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The map label for this gene is glxA [H]

Identifier: 13473789

GI number: 13473789

Start: 3580570

End: 3581538

Strand: Reverse

Name: glxA [H]

Synonym: mll4501

Alternate gene names: 13473789

Gene position: 3581538-3580570 (Counterclockwise)

Preceding gene: 13473790

Following gene: 13473788

Centisome position: 50.9

GC content: 66.87

Gene sequence:

>969_bases
ATGGCCACGCGCGAACCCGAAAAACCCACCGAACCCCTGACCTTCGCGGTGCTGGTGTTCCCCGGCTTTCCGATGATGGC
GTTCAGCTCCGTCATCGAGCCGCTGCGCGCCGCCAATGTTCTGGCGAAACGGCAATGCTATCGCTGGATCATCGTCGGCG
GCACGAAAGGGGCGGTCGAGGCGTCGAACGGCGTCGTCATTCAGCCGGGCTTTTATGCCGAGGATGCGCCGAAAGTCGAC
CGCATCGTCGTCTGCTCGGGCGGCGATGCCGACCATCTCGTCGCCGAGGACGCGGCGAGCTGGATCCGCCGCAGCCTGCG
GGGTGGCGCGCATATCGGCGCGGTGGCGGATGCGGCATTCTTCCTGGCGCGGGCCGGCTTGCTCGACGGCCATGCCTGCA
CCTTGCACTGGACCAGCCAGGCCGCCTTCACCGAGGCGTTCCCTAACATCGAGCTGCGGCGCGATCTCTACGTCATCGAC
CGCAAGCGCTTCACCTCGGCCGGCGGCGTCGGCAGCCTCGACATGATGCTGGAGATCATTACCCGCGACTATGGCGCCGA
GCTTGCCGCCGGCGTCGCCGAATGGTTCGTGCACAGCCAGCTGCGCTCCAGCGTCGACCGCAAGCTGATGCCGCTCAGGC
TGCGCACCGGCGTGCAGAACGAGTTGGTGCTGTCGGCCATTGCCATCATGGAAGACGCGGTCGAGGAGCGGCTCGGCATG
GCCGAGCTGACGGCCCGGCTCGGTGTCTCCTCCGACAAGCTCGAACGCAGCTTTCGCTCCGAACTCGCCATCTCGCCCAA
TGGCTACTACCGGCGGCTCAGGCTGAAGCGCGCCGCCGACCTTTTGGCGCATTCGACGCTCGCCGTGCGCGACGTGGCGC
TGGCCTGCGGCTTCGCCTCGATGTCGAGCTTTGCCCGGGCGTTTCGGGAAGAGCATGGCCATCCACCGAAACTGGCGCGG
AGGCATTAG

Upstream 100 bases:

>100_bases
CCTAGGATCCATGCCGCGACACCGGAGCGTCGCGACGGTCAAAGCTGATTTGCCCAATCGGCGTTGACGCCAAACCCCAT
TCGCCCGAGATGTAGCGCCC

Downstream 100 bases:

>100_bases
AGCTATCTTCGTCATCCTGGGGCGGAGCGTCGCGAAGCGGCGTGGAGACCCCTGGAGCTGCTCCGCAGCCCAAGGGATCC
ATGCCGCGACATCGGACGAA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MATREPEKPTEPLTFAVLVFPGFPMMAFSSVIEPLRAANVLAKRQCYRWIIVGGTKGAVEASNGVVIQPGFYAEDAPKVD
RIVVCSGGDADHLVAEDAASWIRRSLRGGAHIGAVADAAFFLARAGLLDGHACTLHWTSQAAFTEAFPNIELRRDLYVID
RKRFTSAGGVGSLDMMLEIITRDYGAELAAGVAEWFVHSQLRSSVDRKLMPLRLRTGVQNELVLSAIAIMEDAVEERLGM
AELTARLGVSSDKLERSFRSELAISPNGYYRRLRLKRAADLLAHSTLAVRDVALACGFASMSSFARAFREEHGHPPKLAR
RH

Sequences:

>Translated_322_residues
MATREPEKPTEPLTFAVLVFPGFPMMAFSSVIEPLRAANVLAKRQCYRWIIVGGTKGAVEASNGVVIQPGFYAEDAPKVD
RIVVCSGGDADHLVAEDAASWIRRSLRGGAHIGAVADAAFFLARAGLLDGHACTLHWTSQAAFTEAFPNIELRRDLYVID
RKRFTSAGGVGSLDMMLEIITRDYGAELAAGVAEWFVHSQLRSSVDRKLMPLRLRTGVQNELVLSAIAIMEDAVEERLGM
AELTARLGVSSDKLERSFRSELAISPNGYYRRLRLKRAADLLAHSTLAVRDVALACGFASMSSFARAFREEHGHPPKLAR
RH
>Mature_321_residues
ATREPEKPTEPLTFAVLVFPGFPMMAFSSVIEPLRAANVLAKRQCYRWIIVGGTKGAVEASNGVVIQPGFYAEDAPKVDR
IVVCSGGDADHLVAEDAASWIRRSLRGGAHIGAVADAAFFLARAGLLDGHACTLHWTSQAAFTEAFPNIELRRDLYVIDR
KRFTSAGGVGSLDMMLEIITRDYGAELAAGVAEWFVHSQLRSSVDRKLMPLRLRTGVQNELVLSAIAIMEDAVEERLGMA
ELTARLGVSSDKLERSFRSELAISPNGYYRRLRLKRAADLLAHSTLAVRDVALACGFASMSSFARAFREEHGHPPKLARR
H

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35265; Mature: 35134

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATREPEKPTEPLTFAVLVFPGFPMMAFSSVIEPLRAANVLAKRQCYRWIIVGGTKGAVE
CCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEE
ASNGVVIQPGFYAEDAPKVDRIVVCSGGDADHLVAEDAASWIRRSLRGGAHIGAVADAAF
CCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLARAGLLDGHACTLHWTSQAAFTEAFPNIELRRDLYVIDRKRFTSAGGVGSLDMMLEII
HHHHHCCCCCCEEEEEECCHHHHHHHCCCCEECCCEEEEEHHHHCCCCCCCHHHHHHHHH
TRDYGAELAAGVAEWFVHSQLRSSVDRKLMPLRLRTGVQNELVLSAIAIMEDAVEERLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
AELTARLGVSSDKLERSFRSELAISPNGYYRRLRLKRAADLLAHSTLAVRDVALACGFAS
HHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSSFARAFREEHGHPPKLARRH
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ATREPEKPTEPLTFAVLVFPGFPMMAFSSVIEPLRAANVLAKRQCYRWIIVGGTKGAVE
CCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCEE
ASNGVVIQPGFYAEDAPKVDRIVVCSGGDADHLVAEDAASWIRRSLRGGAHIGAVADAAF
CCCCEEECCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
FLARAGLLDGHACTLHWTSQAAFTEAFPNIELRRDLYVIDRKRFTSAGGVGSLDMMLEII
HHHHHCCCCCCEEEEEECCHHHHHHHCCCCEECCCEEEEEHHHHCCCCCCCHHHHHHHHH
TRDYGAELAAGVAEWFVHSQLRSSVDRKLMPLRLRTGVQNELVLSAIAIMEDAVEERLGM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCH
AELTARLGVSSDKLERSFRSELAISPNGYYRRLRLKRAADLLAHSTLAVRDVALACGFAS
HHHHHHHCCCHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSSFARAFREEHGHPPKLARRH
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]