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The map label for this gene is yliB [C]

Identifier: 13474270

GI number: 13474270

Start: 4057946

End: 4059535

Strand: Reverse

Name: yliB [C]

Synonym: mll5121

Alternate gene names: 13474270

Gene position: 4059535-4057946 (Counterclockwise)

Preceding gene: 13474271

Following gene: 13474269

Centisome position: 57.7

GC content: 63.4

Gene sequence:

>1590_bases
ATGAAGACGGAACTCGACCATCTCGCTGATCTCGCCGGCCAGGGCCGGATATCGCGTCGCGACTTCCTTGGCCGCACGGC
GGCATTGGGTGTGTCCGCGGCGCTGGCAACGACACTGGCCGGGAAAGCCTTCGCACAGACGCCGGTCAAGGGCGGCATCC
TCAAGGCCGGCCTGCAGGGCGGCGAGTCGACCAACAGCCTCGACCCCGCGCTGAACCTCAGCCAGGTCACCTACAGCTTC
GGCAAGCAGTGGGGCGAATATCTGGTCCGGCTGATGCCCGACAACAGCCTGACCAATATGATCGCGCAGGAGATCGGCGC
ATCAAAGGATGCCAAGACCTGGACGATCAAGGTGCGCGACGGCATCGAGTTCCACAATGGCAAGACCGTCACAGCGGAAG
ACATCGCCGCTACCATCGAGCGCCACGCCGACGAGAAGTCCAAATCCGGGGCGCTCGGCATCCTCAAGAACATCAAGGGC
GTCAAGGCAAGCGGCAAGGAAGTCGTCGTCACGCTCGGCGATGCCGACGCCGATTTCCCCTATCTGATGGCCGACTACCA
TCTCGTCATCCAGCCTAATGGTGGCAAGGACAACCCGAATGCCGGCATCAGCGCCGGTCCCTACAAGGTCACTGTCAACC
AGCCCGGCGTGCGCCATGGCGGCGAGCGCTTCGCCAACTACTGGCAAGGCGACAGACTAGGCCACGCCGACCAGATCGAG
ATCGTCGTCATCAATGACGCCACCGCGCGGCTTGCCGCGCTGCAGGGCGGCCAGGTGCACATGATCAACCGCGTCGAGCC
CAAGGTCGTCGACCTGGTCAAGCGCATTCCCGGCGTCAGCATCGAGAACGTGTCGGGCAAGGGCTACTACCCGTTCAACA
TGTTCTGCGACACCGCGCCCTTCGACAACAACGACCTGCGCATGGCGCTGAAACTCGCCATGGACCGCGAGGAGATGCTG
ACGAAGATCCTGCGCGGCTATGGCTCGGTCGGCAACGACTTCCCGATCAACGAAGCCTACCCGCTGTTTTCGACCGACAT
CGAACAACGCAAGTTCGACCCGGAGAAGGCGGCCGCTCTCTACAAGAAGTCGGGCCACAGCGGCCCGATCCTGCTGCGCA
CTTCCGACGTCGCCTTCCCCGGCGCCGTCGATGCCGCCCAACTCTATCAGCAGTCCTGCGCCAAGGCCGGCATCAAGATC
GAGATCAAGCGCGAGCCTGGCGACGGCTACTGGTCGGAAGTCTGGAACAAGCAGCCCTTCTCGCTCTCCTACTGGGGCGG
CCGCGCCACGCAGGACCAGATGTATTCCACCGGCTATGTCTCGACCGCCGACTGGAACGACACCCGCTTCAAGCGGCCGG
AATTCGACAAGATGCTGCTTGCGGCGCGCGGCGAGCTCGACCAGGCCAAGCGCAAGGCGATCTACCACGACATGGCGGTG
CTGATGCGCGACGAGGGCGGCCTGATCGTGCCGTTCTTCAACCAGTTCATCGACGCGGCCGCCACCAACAAGATCGGCGG
CTTTGCCAAGAGCCCGATCGGCGAGATGATGGATGGCTACGCGCTTGGTGAGTGCTGGCTCAACGCTTAG

Upstream 100 bases:

>100_bases
TCGGGGGCAGCTGTCTCGTCATCCAGATGCAACACGAAAGCGCCACACGTCCTTGCGGACGGGCGCTGCCCGTGACGTTG
TTTTCAACAAGGGGTAGGAC

Downstream 100 bases:

>100_bases
CCGGATCCTGCCTGTCTGATTCACGTGTAAAAACGCTGTGTGCCCGAAACGGCACACGGCGTTCCTGTTTCAACTGTCAA
ACCCGATGGAGCAGCCATGG

Product: ABC transporter, binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MKTELDHLADLAGQGRISRRDFLGRTAALGVSAALATTLAGKAFAQTPVKGGILKAGLQGGESTNSLDPALNLSQVTYSF
GKQWGEYLVRLMPDNSLTNMIAQEIGASKDAKTWTIKVRDGIEFHNGKTVTAEDIAATIERHADEKSKSGALGILKNIKG
VKASGKEVVVTLGDADADFPYLMADYHLVIQPNGGKDNPNAGISAGPYKVTVNQPGVRHGGERFANYWQGDRLGHADQIE
IVVINDATARLAALQGGQVHMINRVEPKVVDLVKRIPGVSIENVSGKGYYPFNMFCDTAPFDNNDLRMALKLAMDREEML
TKILRGYGSVGNDFPINEAYPLFSTDIEQRKFDPEKAAALYKKSGHSGPILLRTSDVAFPGAVDAAQLYQQSCAKAGIKI
EIKREPGDGYWSEVWNKQPFSLSYWGGRATQDQMYSTGYVSTADWNDTRFKRPEFDKMLLAARGELDQAKRKAIYHDMAV
LMRDEGGLIVPFFNQFIDAAATNKIGGFAKSPIGEMMDGYALGECWLNA

Sequences:

>Translated_529_residues
MKTELDHLADLAGQGRISRRDFLGRTAALGVSAALATTLAGKAFAQTPVKGGILKAGLQGGESTNSLDPALNLSQVTYSF
GKQWGEYLVRLMPDNSLTNMIAQEIGASKDAKTWTIKVRDGIEFHNGKTVTAEDIAATIERHADEKSKSGALGILKNIKG
VKASGKEVVVTLGDADADFPYLMADYHLVIQPNGGKDNPNAGISAGPYKVTVNQPGVRHGGERFANYWQGDRLGHADQIE
IVVINDATARLAALQGGQVHMINRVEPKVVDLVKRIPGVSIENVSGKGYYPFNMFCDTAPFDNNDLRMALKLAMDREEML
TKILRGYGSVGNDFPINEAYPLFSTDIEQRKFDPEKAAALYKKSGHSGPILLRTSDVAFPGAVDAAQLYQQSCAKAGIKI
EIKREPGDGYWSEVWNKQPFSLSYWGGRATQDQMYSTGYVSTADWNDTRFKRPEFDKMLLAARGELDQAKRKAIYHDMAV
LMRDEGGLIVPFFNQFIDAAATNKIGGFAKSPIGEMMDGYALGECWLNA
>Mature_529_residues
MKTELDHLADLAGQGRISRRDFLGRTAALGVSAALATTLAGKAFAQTPVKGGILKAGLQGGESTNSLDPALNLSQVTYSF
GKQWGEYLVRLMPDNSLTNMIAQEIGASKDAKTWTIKVRDGIEFHNGKTVTAEDIAATIERHADEKSKSGALGILKNIKG
VKASGKEVVVTLGDADADFPYLMADYHLVIQPNGGKDNPNAGISAGPYKVTVNQPGVRHGGERFANYWQGDRLGHADQIE
IVVINDATARLAALQGGQVHMINRVEPKVVDLVKRIPGVSIENVSGKGYYPFNMFCDTAPFDNNDLRMALKLAMDREEML
TKILRGYGSVGNDFPINEAYPLFSTDIEQRKFDPEKAAALYKKSGHSGPILLRTSDVAFPGAVDAAQLYQQSCAKAGIKI
EIKREPGDGYWSEVWNKQPFSLSYWGGRATQDQMYSTGYVSTADWNDTRFKRPEFDKMLLAARGELDQAKRKAIYHDMAV
LMRDEGGLIVPFFNQFIDAAATNKIGGFAKSPIGEMMDGYALGECWLNA

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=507, Percent_Identity=24.0631163708087, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789966, Length=466, Percent_Identity=21.6738197424893, Blast_Score=87, Evalue=2e-18,
Organism=Escherichia coli, GI1789887, Length=463, Percent_Identity=22.8941684665227, Blast_Score=76, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 57717; Mature: 57717

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTELDHLADLAGQGRISRRDFLGRTAALGVSAALATTLAGKAFAQTPVKGGILKAGLQG
CCCCHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCC
GESTNSLDPALNLSQVTYSFGKQWGEYLVRLMPDNSLTNMIAQEIGASKDAKTWTIKVRD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEC
GIEFHNGKTVTAEDIAATIERHADEKSKSGALGILKNIKGVKASGKEVVVTLGDADADFP
CEEECCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
YLMADYHLVIQPNGGKDNPNAGISAGPYKVTVNQPGVRHGGERFANYWQGDRLGHADQIE
EEEECEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEE
IVVINDATARLAALQGGQVHMINRVEPKVVDLVKRIPGVSIENVSGKGYYPFNMFCDTAP
EEEECCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCC
FDNNDLRMALKLAMDREEMLTKILRGYGSVGNDFPINEAYPLFSTDIEQRKFDPEKAAAL
CCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHH
YKKSGHSGPILLRTSDVAFPGAVDAAQLYQQSCAKAGIKIEIKREPGDGYWSEVWNKQPF
HHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCC
SLSYWGGRATQDQMYSTGYVSTADWNDTRFKRPEFDKMLLAARGELDQAKRKAIYHDMAV
EEEECCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LMRDEGGLIVPFFNQFIDAAATNKIGGFAKSPIGEMMDGYALGECWLNA
EEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECHHCCCC
>Mature Secondary Structure
MKTELDHLADLAGQGRISRRDFLGRTAALGVSAALATTLAGKAFAQTPVKGGILKAGLQG
CCCCHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHHHHHCHHHHCCCCCCCHHHHCCCC
GESTNSLDPALNLSQVTYSFGKQWGEYLVRLMPDNSLTNMIAQEIGASKDAKTWTIKVRD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCCCEEEEEEEC
GIEFHNGKTVTAEDIAATIERHADEKSKSGALGILKNIKGVKASGKEVVVTLGDADADFP
CEEECCCCEEEHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCCCC
YLMADYHLVIQPNGGKDNPNAGISAGPYKVTVNQPGVRHGGERFANYWQGDRLGHADQIE
EEEECEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCEEE
IVVINDATARLAALQGGQVHMINRVEPKVVDLVKRIPGVSIENVSGKGYYPFNMFCDTAP
EEEECCCCHHHHHCCCCCEEEEECCCHHHHHHHHHCCCCEEECCCCCCCCCCEEEECCCC
FDNNDLRMALKLAMDREEMLTKILRGYGSVGNDFPINEAYPLFSTDIEQRKFDPEKAAAL
CCCCCCEEHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHH
YKKSGHSGPILLRTSDVAFPGAVDAAQLYQQSCAKAGIKIEIKREPGDGYWSEVWNKQPF
HHHCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCCCCC
SLSYWGGRATQDQMYSTGYVSTADWNDTRFKRPEFDKMLLAARGELDQAKRKAIYHDMAV
EEEECCCCCCHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH
LMRDEGGLIVPFFNQFIDAAATNKIGGFAKSPIGEMMDGYALGECWLNA
EEECCCCEEEHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA