| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13473807
Identifier: 13473807
GI number: 13473807
Start: 3597700
End: 3600288
Strand: Reverse
Name: 13473807
Synonym: mll4526
Alternate gene names: NA
Gene position: 3600288-3597700 (Counterclockwise)
Preceding gene: 13473810
Following gene: 13473804
Centisome position: 51.17
GC content: 67.05
Gene sequence:
>2589_bases ATGCTTCTGGAACGGCAGACACAGCTGGCGCAGCTGGATGAGCTTCTCGCAGAGGCCGCGAATGGACGCGGCCGCGTGGT GGCGCTATCGGGCGAGGCAGGCGCCGGCAAGTCGGCGCTTGTCGAGGCTTTCGTCGGCGGAGTTGCCGATGGCACGCGCA TCTTCCGCAGCGCCTGCGAGGATTTGTCGATCCCCGATCCGCTTGGCCCGCTCTACGATCTTGCCCGCGAGGCGCAATGG GCCATGCCGCAGGCGATCGACGCGCGGCAGGGGCAGAGGGTGCCGCTGTTTTCCGACGCGCTGGGAGTCTTCGAGGCAAG GACCCAGCCAACGCTCCTGGTAATCGAGGACCTGCACTGGGCCGACGACGCGACACTGGATTTCGTTCGCTTCCTCGGGC GCCGCATCGCCAACACCCACATCCTGCTCGCTCTGACGGCGCGCACCGACCGCAGCGAAGGGCAGATGCGCGTGCGCCGC GCGCTCGGCGAAATTCCCGCCGGCAACGTCGTGCGCATCGATGTGCCGCTGCTGAGCGAGGCGGCGGTGCTTTTGCTTGC CAATGCCGCCGGCCGTGATGGCGATGCCATCTACCGCGCGACGGCGGGCAATGCTTTCTTCGTCACCGAGCTTTTGTGCG CGGACAATGAGATGACGCCACCTGCCAGCGTGCGCGACGCCGTCGTCGCACGGGCCGAACGGCTGTCGGCCGGCGCCCGC TCGATGCTCGATGCAGTTTCGGTCTTTCCCAGACGCGCCGACGCGTGGGCCTTGCAGGGCCTGTGCGGCGTCGCAGCTGC CGGCCAGCTCGCGGAATGTGTGTCGAACGGCCTGCTCGACGATCTCGGCGACGGCTACGCCTTCCGACATGAGATCGCGC GCCGCGCCATCGAGATGATGCTGACGACGAGTTCCAGGAGATTGTTCAATCAGCGTGCGCTGTCGGCGCTGCTCGAGAAT GGCGGTGTCGCCACTGCGCGCCTCGTCCACCATGCGGTCGAGGCGCACAATCTGCAGGCGGTGCGTGAGTTCGCACCGAT TGCGGCGCGGGAGGCCTCGCGCGTCGGCGCCCATCGCGACGCCGCCGGCTACTACGAGGTTGCCCTGCGGCAGGCAGACA CCTTGCCTCAAGATGAGCGCGCCGGCCTTTACGAGCACTATGCGTTCGAGTGCCATTTGATCGCTCGCATAGACGAAGCC ATCAAGGCACAGGAACGGGCACGTGAGTTGCAACAGGCGCTTGGCAACAGGCTGAAGGAAGGCGACAGCCTCAGATGGCT GTCGCGCTTCGCCTATCTTCTGGGGGACCGACGGGCAGCAGACATGTTCGGCGCCCAGGCGGTCGCATTGCTGGAAACCG TTCCGGCCAGCGCCGAACTCGCCATGGCCTATTCGAATCTTTCGCAGCTTGCGATGCTGGCTGAAAGGCTGGACGAGACT TTGTCGCTCGGCGCCAGGGCGATCGAACTCGCCGAACGGTTGAACAGGCCGGAAGTCGTTTGCCATGCTCTCAACAATGT CGGCGCCGCCGAGCAGTGGCTGGACCTCGGCAGCAGCAGGCTGCATCTTGCCCGCAGCCTCGAGATCGCGCTCGAACAGA ATTTTCAGGAACATGCCGCGCGCGCCTTCACCAACTGCGCTTGTGGCGAGATGAACCAGTTGGGCTACAGCCAGGCCCAA TCCTTCCTTGATCGCGGCATCGACTATTGCGTCGAGAACGATCTGGCGACCTGGCGCGATTACATGCGTGGCGTGCGGGC CCAGTTGTTGGTGCGCAACGGACTCTGGGATGACGCGGCTGCCGAGGCGCTGGATGTGATTGCCAACGACCGGGCGACGG CGCTGGTGCGCTATCCCGCCCTCGTAGCGCTGTCGCGGCTGAGGGTCCGCCGCGGCGACCCCTCGGCAGAGCCGCTCCTG GCGGAGATGAAGCGGTTTCTGGAGAAGGGCGCCGAACTGCAGCGGCTGTTACCTTACGCGGCTGTGATGGCCGAACTGGC CTGGCTTGGGGAGGCGGACAAGGACGAGGCGCTGCGGCTGATCGACCTTGCCGAGGGCATGTCGCCGACCCGGGCGGTCT TCGCCGAACTGGCAAGCTGGCGGCAGATGCTGGCACCCGATGCAGATCCGGGCGACACATCCGCCATGGCCGCGCCCTAC CGGATGCTCCTGGCCGGCGACTGGCGGGCGGCGGCCGCGGCGTGGGCCGAACTCGACGCGCCTTACGAACGCGCCCTGGC GCTCGCGCAGGGCGATGAGGCGGCACAGCGGGCGGCGCTGGAGGTCCTTGAGCAGCTCGGCGCCCGGCCGGTCGCGAGCC ATGTGCGCGACATCATGCGTCGAAACGGCGTCATCCGCATCGCGCGTGGACCACGCCGCACCACGCGCGCCAACAGCGCC GGCCTGACCCAGCGCCAGATGGAAGTGCTGCAGCTGATCGAGCGGGGTCTCTCCAACAAGCGCATAGCCGAGCATCTCGC CATTTCGCCCAAGACGGTCGATCACCACGTCTCGGCGGTGCTGGGCAAACTGGATGCCGTCTCACGCGGCGAGGCCTCCG CTGCCGCGCGCGCCAGCGGGCTGATCTGA
Upstream 100 bases:
>100_bases CGAAATGTGTGGAGGGTCACATTGTCGGTCATGGTCCTCGACGTTTCTGGCGGGCGTCGAGGGAACCGCCGAAAACACAA TCCTTTCTGGGCGTATGATG
Downstream 100 bases:
>100_bases AGCCAAAGGGCGAGTTCGAACCGCTCCGGCTCAATCATACGTCAGATCCGTCGCCTTACCGCCGAACACGCGATAGGCAT AGAAGGAATAGAAGATGATG
Product: transcriptional regulatory
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; ATPase-Like Protein; Regulatory Protein LuxR; LuxR-Family Transcriptional Regulator; Transcriptional Activator Domain-Containing Protein; Transcriptional Regulator; Adenylyl Cyclase Class-3/4/Guanylyl Cyclase; Adenylate/Guanylate Cyclase; Bacterial Transcriptional Activator Domain Family; Adenylate/Guanylate Cyclase Protein; Winged Helix Family Transcriptional Regulator ATPase; Transcriptional Regulatory; Serine/Threonine Protein Kinase; LuxR Family Regulator
Number of amino acids: Translated: 862; Mature: 862
Protein sequence:
>862_residues MLLERQTQLAQLDELLAEAANGRGRVVALSGEAGAGKSALVEAFVGGVADGTRIFRSACEDLSIPDPLGPLYDLAREAQW AMPQAIDARQGQRVPLFSDALGVFEARTQPTLLVIEDLHWADDATLDFVRFLGRRIANTHILLALTARTDRSEGQMRVRR ALGEIPAGNVVRIDVPLLSEAAVLLLANAAGRDGDAIYRATAGNAFFVTELLCADNEMTPPASVRDAVVARAERLSAGAR SMLDAVSVFPRRADAWALQGLCGVAAAGQLAECVSNGLLDDLGDGYAFRHEIARRAIEMMLTTSSRRLFNQRALSALLEN GGVATARLVHHAVEAHNLQAVREFAPIAAREASRVGAHRDAAGYYEVALRQADTLPQDERAGLYEHYAFECHLIARIDEA IKAQERARELQQALGNRLKEGDSLRWLSRFAYLLGDRRAADMFGAQAVALLETVPASAELAMAYSNLSQLAMLAERLDET LSLGARAIELAERLNRPEVVCHALNNVGAAEQWLDLGSSRLHLARSLEIALEQNFQEHAARAFTNCACGEMNQLGYSQAQ SFLDRGIDYCVENDLATWRDYMRGVRAQLLVRNGLWDDAAAEALDVIANDRATALVRYPALVALSRLRVRRGDPSAEPLL AEMKRFLEKGAELQRLLPYAAVMAELAWLGEADKDEALRLIDLAEGMSPTRAVFAELASWRQMLAPDADPGDTSAMAAPY RMLLAGDWRAAAAAWAELDAPYERALALAQGDEAAQRAALEVLEQLGARPVASHVRDIMRRNGVIRIARGPRRTTRANSA GLTQRQMEVLQLIERGLSNKRIAEHLAISPKTVDHHVSAVLGKLDAVSRGEASAAARASGLI
Sequences:
>Translated_862_residues MLLERQTQLAQLDELLAEAANGRGRVVALSGEAGAGKSALVEAFVGGVADGTRIFRSACEDLSIPDPLGPLYDLAREAQW AMPQAIDARQGQRVPLFSDALGVFEARTQPTLLVIEDLHWADDATLDFVRFLGRRIANTHILLALTARTDRSEGQMRVRR ALGEIPAGNVVRIDVPLLSEAAVLLLANAAGRDGDAIYRATAGNAFFVTELLCADNEMTPPASVRDAVVARAERLSAGAR SMLDAVSVFPRRADAWALQGLCGVAAAGQLAECVSNGLLDDLGDGYAFRHEIARRAIEMMLTTSSRRLFNQRALSALLEN GGVATARLVHHAVEAHNLQAVREFAPIAAREASRVGAHRDAAGYYEVALRQADTLPQDERAGLYEHYAFECHLIARIDEA IKAQERARELQQALGNRLKEGDSLRWLSRFAYLLGDRRAADMFGAQAVALLETVPASAELAMAYSNLSQLAMLAERLDET LSLGARAIELAERLNRPEVVCHALNNVGAAEQWLDLGSSRLHLARSLEIALEQNFQEHAARAFTNCACGEMNQLGYSQAQ SFLDRGIDYCVENDLATWRDYMRGVRAQLLVRNGLWDDAAAEALDVIANDRATALVRYPALVALSRLRVRRGDPSAEPLL AEMKRFLEKGAELQRLLPYAAVMAELAWLGEADKDEALRLIDLAEGMSPTRAVFAELASWRQMLAPDADPGDTSAMAAPY RMLLAGDWRAAAAAWAELDAPYERALALAQGDEAAQRAALEVLEQLGARPVASHVRDIMRRNGVIRIARGPRRTTRANSA GLTQRQMEVLQLIERGLSNKRIAEHLAISPKTVDHHVSAVLGKLDAVSRGEASAAARASGLI >Mature_862_residues MLLERQTQLAQLDELLAEAANGRGRVVALSGEAGAGKSALVEAFVGGVADGTRIFRSACEDLSIPDPLGPLYDLAREAQW AMPQAIDARQGQRVPLFSDALGVFEARTQPTLLVIEDLHWADDATLDFVRFLGRRIANTHILLALTARTDRSEGQMRVRR ALGEIPAGNVVRIDVPLLSEAAVLLLANAAGRDGDAIYRATAGNAFFVTELLCADNEMTPPASVRDAVVARAERLSAGAR SMLDAVSVFPRRADAWALQGLCGVAAAGQLAECVSNGLLDDLGDGYAFRHEIARRAIEMMLTTSSRRLFNQRALSALLEN GGVATARLVHHAVEAHNLQAVREFAPIAAREASRVGAHRDAAGYYEVALRQADTLPQDERAGLYEHYAFECHLIARIDEA IKAQERARELQQALGNRLKEGDSLRWLSRFAYLLGDRRAADMFGAQAVALLETVPASAELAMAYSNLSQLAMLAERLDET LSLGARAIELAERLNRPEVVCHALNNVGAAEQWLDLGSSRLHLARSLEIALEQNFQEHAARAFTNCACGEMNQLGYSQAQ SFLDRGIDYCVENDLATWRDYMRGVRAQLLVRNGLWDDAAAEALDVIANDRATALVRYPALVALSRLRVRRGDPSAEPLL AEMKRFLEKGAELQRLLPYAAVMAELAWLGEADKDEALRLIDLAEGMSPTRAVFAELASWRQMLAPDADPGDTSAMAAPY RMLLAGDWRAAAAAWAELDAPYERALALAQGDEAAQRAALEVLEQLGARPVASHVRDIMRRNGVIRIARGPRRTTRANSA GLTQRQMEVLQLIERGLSNKRIAEHLAISPKTVDHHVSAVLGKLDAVSRGEASAAARASGLI
Specific function: Unknown
COG id: COG3899
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 93707; Mature: 93707
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLERQTQLAQLDELLAEAANGRGRVVALSGEAGAGKSALVEAFVGGVADGTRIFRSACE CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH DLSIPDPLGPLYDLAREAQWAMPQAIDARQGQRVPLFSDALGVFEARTQPTLLVIEDLHW CCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC ADDATLDFVRFLGRRIANTHILLALTARTDRSEGQMRVRRALGEIPAGNVVRIDVPLLSE CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHH AAVLLLANAAGRDGDAIYRATAGNAFFVTELLCADNEMTPPASVRDAVVARAERLSAGAR HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH SMLDAVSVFPRRADAWALQGLCGVAAAGQLAECVSNGLLDDLGDGYAFRHEIARRAIEMM HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH LTTSSRRLFNQRALSALLENGGVATARLVHHAVEAHNLQAVREFAPIAAREASRVGAHRD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAGYYEVALRQADTLPQDERAGLYEHYAFECHLIARIDEAIKAQERARELQQALGNRLKE CCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDSLRWLSRFAYLLGDRRAADMFGAQAVALLETVPASAELAMAYSNLSQLAMLAERLDET CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LSLGARAIELAERLNRPEVVCHALNNVGAAEQWLDLGSSRLHLARSLEIALEQNFQEHAA HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAFTNCACGEMNQLGYSQAQSFLDRGIDYCVENDLATWRDYMRGVRAQLLVRNGLWDDAA HHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHH AEALDVIANDRATALVRYPALVALSRLRVRRGDPSAEPLLAEMKRFLEKGAELQRLLPYA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AVMAELAWLGEADKDEALRLIDLAEGMSPTRAVFAELASWRQMLAPDADPGDTSAMAAPY HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RMLLAGDWRAAAAAWAELDAPYERALALAQGDEAAQRAALEVLEQLGARPVASHVRDIMR HHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RNGVIRIARGPRRTTRANSAGLTQRQMEVLQLIERGLSNKRIAEHLAISPKTVDHHVSAV CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH LGKLDAVSRGEASAAARASGLI HHHHHHCCCCCHHHHHHHCCCC >Mature Secondary Structure MLLERQTQLAQLDELLAEAANGRGRVVALSGEAGAGKSALVEAFVGGVADGTRIFRSACE CCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH DLSIPDPLGPLYDLAREAQWAMPQAIDARQGQRVPLFSDALGVFEARTQPTLLVIEDLHW CCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCC ADDATLDFVRFLGRRIANTHILLALTARTDRSEGQMRVRRALGEIPAGNVVRIDVPLLSE CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHH AAVLLLANAAGRDGDAIYRATAGNAFFVTELLCADNEMTPPASVRDAVVARAERLSAGAR HHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH SMLDAVSVFPRRADAWALQGLCGVAAAGQLAECVSNGLLDDLGDGYAFRHEIARRAIEMM HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHH LTTSSRRLFNQRALSALLENGGVATARLVHHAVEAHNLQAVREFAPIAAREASRVGAHRD HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC AAGYYEVALRQADTLPQDERAGLYEHYAFECHLIARIDEAIKAQERARELQQALGNRLKE CCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GDSLRWLSRFAYLLGDRRAADMFGAQAVALLETVPASAELAMAYSNLSQLAMLAERLDET CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH LSLGARAIELAERLNRPEVVCHALNNVGAAEQWLDLGSSRLHLARSLEIALEQNFQEHAA HHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH RAFTNCACGEMNQLGYSQAQSFLDRGIDYCVENDLATWRDYMRGVRAQLLVRNGLWDDAA HHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHH AEALDVIANDRATALVRYPALVALSRLRVRRGDPSAEPLLAEMKRFLEKGAELQRLLPYA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHH AVMAELAWLGEADKDEALRLIDLAEGMSPTRAVFAELASWRQMLAPDADPGDTSAMAAPY HHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH RMLLAGDWRAAAAAWAELDAPYERALALAQGDEAAQRAALEVLEQLGARPVASHVRDIMR HHHHCCCHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHH RNGVIRIARGPRRTTRANSAGLTQRQMEVLQLIERGLSNKRIAEHLAISPKTVDHHVSAV CCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCHHHHHHHHH LGKLDAVSRGEASAAARASGLI HHHHHHCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA