| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yjeE [H]
Identifier: 13474242
GI number: 13474242
Start: 4028788
End: 4030299
Strand: Reverse
Name: yjeE [H]
Synonym: mll5086
Alternate gene names: 13474242
Gene position: 4030299-4028788 (Counterclockwise)
Preceding gene: 13474243
Following gene: 13474241
Centisome position: 57.28
GC content: 65.48
Gene sequence:
>1512_bases ATGACGGGACCTGTACTGGAGCATTTGCTCGCGGATGAGACACAGACAGCGCGACTGGGCGAAGATCTGGCGTTGTCCCT GCGCGCCGGCGACGTGCTGGCGCTCAAGGGCGATCTCGGCGCCGGCAAATCGACATTGGCGCGGGCGCTGATCCGCGCGC TGGCTGACGATGCCGGCCTCGATGTGCCGAGCCCGACCTTCACCCTGGTGCAGAGCTACGACACGCGCATTCCGGTCCAT CATTTCGACCTTTATCGCCTGTCCTCGGCAAGCGAGCTCGACGAACTCGGCTTCGACGAAGCGCTGACGCAAGGCGCTGC CCTCGTCGAATGGCCCGACCGGGCGGAAGGCTATCTGCCGAAGACAACGCTCTCGATCGAACTCGTCCAGCATGGCGAGG GCCGGCTGGCGCGGCTGTCGGGGCAAGGCGCTGCCTTCGACCGCGCGGCGCGATCGCTGGCCATGCGCGGTTTTCTCGAA AATGCCGGCTGGGGCGAAGCGCGGCGGCGCCATTTCATCGGCGACGCCTCGGCCCGCTCCTACGAGATCGTCACGCTTGC CGGCCGGGAGCCGCGCGTGCTGATGAACTCACCGCGTCTGGTGCTAGGCCCGCCCGTGCGTGACGGCAAACCCTATGCCG TGATCGCCCACACCGCGCAGTCGGTCTCCGCCTTCGTCGCCATCGACCGCGCCTTGAAGGCCGGCGGCGTCAGCGTCCCG CAAATCCATGCCGAGGACCAGGACCAGGGTTTTTTGCTGCTCGAACATCTCGGTTCCGAAGGGTTTCTCGGCAAGAACGG CGAGCCGGTGGCCGAGCGCTATGCGGCGGCGGCCGAGCTGCTGGCCATGATGCATGGCAAGAGCTGGCCGCGGCGGCTGC AAGCCGGACCCGGCAGCTTCCACGAGGTGCCGCCTTTCGACCGCGATGCGATGATGATCGAAGCCGATCTTTTGGTCGAC TGGTACGTGCCGGCGATATCGGGCGGCCCGGCCAGCGACGATCTGCGCTTGGGCTACGCCACGGAATGGAACGCGCTTTT CGACCGGCTGCAGGGCAGCGAATACACGCTGATGCTGCGCGACTTCCATTCGCCCAACATCATCTGGCGCGACGACCACG CCGGCCATGACCGGCTGGGCATCGTCGACTTCCAGGATGCGCTAATCGGGCCTTCAGCCTATGACGTCGCCTCGCTGGCC ATGGACGCCCGCGTCACCATCTCGCCGGAGATCGAGAAGAAAACGCTCGATGCCTATGTCGCGGCGCGCCATGCGGCAGG CGCCTTCGACGAAGCAAGCTTCCTGGAAGCCTATGCAATCATGGCGGCGCAGCGCAACTCCAAGATCCTCGGCATTTTCG TGCGTCTCGAAAAACGCGACGGCAAACCTTATTATTTGAAGCACCTGCCGCGCATCCGCGACTATCTGCGCCGGGCGCTG TCCCACCCGGCGCTTGCCAGCCTGCGGGATTTCTACGAAGCGCACGGGCTGCTTGAGGAACGAACGCTGTGA
Upstream 100 bases:
>100_bases GCAATGTTCGCATCGAAACCGGCAAGGACAAGGGCACGACCGTCATCTGCACCTTCCCCGACATGCCGGGCATCCGCGCC GCGGCCGAGTAGCGCGCTCT
Downstream 100 bases:
>100_bases CAGCAAGACCGGACACTGCCATCGTCCTTGCCGCCGGGCTCGGCAAGCGCATGCGGCCGATCACCGACACGATCCCGAAG CCGCTGGTCAGGATCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 503; Mature: 502
Protein sequence:
>503_residues MTGPVLEHLLADETQTARLGEDLALSLRAGDVLALKGDLGAGKSTLARALIRALADDAGLDVPSPTFTLVQSYDTRIPVH HFDLYRLSSASELDELGFDEALTQGAALVEWPDRAEGYLPKTTLSIELVQHGEGRLARLSGQGAAFDRAARSLAMRGFLE NAGWGEARRRHFIGDASARSYEIVTLAGREPRVLMNSPRLVLGPPVRDGKPYAVIAHTAQSVSAFVAIDRALKAGGVSVP QIHAEDQDQGFLLLEHLGSEGFLGKNGEPVAERYAAAAELLAMMHGKSWPRRLQAGPGSFHEVPPFDRDAMMIEADLLVD WYVPAISGGPASDDLRLGYATEWNALFDRLQGSEYTLMLRDFHSPNIIWRDDHAGHDRLGIVDFQDALIGPSAYDVASLA MDARVTISPEIEKKTLDAYVAARHAAGAFDEASFLEAYAIMAAQRNSKILGIFVRLEKRDGKPYYLKHLPRIRDYLRRAL SHPALASLRDFYEAHGLLEERTL
Sequences:
>Translated_503_residues MTGPVLEHLLADETQTARLGEDLALSLRAGDVLALKGDLGAGKSTLARALIRALADDAGLDVPSPTFTLVQSYDTRIPVH HFDLYRLSSASELDELGFDEALTQGAALVEWPDRAEGYLPKTTLSIELVQHGEGRLARLSGQGAAFDRAARSLAMRGFLE NAGWGEARRRHFIGDASARSYEIVTLAGREPRVLMNSPRLVLGPPVRDGKPYAVIAHTAQSVSAFVAIDRALKAGGVSVP QIHAEDQDQGFLLLEHLGSEGFLGKNGEPVAERYAAAAELLAMMHGKSWPRRLQAGPGSFHEVPPFDRDAMMIEADLLVD WYVPAISGGPASDDLRLGYATEWNALFDRLQGSEYTLMLRDFHSPNIIWRDDHAGHDRLGIVDFQDALIGPSAYDVASLA MDARVTISPEIEKKTLDAYVAARHAAGAFDEASFLEAYAIMAAQRNSKILGIFVRLEKRDGKPYYLKHLPRIRDYLRRAL SHPALASLRDFYEAHGLLEERTL >Mature_502_residues TGPVLEHLLADETQTARLGEDLALSLRAGDVLALKGDLGAGKSTLARALIRALADDAGLDVPSPTFTLVQSYDTRIPVHH FDLYRLSSASELDELGFDEALTQGAALVEWPDRAEGYLPKTTLSIELVQHGEGRLARLSGQGAAFDRAARSLAMRGFLEN AGWGEARRRHFIGDASARSYEIVTLAGREPRVLMNSPRLVLGPPVRDGKPYAVIAHTAQSVSAFVAIDRALKAGGVSVPQ IHAEDQDQGFLLLEHLGSEGFLGKNGEPVAERYAAAAELLAMMHGKSWPRRLQAGPGSFHEVPPFDRDAMMIEADLLVDW YVPAISGGPASDDLRLGYATEWNALFDRLQGSEYTLMLRDFHSPNIIWRDDHAGHDRLGIVDFQDALIGPSAYDVASLAM DARVTISPEIEKKTLDAYVAARHAAGAFDEASFLEAYAIMAAQRNSKILGIFVRLEKRDGKPYYLKHLPRIRDYLRRALS HPALASLRDFYEAHGLLEERTL
Specific function: Unknown
COG id: COG3178
COG function: function code R; Predicted phosphotransferase related to Ser/Thr protein kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=138, Percent_Identity=40.5797101449275, Blast_Score=95, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 55121; Mature: 54990
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGPVLEHLLADETQTARLGEDLALSLRAGDVLALKGDLGAGKSTLARALIRALADDAGL CCCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC DVPSPTFTLVQSYDTRIPVHHFDLYRLSSASELDELGFDEALTQGAALVEWPDRAEGYLP CCCCCHHHHHHHCCCCCCEEEEHHEECCCHHHHHHCCHHHHHHCCCEEEECCCCCCCCCC KTTLSIELVQHGEGRLARLSGQGAAFDRAARSLAMRGFLENAGWGEARRRHFIGDASARS CCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC YEIVTLAGREPRVLMNSPRLVLGPPVRDGKPYAVIAHTAQSVSAFVAIDRALKAGGVSVP EEEEEECCCCCEEEECCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCC QIHAEDQDQGFLLLEHLGSEGFLGKNGEPVAERYAAAAELLAMMHGKSWPRRLQAGPGSF EECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC HEVPPFDRDAMMIEADLLVDWYVPAISGGPASDDLRLGYATEWNALFDRLQGSEYTLMLR CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEE DFHSPNIIWRDDHAGHDRLGIVDFQDALIGPSAYDVASLAMDARVTISPEIEKKTLDAYV ECCCCCEEECCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHH AARHAAGAFDEASFLEAYAIMAAQRNSKILGIFVRLEKRDGKPYYLKHLPRIRDYLRRAL HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHCHHHHHHHHHHH SHPALASLRDFYEAHGLLEERTL CCCHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TGPVLEHLLADETQTARLGEDLALSLRAGDVLALKGDLGAGKSTLARALIRALADDAGL CCHHHHHHHCCCCHHHHCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCCC DVPSPTFTLVQSYDTRIPVHHFDLYRLSSASELDELGFDEALTQGAALVEWPDRAEGYLP CCCCCHHHHHHHCCCCCCEEEEHHEECCCHHHHHHCCHHHHHHCCCEEEECCCCCCCCCC KTTLSIELVQHGEGRLARLSGQGAAFDRAARSLAMRGFLENAGWGEARRRHFIGDASARS CCEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCC YEIVTLAGREPRVLMNSPRLVLGPPVRDGKPYAVIAHTAQSVSAFVAIDRALKAGGVSVP EEEEEECCCCCEEEECCCCEEECCCCCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCC QIHAEDQDQGFLLLEHLGSEGFLGKNGEPVAERYAAAAELLAMMHGKSWPRRLQAGPGSF EECCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC HEVPPFDRDAMMIEADLLVDWYVPAISGGPASDDLRLGYATEWNALFDRLQGSEYTLMLR CCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCEEEEEE DFHSPNIIWRDDHAGHDRLGIVDFQDALIGPSAYDVASLAMDARVTISPEIEKKTLDAYV ECCCCCEEECCCCCCCCCEEEEEHHHHHCCCCHHHHHHHHHCCEEEECCCHHHHHHHHHH AARHAAGAFDEASFLEAYAIMAAQRNSKILGIFVRLEKRDGKPYYLKHLPRIRDYLRRAL HHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHCHHHHHHHHHHH SHPALASLRDFYEAHGLLEERTL CCCHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]