCCGGACTGCCTTATCTCCTG TCGATGGCAGTGGTCGGCGCGACCATGATCGCGGCAAGCTGGCTGGTGGCGACGGAAGCCGAGCCACGCATAAGGCTGTT GCTCGACCACACCGTTTTCCGCTATCGGCTCAAGGCGGCCTAG
Upstream 100 bases:
>100_bases TTGCGGGTTGGCCAATTCTGATCGGCAAGCAATACTTTTATTGTGCAATGCAGCAAGCCACCCTACAGTGTCTGCCGGGG GGCCATCCGACGGGTACGGT
Downstream 100 bases:
>100_bases CCGCCATCCAATGATGCTTCAGCGGCCTTCGCTGCCATCGTAGCGTGGTCCCATCGGACGAGCTCATCCAAAGCCGACGT CCTGGCGGCAAGCAGGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 359
Protein sequence:
>360_residues MAQQKITFGGVDILRFLAAVLVMVYHYGFWVWAYPDGISAQATGGVPAQADIGAWVGSGWVGVEIFFVISGFVIAFSAEK STPLRFFEARLKRLAPAVWICAPVTAVLLLAIGLSWPTDAVVRLVRTGLFVPYGPWVDSVYWTLGIEIAFYAIVWILLRL GRFHMMETVAIVIGMVSTLFWCLYYPLGWADFAETRWLQLTLVHHGCFFAVGVLLWLMRFKALTVPRLAFCLLFLGGGVL QIASSVDVHSIKVNAVMPYAPPILIFLVAIALMAWSLRLDLSWSGWRRIGLMTYPLYLIHDVVGAAMLGAMVRAGLPYLL SMAVVGATMIAASWLVATEAEPRIRLLLDHTVFRYRLKAA
Sequences:
>Translated_360_residues MAQQKITFGGVDILRFLAAVLVMVYHYGFWVWAYPDGISAQATGGVPAQADIGAWVGSGWVGVEIFFVISGFVIAFSAEK STPLRFFEARLKRLAPAVWICAPVTAVLLLAIGLSWPTDAVVRLVRTGLFVPYGPWVDSVYWTLGIEIAFYAIVWILLRL GRFHMMETVAIVIGMVSTLFWCLYYPLGWADFAETRWLQLTLVHHGCFFAVGVLLWLMRFKALTVPRLAFCLLFLGGGVL QIASSVDVHSIKVNAVMPYAPPILIFLVAIALMAWSLRLDLSWSGWRRIGLMTYPLYLIHDVVGAAMLGAMVRAGLPYLL SMAVVGATMIAASWLVATEAEPRIRLLLDHTVFRYRLKAA >Mature_359_residues AQQKITFGGVDILRFLAAVLVMVYHYGFWVWAYPDGISAQATGGVPAQADIGAWVGSGWVGVEIFFVISGFVIAFSAEKS TPLRFFEARLKRLAPAVWICAPVTAVLLLAIGLSWPTDAVVRLVRTGLFVPYGPWVDSVYWTLGIEIAFYAIVWILLRLG RFHMMETVAIVIGMVSTLFWCLYYPLGWADFAETRWLQLTLVHHGCFFAVGVLLWLMRFKALTVPRLAFCLLFLGGGVLQ IASSVDVHSIKVNAVMPYAPPILIFLVAIALMAWSLRLDLSWSGWRRIGLMTYPLYLIHDVVGAAMLGAMVRAGLPYLLS MAVVGATMIAASWLVATEAEPRIRLLLDHTVFRYRLKAA
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39949; Mature: 39818
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQQKITFGGVDILRFLAAVLVMVYHYGFWVWAYPDGISAQATGGVPAQADIGAWVGSGW CCCCEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCC VGVEIFFVISGFVIAFSAEKSTPLRFFEARLKRLAPAVWICAPVTAVLLLAIGLSWPTDA HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH VVRLVRTGLFVPYGPWVDSVYWTLGIEIAFYAIVWILLRLGRFHMMETVAIVIGMVSTLF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WCLYYPLGWADFAETRWLQLTLVHHGCFFAVGVLLWLMRFKALTVPRLAFCLLFLGGGVL HHHHHCCCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH QIASSVDVHSIKVNAVMPYAPPILIFLVAIALMAWSLRLDLSWSGWRRIGLMTYPLYLIH HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH DVVGAAMLGAMVRAGLPYLLSMAVVGATMIAASWLVATEAEPRIRLLLDHTVFRYRLKAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCC >Mature Secondary Structure AQQKITFGGVDILRFLAAVLVMVYHYGFWVWAYPDGISAQATGGVPAQADIGAWVGSGW CCCEEEECHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCC VGVEIFFVISGFVIAFSAEKSTPLRFFEARLKRLAPAVWICAPVTAVLLLAIGLSWPTDA HHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH VVRLVRTGLFVPYGPWVDSVYWTLGIEIAFYAIVWILLRLGRFHMMETVAIVIGMVSTLF HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WCLYYPLGWADFAETRWLQLTLVHHGCFFAVGVLLWLMRFKALTVPRLAFCLLFLGGGVL HHHHHCCCCHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHH QIASSVDVHSIKVNAVMPYAPPILIFLVAIALMAWSLRLDLSWSGWRRIGLMTYPLYLIH HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHH DVVGAAMLGAMVRAGLPYLLSMAVVGATMIAASWLVATEAEPRIRLLLDHTVFRYRLKAA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA