Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13474247

Identifier: 13474247

GI number: 13474247

Start: 4035498

End: 4035959

Strand: Reverse

Name: 13474247

Synonym: mll5093

Alternate gene names: NA

Gene position: 4035959-4035498 (Counterclockwise)

Preceding gene: 13474248

Following gene: 13474246

Centisome position: 57.36

GC content: 68.61

Gene sequence:

>462_bases
GTGCCTGATCCAGTTGCGCAGCCAGAAAACATTCACGGAACCGCGATCCTGATCGGCGAGCGCGGCGTCCTTATCACCGG
GCCGTCCGGCGCCGGCAAAACGACGCTGGCGCTGACACTCCTGGACCATTGCCGCGCGCGCGGGCTGTTCTCGCGGCTGA
TCGGCGACGACAGGCTGCTTGCCGCGGCCCGCGCCGGGCGGCTGGTCTGTCGCGTGCCGGCGCCTATCGCCGGTCTCGCC
GAAGTGCCTGGATTCATGCCGCGCCGGCTGCCGTTCGAGCCGGCCGGGGTGATCGACCTGCATGTGAGGCTGGTGCCAAA
GGCAGAGATGGCCCGTTTCCAGGAGGAAATCAGCGAGCCGGTCGCAGGCTGCCCGGTGCCGCGTATCGACCTTGCTGAGC
GTAACGCCGCCACGGCCCTGCCCGCCGTGATGGCGCGGCTGTCCATCACGCCTTTTCTATGA

Upstream 100 bases:

>100_bases
GACGCTGCCGGCCGAAGCATGATCCCACGAAGCGGAGGCCGGTTTCTCGGACGAACGGTGCCGTTCGTCCAGAGATCATG
CTTCAGCCAAAGATATAATC

Downstream 100 bases:

>100_bases
TCCGCCCGAGATTTTTTGCTGCAATGCGTCAAATTGGCATGGGCCGGCGCAATTTTGGGCTTGTCAACGGGCCGCGCGTC
GACAAGATAGCGCTCCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MPDPVAQPENIHGTAILIGERGVLITGPSGAGKTTLALTLLDHCRARGLFSRLIGDDRLLAAARAGRLVCRVPAPIAGLA
EVPGFMPRRLPFEPAGVIDLHVRLVPKAEMARFQEEISEPVAGCPVPRIDLAERNAATALPAVMARLSITPFL

Sequences:

>Translated_153_residues
MPDPVAQPENIHGTAILIGERGVLITGPSGAGKTTLALTLLDHCRARGLFSRLIGDDRLLAAARAGRLVCRVPAPIAGLA
EVPGFMPRRLPFEPAGVIDLHVRLVPKAEMARFQEEISEPVAGCPVPRIDLAERNAATALPAVMARLSITPFL
>Mature_152_residues
PDPVAQPENIHGTAILIGERGVLITGPSGAGKTTLALTLLDHCRARGLFSRLIGDDRLLAAARAGRLVCRVPAPIAGLAE
VPGFMPRRLPFEPAGVIDLHVRLVPKAEMARFQEEISEPVAGCPVPRIDLAERNAATALPAVMARLSITPFL

Specific function: Unknown

COG id: COG1493

COG function: function code T; Serine kinase of the HPr protein, regulates carbohydrate metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16223; Mature: 16092

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDPVAQPENIHGTAILIGERGVLITGPSGAGKTTLALTLLDHCRARGLFSRLIGDDRLL
CCCCCCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAARAGRLVCRVPAPIAGLAEVPGFMPRRLPFEPAGVIDLHVRLVPKAEMARFQEEISEP
HHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
VAGCPVPRIDLAERNAATALPAVMARLSITPFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PDPVAQPENIHGTAILIGERGVLITGPSGAGKTTLALTLLDHCRARGLFSRLIGDDRLL
CCCCCCCCCCCCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHH
AAARAGRLVCRVPAPIAGLAEVPGFMPRRLPFEPAGVIDLHVRLVPKAEMARFQEEISEP
HHHHCCEEEEECCCCCCCHHHCCCCCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
VAGCPVPRIDLAERNAATALPAVMARLSITPFL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA