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The map label for this gene is dppC [H]

Identifier: 13474272

GI number: 13474272

Start: 4061302

End: 4062126

Strand: Reverse

Name: dppC [H]

Synonym: mll5124

Alternate gene names: 13474272

Gene position: 4062126-4061302 (Counterclockwise)

Preceding gene: 13474273

Following gene: 13474271

Centisome position: 57.73

GC content: 63.64

Gene sequence:

>825_bases
ATGCTCGATATAAGACGCATCCCGATCCCGGCCCTGATCGGCCTGGTGCTGACCGCCCTGTTCGTGTTGGCGGCGATCTT
CGCACCATGGATTTCACCGCACGACAATGCCGAGATCGTCGGCGACGTCTGGGAACCAATGTCGGCCGCGCATTGGCTGG
GCACCGACAATCTCGGCCGCGATCTCTTGTCGCGCATGATCTACGGCGCCCGCATCACCTTGTTCATCGCCGTGCTGGCC
ACCGCGCTGTCCTTCTCGCTCGGCGCCATACTCGGTTTCTCGGCGGCGGTGTTCGGCGGCTGGTTCGACACGATCCTGTC
GCGCCTCGTCGACCTGCTAATGTCGATCCCGACCCTGATCATGGCCTTGGTCGTGCTCTCCGTGCTGCCGACAAACCTGG
TGACGCTGATCCTGGTCATGGGCGTTCTCGACTCGACCCGCGTCTATCGCCTGTCGCGTGCCGTCGCCGTCGACATCAAC
GTCATGGATTATGTCGAGGCGGCAAAACTGCGCGGCGAGGGCAGCGCCTGGATCATCTTCCGCGAGATCCTGCCCAATGC
GCTGTCGCCGCTGGTTTCGGAACTCGGCCTGCGCTTCATCTATGCGGTGCTTTTCCTGTCGACGCTGTCCTTTCTCGGCC
TTGGCGTGCAACCGCCGGACGCCGACTGGGGCGGCATGGTCAAGGAGAACAAGGACGGCATCGTCTTCGGCATCGCCGCC
GCACTCATTCCGGCGGGCGCGATCGCCGCGCTCGCCATCTCGGTCAATCTTGTCGCCGACTGGATCCTCAACCGCACGAC
AAGCCTGAAGGGAGGACGCGGGTGA

Upstream 100 bases:

>100_bases
CTGATCTTCGCCGCCGTCTATATCAGCCTCAACATCATCGCGGACATTGCGGCGATCGTCGCCAATCCGCGTCTCAGACA
CCCAAAGTGAGGGGGCGGGC

Downstream 100 bases:

>100_bases
TGGCCGACAGCAAAGCGAAGTCCGGCGTGCTGCTCGATATCAGGAATCTGCGCATCGAGGCGACGGTCTACCCGCCCGGC
GAGGCGCCAAAGAACATCGT

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MLDIRRIPIPALIGLVLTALFVLAAIFAPWISPHDNAEIVGDVWEPMSAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDTILSRLVDLLMSIPTLIMALVVLSVLPTNLVTLILVMGVLDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSAWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGGMVKENKDGIVFGIAA
ALIPAGAIAALAISVNLVADWILNRTTSLKGGRG

Sequences:

>Translated_274_residues
MLDIRRIPIPALIGLVLTALFVLAAIFAPWISPHDNAEIVGDVWEPMSAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDTILSRLVDLLMSIPTLIMALVVLSVLPTNLVTLILVMGVLDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSAWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGGMVKENKDGIVFGIAA
ALIPAGAIAALAISVNLVADWILNRTTSLKGGRG
>Mature_274_residues
MLDIRRIPIPALIGLVLTALFVLAAIFAPWISPHDNAEIVGDVWEPMSAAHWLGTDNLGRDLLSRMIYGARITLFIAVLA
TALSFSLGAILGFSAAVFGGWFDTILSRLVDLLMSIPTLIMALVVLSVLPTNLVTLILVMGVLDSTRVYRLSRAVAVDIN
VMDYVEAAKLRGEGSAWIIFREILPNALSPLVSELGLRFIYAVLFLSTLSFLGLGVQPPDADWGGMVKENKDGIVFGIAA
ALIPAGAIAALAISVNLVADWILNRTTSLKGGRG

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=259, Percent_Identity=33.976833976834, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1787054, Length=252, Percent_Identity=31.7460317460317, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI1789964, Length=213, Percent_Identity=40.8450704225352, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1787498, Length=263, Percent_Identity=30.7984790874525, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789889, Length=212, Percent_Identity=30.188679245283, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1787549, Length=257, Percent_Identity=29.5719844357977, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788505, Length=190, Percent_Identity=27.8947368421053, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29323; Mature: 29323

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]