Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13474276

Identifier: 13474276

GI number: 13474276

Start: 4066937

End: 4067530

Strand: Reverse

Name: 13474276

Synonym: mll5129

Alternate gene names: NA

Gene position: 4067530-4066937 (Counterclockwise)

Preceding gene: 13474277

Following gene: 13474275

Centisome position: 57.81

GC content: 60.1

Gene sequence:

>594_bases
ATGACCGACGTTTCCCTGATCGACCGCCTGCTCGACGTCATCGAGCACGACATCGTGCCGAAGACCGCCGAAGGCGTTGC
TCACGGCAACAAGCTGTTCGGCGCGGCGATCCTAGGCAAGGACGACCGCTCGCTGGTGCTGGCCGAGACCAACAACGAGA
TCGAAAACCCGCTCTGGCATGGCGAGGTGCATTGCCTGAAACGGTTCTACGAAATGCCGAGGGCCGAGCGCGTCGACACC
AAGGACGCGCTGTTCATCGCCACGCATGAGCCCTGCTCACTCTGCCTGTCGGCGATCACCTGGACCGGCTTCGACAATTT
CTACTACCTGTTCAGCCACGAGGATTCGCGCGACAGTTTTGCCATCCCACACGACCTGAAAATCCTGAAAGAGGTCTTCA
CCCTCGACCCCGGCGGCTACAATGCCGAAAATGCCTATTGGAAGAGTTTTTCGATCCGCAGGATGGTGCGGGCGCTGCCC
GAGGCGGAACGCCTGCGGCTAGAGACACGCATAGGCAAGATCTCGGCACGCTACGATGAGTTGTCCGGCGCCTACCAGGC
GTGCAAGGCCGAAAACGACATTCCGCTCAACTGA

Upstream 100 bases:

>100_bases
ATTTCCTAATTGTCGACCGCGGCGGCGACGGCTCCAACCTCGAAGAATTCCATTTCTCGCACGCCTACGAGATCCATCTC
CCCTGAAAGCTTTGATCCCC

Downstream 100 bases:

>100_bases
GGGTGTGCCGCAGCTAGCAGTACAGGTCGCATAATTCGCTGCTCCAGTCGCGAATGGCGATTGAAACTTGCCGCGCCGCG
GGGCGTTATGCGCACCCATG

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxycytidylate Deaminase Family Protein; DCMP Deaminase

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MTDVSLIDRLLDVIEHDIVPKTAEGVAHGNKLFGAAILGKDDRSLVLAETNNEIENPLWHGEVHCLKRFYEMPRAERVDT
KDALFIATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSFAIPHDLKILKEVFTLDPGGYNAENAYWKSFSIRRMVRALP
EAERLRLETRIGKISARYDELSGAYQACKAENDIPLN

Sequences:

>Translated_197_residues
MTDVSLIDRLLDVIEHDIVPKTAEGVAHGNKLFGAAILGKDDRSLVLAETNNEIENPLWHGEVHCLKRFYEMPRAERVDT
KDALFIATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSFAIPHDLKILKEVFTLDPGGYNAENAYWKSFSIRRMVRALP
EAERLRLETRIGKISARYDELSGAYQACKAENDIPLN
>Mature_196_residues
TDVSLIDRLLDVIEHDIVPKTAEGVAHGNKLFGAAILGKDDRSLVLAETNNEIENPLWHGEVHCLKRFYEMPRAERVDTK
DALFIATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSFAIPHDLKILKEVFTLDPGGYNAENAYWKSFSIRRMVRALPE
AERLRLETRIGKISARYDELSGAYQACKAENDIPLN

Specific function: Unknown

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22433; Mature: 22301

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDVSLIDRLLDVIEHDIVPKTAEGVAHGNKLFGAAILGKDDRSLVLAETNNEIENPLWH
CCCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEHEEECCCCCEEEEEECCCCCCCCCCC
GEVHCLKRFYEMPRAERVDTKDALFIATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSF
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AIPHDLKILKEVFTLDPGGYNAENAYWKSFSIRRMVRALPEAERLRLETRIGKISARYDE
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSGAYQACKAENDIPLN
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TDVSLIDRLLDVIEHDIVPKTAEGVAHGNKLFGAAILGKDDRSLVLAETNNEIENPLWH
CCHHHHHHHHHHHHHCCCCCCHHHHHCCCHHEEHEEECCCCCEEEEEECCCCCCCCCCC
GEVHCLKRFYEMPRAERVDTKDALFIATHEPCSLCLSAITWTGFDNFYYLFSHEDSRDSF
HHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
AIPHDLKILKEVFTLDPGGYNAENAYWKSFSIRRMVRALPEAERLRLETRIGKISARYDE
CCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LSGAYQACKAENDIPLN
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA