Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13473756

Identifier: 13473756

GI number: 13473756

Start: 3543368

End: 3544297

Strand: Direct

Name: 13473756

Synonym: mlr4456

Alternate gene names: NA

Gene position: 3543368-3544297 (Clockwise)

Preceding gene: 13473755

Following gene: 13473757

Centisome position: 50.36

GC content: 61.83

Gene sequence:

>930_bases
ATGCCGTCCAAAGCACCCTCGGGCCTCATCCGAGGGTGTGCAGCGATTGAGATGCATGAAATAGGGTCGAATCGCACGAA
TCCCTCGCGATGCGCTTTCACCCCCGCCGCAACCATCAACCTCAGGACTTCAGCCATGCTCCCAACCAACAAGCAGTCTG
CCGGACCGAGCCAGAACAGGGTTCCGGAGGTCACGCTCGATTTCTGGCTGATCAAGCTGATGGCGGTCACCATGGGCGAG
ACGGCGGCCGACTATCTCGCCGTCAATCTCGGGCTCGGGCTGACCGTCACCTCGCTGATCATGACCGGCGTGCTGATCGT
CGCCCTTGGCCTGCAGTTCGCGCAGAAACGCTACGTGCCCTGGGCCTACTGGCTGGCGGTGGTGCTGATCAGCGTCGTCG
GCACGCTGATCACCGACAACCTCGTCGACACGTTCGGCGTGCGCCTGCAGACGACGACGATTGCCTTCTCGGTCGCGCTC
GCGGCGACTTTCGCGGTCTGGTACGCCAGCGAAAGAACATTGTCGATCCACACCATCTTCACGACGAGGCGGGAGATCTT
CTACTGGCTGGCGATCCTGTTCACCTTCTCGCTCGGCACCGCCGCCGGCGATCTCGTCGCCGAGAGTTTCGACATGGGCT
ATCTCACGTCGGGCCTTATGTTCGGCGGCGTCATCGCGCTGATCGCGCTTGCCTATTATCTCATCCACCTGGACGCCATC
CTCGCCTTCTGGCTGGCCTATATCCTGACGCGCCCGCTCGGCGCCTCCTTCGGCGATCTTCTGTCGCAACCGCTCGAATA
TGGCGGCCTCGGCTTCGGCACCACCTTCACCAGCCTGATCTTCCTGGGTTGCATCGCTGCACTCGTTCTCTACATGACGC
TGAAGAGAACGGCCGACGATGCCGACGAGATCCTGCTCGAATCGGACTGA

Upstream 100 bases:

>100_bases
GGAGCTGGAGACCAAGGGCATCGAACGCTGCAATGCCGATGACGACAAGCGCGCCGACGACTTCTTCGCCCAGGCCATGA
AAGTCATGGGCAAGTAGTCC

Downstream 100 bases:

>100_bases
CGGCGAGCACCGCAGCCGGCCTCGTTAGCGCCCAGGGCTCGACCATCCTAGGAACGGGGCCATGCCGGTGATAGCCTGTG
CCCGATATCGGCAATCAACC

Product: putative integral membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MPSKAPSGLIRGCAAIEMHEIGSNRTNPSRCAFTPAATINLRTSAMLPTNKQSAGPSQNRVPEVTLDFWLIKLMAVTMGE
TAADYLAVNLGLGLTVTSLIMTGVLIVALGLQFAQKRYVPWAYWLAVVLISVVGTLITDNLVDTFGVRLQTTTIAFSVAL
AATFAVWYASERTLSIHTIFTTRREIFYWLAILFTFSLGTAAGDLVAESFDMGYLTSGLMFGGVIALIALAYYLIHLDAI
LAFWLAYILTRPLGASFGDLLSQPLEYGGLGFGTTFTSLIFLGCIAALVLYMTLKRTADDADEILLESD

Sequences:

>Translated_309_residues
MPSKAPSGLIRGCAAIEMHEIGSNRTNPSRCAFTPAATINLRTSAMLPTNKQSAGPSQNRVPEVTLDFWLIKLMAVTMGE
TAADYLAVNLGLGLTVTSLIMTGVLIVALGLQFAQKRYVPWAYWLAVVLISVVGTLITDNLVDTFGVRLQTTTIAFSVAL
AATFAVWYASERTLSIHTIFTTRREIFYWLAILFTFSLGTAAGDLVAESFDMGYLTSGLMFGGVIALIALAYYLIHLDAI
LAFWLAYILTRPLGASFGDLLSQPLEYGGLGFGTTFTSLIFLGCIAALVLYMTLKRTADDADEILLESD
>Mature_308_residues
PSKAPSGLIRGCAAIEMHEIGSNRTNPSRCAFTPAATINLRTSAMLPTNKQSAGPSQNRVPEVTLDFWLIKLMAVTMGET
AADYLAVNLGLGLTVTSLIMTGVLIVALGLQFAQKRYVPWAYWLAVVLISVVGTLITDNLVDTFGVRLQTTTIAFSVALA
ATFAVWYASERTLSIHTIFTTRREIFYWLAILFTFSLGTAAGDLVAESFDMGYLTSGLMFGGVIALIALAYYLIHLDAIL
AFWLAYILTRPLGASFGDLLSQPLEYGGLGFGTTFTSLIFLGCIAALVLYMTLKRTADDADEILLESD

Specific function: Unknown

COG id: COG4705

COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33426; Mature: 33295

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKAPSGLIRGCAAIEMHEIGSNRTNPSRCAFTPAATINLRTSAMLPTNKQSAGPSQNR
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECEECCCCCCCCCCCCCC
VPEVTLDFWLIKLMAVTMGETAADYLAVNLGLGLTVTSLIMTGVLIVALGLQFAQKRYVP
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WAYWLAVVLISVVGTLITDNLVDTFGVRLQTTTIAFSVALAATFAVWYASERTLSIHTIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
TTRREIFYWLAILFTFSLGTAAGDLVAESFDMGYLTSGLMFGGVIALIALAYYLIHLDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFWLAYILTRPLGASFGDLLSQPLEYGGLGFGTTFTSLIFLGCIAALVLYMTLKRTADD
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADEILLESD
HHHHHCCCC
>Mature Secondary Structure 
PSKAPSGLIRGCAAIEMHEIGSNRTNPSRCAFTPAATINLRTSAMLPTNKQSAGPSQNR
CCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCEEEEEECEECCCCCCCCCCCCCC
VPEVTLDFWLIKLMAVTMGETAADYLAVNLGLGLTVTSLIMTGVLIVALGLQFAQKRYVP
CCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
WAYWLAVVLISVVGTLITDNLVDTFGVRLQTTTIAFSVALAATFAVWYASERTLSIHTIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEEEHH
TTRREIFYWLAILFTFSLGTAAGDLVAESFDMGYLTSGLMFGGVIALIALAYYLIHLDAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAFWLAYILTRPLGASFGDLLSQPLEYGGLGFGTTFTSLIFLGCIAALVLYMTLKRTADD
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ADEILLESD
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA