| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13474269
Identifier: 13474269
GI number: 13474269
Start: 4057010
End: 4057906
Strand: Reverse
Name: 13474269
Synonym: mll5120
Alternate gene names: NA
Gene position: 4057906-4057010 (Counterclockwise)
Preceding gene: 13474270
Following gene: 13474268
Centisome position: 57.67
GC content: 62.88
Gene sequence:
>897_bases GTGCCCGAAACGGCACACGGCGTTCCTGTTTCAACTGTCAAACCCGATGGAGCAGCCATGGCGCTCAAATCCAAGCTTCT GCTGATCATCCTCGACGGCGTTCCCTATCGCAACTGGCGCCGGCTGATGGGCAATCTCGAAGGCTGGGTGCAATCGGGCG AGGCGCGGGTCTGGAAGATGCGCTCGGTGCTGCCGTCGACATCGGCCTGCTGCTATGCCTCGATCCACACCGGCGTGTCG CCGCAGGTGCATGGCATTCTTTCCAACGAGAACCGCTTTCGCGTCGGGCAGCCCGATATCTTCTCCGAAGTCAGCAAGGC CGGCGGCAAGACCGGGGCGGTCACCCATTCCTACTGGTCGGAATTCTTCCGCTCCTACCCGTTCGACCTGGTCGAGGACA TGGAATATGACGAGCCGGGCGGGCCGATCACGCATGGCCGCTTCCACACCATGACCGGCTACAACGCGCGCAACCAGATG ACGCCGAGCGATGTCGATTTGTTCGCGACGCTGACCATGCTGACCAAACGCCACGGCATCGACTACGGCATCCTGCACAC CTGCACACTGGACTCGATGGGCCACCGCTTCGGCAATGACTGCCACGAGATGGACCATGCGGTCTATGCGATGGACGGCA TGCTGGCGGCCTTCCTGCCGGGCTGGATCGCAGCCGGCTACGAGGTGATGGTCACCGCCGACCATGGCCAGACCGACCGC GGCCACCATGGCGGCCATGATGACGAGATGCAGGATTTCGCGCTGTATTATTTCGGACAAGGCCAAGGGCCTGAAACCGA TACGCTGCTCGACCAGCTGCAGCTGGCGCCGACGGTGCTGAGCCGGCTCGGCGTGCCGGTGCCGGCGACGATGAAGGCGA AGCCGTTCTTGAGTTGA
Upstream 100 bases:
>100_bases GAGCCCGATCGGCGAGATGATGGATGGCTACGCGCTTGGTGAGTGCTGGCTCAACGCTTAGCCGGATCCTGCCTGTCTGA TTCACGTGTAAAAACGCTGT
Downstream 100 bases:
>100_bases GCGAGCCGCAGAGCCCTTTCCTTCCCCCCTTGTGGGGGAAGGAAAGGACCACACTGGCAACTGCCCCACTCTTCGTTTAG CCTCGCAAATTCCTTGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MPETAHGVPVSTVKPDGAAMALKSKLLLIILDGVPYRNWRRLMGNLEGWVQSGEARVWKMRSVLPSTSACCYASIHTGVS PQVHGILSNENRFRVGQPDIFSEVSKAGGKTGAVTHSYWSEFFRSYPFDLVEDMEYDEPGGPITHGRFHTMTGYNARNQM TPSDVDLFATLTMLTKRHGIDYGILHTCTLDSMGHRFGNDCHEMDHAVYAMDGMLAAFLPGWIAAGYEVMVTADHGQTDR GHHGGHDDEMQDFALYYFGQGQGPETDTLLDQLQLAPTVLSRLGVPVPATMKAKPFLS
Sequences:
>Translated_298_residues MPETAHGVPVSTVKPDGAAMALKSKLLLIILDGVPYRNWRRLMGNLEGWVQSGEARVWKMRSVLPSTSACCYASIHTGVS PQVHGILSNENRFRVGQPDIFSEVSKAGGKTGAVTHSYWSEFFRSYPFDLVEDMEYDEPGGPITHGRFHTMTGYNARNQM TPSDVDLFATLTMLTKRHGIDYGILHTCTLDSMGHRFGNDCHEMDHAVYAMDGMLAAFLPGWIAAGYEVMVTADHGQTDR GHHGGHDDEMQDFALYYFGQGQGPETDTLLDQLQLAPTVLSRLGVPVPATMKAKPFLS >Mature_297_residues PETAHGVPVSTVKPDGAAMALKSKLLLIILDGVPYRNWRRLMGNLEGWVQSGEARVWKMRSVLPSTSACCYASIHTGVSP QVHGILSNENRFRVGQPDIFSEVSKAGGKTGAVTHSYWSEFFRSYPFDLVEDMEYDEPGGPITHGRFHTMTGYNARNQMT PSDVDLFATLTMLTKRHGIDYGILHTCTLDSMGHRFGNDCHEMDHAVYAMDGMLAAFLPGWIAAGYEVMVTADHGQTDRG HHGGHDDEMQDFALYYFGQGQGPETDTLLDQLQLAPTVLSRLGVPVPATMKAKPFLS
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32853; Mature: 32721
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETAHGVPVSTVKPDGAAMALKSKLLLIILDGVPYRNWRRLMGNLEGWVQSGEARVWKM CCCCCCCCCCEEECCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHH RSVLPSTSACCYASIHTGVSPQVHGILSNENRFRVGQPDIFSEVSKAGGKTGAVTHSYWS HHHCCCCCCEEEEEHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCCCCCEEHHHHH EFFRSYPFDLVEDMEYDEPGGPITHGRFHTMTGYNARNQMTPSDVDLFATLTMLTKRHGI HHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC DYGILHTCTLDSMGHRFGNDCHEMDHAVYAMDGMLAAFLPGWIAAGYEVMVTADHGQTDR CCCHHEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC GHHGGHDDEMQDFALYYFGQGQGPETDTLLDQLQLAPTVLSRLGVPVPATMKAKPFLS CCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PETAHGVPVSTVKPDGAAMALKSKLLLIILDGVPYRNWRRLMGNLEGWVQSGEARVWKM CCCCCCCCCEEECCCCHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHH RSVLPSTSACCYASIHTGVSPQVHGILSNENRFRVGQPDIFSEVSKAGGKTGAVTHSYWS HHHCCCCCCEEEEEHHCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCCCCCEEHHHHH EFFRSYPFDLVEDMEYDEPGGPITHGRFHTMTGYNARNQMTPSDVDLFATLTMLTKRHGI HHHHHCCHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC DYGILHTCTLDSMGHRFGNDCHEMDHAVYAMDGMLAAFLPGWIAAGYEVMVTADHGQTDR CCCHHEEECHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC GHHGGHDDEMQDFALYYFGQGQGPETDTLLDQLQLAPTVLSRLGVPVPATMKAKPFLS CCCCCCCCCHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA